RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, human

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFC-208	ENST00000512711	ZCCHC2	Q9C0B9	1178 aa	Known RBP	5.24	□□□□□ -1.57
PDGFC-208	ENST00000512711	CRISPLD1	Q9H336	500 aa		5.24	□□□□□ -1.57
PDGFC-208	ENST00000512711	ENAM	Q9NRM1	1142 aa		5.24	□□□□□ -1.57
PDGFC-208	ENST00000512711	NDFIP2	Q9NV92	336 aa		5.24	□□□□□ -1.57
PDGFC-208	ENST00000512711	DNAAF2	Q9NVR5	837 aa	Known RBP	5.24	□□□□□ -1.57
PDGFC-208	ENST00000512711	USP17L3	A6NCW0	530 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	USP17L4	A6NCW7	530 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	LZTS3	O60299	673 aa	Predicted RBP	5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	CSB-PGBD3	P0DP91	1061 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	BCR	P11274	1271 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	EPHA4	P54764	986 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	PSME1	Q06323	249 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	SH3PXD2A	Q5TCZ1	1133 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	USP17L2	Q6R6M4	530 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	USP17L1	Q7RTZ2	530 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	WWC1	Q8IX03	1113 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	PGBD3	Q8N328	593 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	C7orf43	Q8WVR3	580 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	SPOCK3	Q9BQ16	436 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	CABP1	Q9NZU7	370 aa		5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	SCHIP1	Q9P0W5	487 aa	Predicted RBP	5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711	TFIP11	Q9UBB9	837 aa	Known RBP	5.23	□□□□□ -1.57
PDGFC-208	ENST00000512711		A0A1W2PNR3	127 aa		5.22	□□□□□ -1.57
PDGFC-208	ENST00000512711	SHISA8	B8ZZ34	492 aa		5.22	□□□□□ -1.57
PDGFC-208	ENST00000512711	DKK1	O94907	266 aa		5.22	□□□□□ -1.57
PDGFC-208	ENST00000512711	TXLNA	P40222	546 aa		5.22	□□□□□ -1.57
PDGFC-208	ENST00000512711	ARSJ	Q5FYB0	599 aa	Predicted RBP	5.22	□□□□□ -1.57
PDGFC-208	ENST00000512711	CCDC102B	Q68D86	513 aa		5.22	□□□□□ -1.57
PDGFC-208	ENST00000512711	BEND7	Q8N7W2	519 aa	Predicted RBP	5.22	□□□□□ -1.57
PDGFC-208	ENST00000512711	ZIC5	Q96T25	663 aa		5.22	□□□□□ -1.57
PDGFC-208	ENST00000512711	MKRN1	Q9UHC7	482 aa	Known RBP	5.22	□□□□□ -1.57
PDGFC-208	ENST00000512711	PHF20L1	A8MW92	1017 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	OIP5	O43482	229 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	ATP9B	O43861	1147 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	SNRPN	P63162	240 aa	Known RBP	5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	EFHC2	Q5JST6	749 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	PROSER2	Q86WR7	435 aa	Predicted RBP	5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	OGFOD1	Q8N543	542 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	GALNT6	Q8NCL4	622 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	TPCN2	Q8NHX9	752 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	GAS2L2	Q8NHY3	880 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	GLMN	Q92990	594 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	L3MBTL2	Q969R5	705 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	OXCT2	Q9BYC2	517 aa	Predicted RBP	5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	KLF15	Q9UIH9	416 aa		5.21	□□□□□ -1.58
PDGFC-208	ENST00000512711	SFI1	A8K8P3	1242 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	LGR5	O75473	907 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	PROC	P04070	461 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	FGFR3	P22607	806 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	NOS2	P35228	1153 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	TNP2	Q05952	138 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	LBR	Q14739	615 aa	Known RBP	5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	GRIN2C	Q14957	1233 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	SLC9A9	Q8IVB4	645 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	PLEKHM2	Q8IWE5	1019 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	NEDD1	Q8NHV4	660 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	STRN4	Q9NRL3	753 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	PCDHGC4	Q9Y5F7	938 aa		5.2	□□□□□ -1.58
PDGFC-208	ENST00000512711	DCDC2B	A2VCK2	349 aa		5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	BACH1	O14867	736 aa		5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	ATXN7	O15265	892 aa	Predicted RBP	5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	MAPT	P10636	758 aa	Known RBP	5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	CD33	P20138	364 aa		5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	TSEN2	Q8NCE0	465 aa	Known RBP	5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	ZNF594	Q96JF6	807 aa	Predicted RBP	5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	GGA1	Q9UJY5	639 aa		5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	PHF24	Q9UPV7	400 aa		5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	HCN4	Q9Y3Q4	1203 aa		5.19	□□□□□ -1.58
PDGFC-208	ENST00000512711	PALM3	A6NDB9	673 aa	Predicted RBP	5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711		A6NJR5	290 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	C21orf2	O43822	256 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	BMP4	P12644	408 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	HOXB4	P17483	251 aa	Predicted RBP	5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	MAP2K3	P46734	347 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	TEAD4	Q15561	434 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	LRRC69	Q6ZNQ3	347 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	NLRP8	Q86W28	1048 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	TRIM50	Q86XT4	487 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	LARGE2	Q8N3Y3	721 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	C1orf216	Q8TAB5	229 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	EDARADD	Q8WWZ3	215 aa		5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	ZNF777	Q9ULD5	760 aa	Predicted RBP	5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	NSFL1C	Q9UNZ2	370 aa	Known RBP	5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	MAFB	Q9Y5Q3	323 aa	Predicted RBP	5.18	□□□□□ -1.58
PDGFC-208	ENST00000512711	EML1	O00423	815 aa		5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	KHNYN	O15037	678 aa	Known RBP	5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	RASA1	P20936	1047 aa		5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	NBPF1	Q3BBV0	1214 aa		5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	KANK4	Q5T7N3	995 aa	Predicted RBP	5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	BICDL1	Q6ZP65	573 aa		5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	CALR3	Q96L12	384 aa	Known RBP	5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	PPP1R12C	Q9BZL4	782 aa		5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	ZDHHC3	Q9NYG2	299 aa		5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	ZNF232	Q9UNY5	417 aa		5.17	□□□□□ -1.58
PDGFC-208	ENST00000512711	NEURL1B	A8MQ27	555 aa		5.16	□□□□□ -1.58
PDGFC-208	ENST00000512711	TAT	P17735	454 aa	Predicted RBP	5.16	□□□□□ -1.58
PDGFC-208	ENST00000512711	ATP1A2	P50993	1020 aa		5.16	□□□□□ -1.58
PDGFC-208	ENST00000512711	PCBP4	P57723	403 aa	Known RBP	5.16	□□□□□ -1.58

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