RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 DNAJB2P25686 324 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 PRSS12P56730 875 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 POU5F1BQ06416 359 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 MYBPC2Q14324 1141 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 PPP2R5AQ15172 486 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 MAP7D1Q3KQU3 841 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 C6orf132Q5T0Z8 1188 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 HS2ST1Q7LGA3 356 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 PCGF5Q86SE9 256 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 SAMD3Q8N6K7 520 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 PAF1Q8N7H5 531 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 PTCD2Q8WV60 388 aaKnown RBP4.27□□□□□ -1.73
PVT1-202ENST00000512617 PPM1EQ8WY54 764 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 TSR2Q969E8 191 aaKnown RBP4.27□□□□□ -1.73
PVT1-202ENST00000512617 CITED4Q96RK1 184 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 APBA2Q99767 749 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 HINFPQ9BQA5 517 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 TMEM121BQ9BXQ6 578 aaPredicted RBP4.27□□□□□ -1.73
PVT1-202ENST00000512617 TRIM55Q9BYV6 548 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 NEUROD4Q9HD90 331 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 THRAP3Q9Y2W1 955 aaKnown RBP4.27□□□□□ -1.73
PVT1-202ENST00000512617 BOLA1Q9Y3E2 137 aa4.27□□□□□ -1.73
PVT1-202ENST00000512617 IFRD1O00458 451 aaPredicted RBP4.26□□□□□ -1.73
PVT1-202ENST00000512617 NRDCO43847 1150 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 DKK1O94907 266 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 FOSP01100 380 aaPredicted RBP4.26□□□□□ -1.73
PVT1-202ENST00000512617 PRKAR2AP13861 404 aaKnown RBP4.26□□□□□ -1.73
PVT1-202ENST00000512617 CALRP27797 417 aaKnown RBP4.26□□□□□ -1.73
PVT1-202ENST00000512617 GNA15P30679 374 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 NOS2P35228 1153 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 USP5P45974 858 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 GJA8P48165 433 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 EXOSC10Q01780 885 aaKnown RBP4.26□□□□□ -1.73
PVT1-202ENST00000512617 CBLBQ13191 982 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 AAMPQ13685 434 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 VPS72Q15906 364 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 ALG1LQ6GMV1 187 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 CACTIN-AS1Q8N1I8 211 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 SH3TC2Q8TF17 1288 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 HLA-CQ95604 372 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 GPRASP2Q96D09 838 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 CDCA7LQ96GN5 454 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 ZNF512BQ96KM6 892 aaPredicted RBP4.26□□□□□ -1.73
PVT1-202ENST00000512617 EYA1Q99502 592 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 C12orf49Q9H741 205 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 SRA1Q9HD15 236 aaKnown RBP4.26□□□□□ -1.73
PVT1-202ENST00000512617 SNTG2Q9NY99 539 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 CEP126Q9P2H0 1117 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 GGT7Q9UJ14 662 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 KIAA1024Q9UPX6 916 aa4.26□□□□□ -1.73
PVT1-202ENST00000512617 ATAD2BQ9ULI0 1458 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 SMARCA4P51532 1647 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 SFI1A8K8P3 1242 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 NPHP1O15259 732 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 PER1O15534 1290 aaPredicted RBP4.25□□□□□ -1.73
PVT1-202ENST00000512617 LGR5O75473 907 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 HCLS1P14317 486 aaPredicted RBP4.25□□□□□ -1.73
PVT1-202ENST00000512617 NPR3P17342 541 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 MPSTP25325 297 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 MAN1A1P33908 653 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 GCGRP47871 477 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 PAK2Q13177 524 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 FKBP5Q13451 457 aaPredicted RBP4.25□□□□□ -1.73
PVT1-202ENST00000512617 NAA30Q147X3 362 aaPredicted RBP4.25□□□□□ -1.73
PVT1-202ENST00000512617 SYCP2LQ5T4T6 812 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 CCDC102BQ68D86 513 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.25□□□□□ -1.73
PVT1-202ENST00000512617 RINLQ6ZS11 566 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 CAPN12Q6ZSI9 719 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 HOMER1Q86YM7 354 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 PDILTQ8N807 584 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 TPCN2Q8NHX9 752 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 JPH4Q96JJ6 628 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 DEPDC7Q96QD5 511 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 SETDB2Q96T68 719 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 PAGR1Q9BTK6 254 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 PEG3Q9GZU2 1588 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 MAP3K20Q9NYL2 800 aaKnown RBP4.25□□□□□ -1.73
PVT1-202ENST00000512617 SCINQ9Y6U3 715 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 HMGXB3Q12766 1538 aa4.25□□□□□ -1.73
PVT1-202ENST00000512617 PNMA6FA0A0J9YX94 578 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 CFAP69A5D8W1 941 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 ZBTB7BO15156 539 aaPredicted RBP4.24□□□□□ -1.73
PVT1-202ENST00000512617 GPR182O15218 404 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 ZBTB24O43167 697 aaPredicted RBP4.24□□□□□ -1.73
PVT1-202ENST00000512617 RGS20O76081 388 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 FGAP02671 866 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 MYL1P05976 194 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 COPB2P35606 906 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 MASP1P48740 699 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 GTF2IP78347 998 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 PTPN12Q05209 780 aaKnown RBP4.24□□□□□ -1.73
PVT1-202ENST00000512617 NFX1Q12986 1120 aaKnown RBP4.24□□□□□ -1.73
PVT1-202ENST00000512617 TTC39BQ5VTQ0 682 aaPredicted RBP4.24□□□□□ -1.73
PVT1-202ENST00000512617 ANKS3Q6ZW76 656 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 RAVER1Q8IY67 606 aaKnown RBP4.24□□□□□ -1.73
PVT1-202ENST00000512617 PHTF2Q8N3S3 785 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 CEP63Q96MT8 703 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 ARPC5LQ9BPX5 153 aa4.24□□□□□ -1.73
PVT1-202ENST00000512617 INO80BQ9C086 356 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms