RNA–Protein interactions for RNA: ENST00000512454.5

EXOSC9-211, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-211ENST00000512454 MYH16Q9H6N6 1097 aa11.31□□□□□ -0.6
EXOSC9-211ENST00000512454 CACNA1FO60840 1977 aa11.31□□□□□ -0.6
EXOSC9-211ENST00000512454 KAT6BQ8WYB5 2073 aa11.31□□□□□ -0.6
EXOSC9-211ENST00000512454 TATP17735 454 aaPredicted RBP11.3□□□□□ -0.6
EXOSC9-211ENST00000512454 RTF1Q92541 710 aaKnown RBP11.3□□□□□ -0.6
EXOSC9-211ENST00000512454 BCL9LQ86UU0 1499 aa11.3□□□□□ -0.6
EXOSC9-211ENST00000512454 SLC34A2O95436 690 aa11.3□□□□□ -0.6
EXOSC9-211ENST00000512454 ZNF530Q6P9A1 599 aaPredicted RBP11.3□□□□□ -0.6
EXOSC9-211ENST00000512454 IFT57Q9NWB7 429 aa11.3□□□□□ -0.6
EXOSC9-211ENST00000512454 SPG7Q9UQ90 795 aa11.3□□□□□ -0.6
EXOSC9-211ENST00000512454 DISP2A7MBM2 1401 aa11.29□□□□□ -0.6
EXOSC9-211ENST00000512454 CEMIPQ8WUJ3 1361 aa11.29□□□□□ -0.6
EXOSC9-211ENST00000512454 FANCIQ9NVI1 1328 aa11.29□□□□□ -0.6
EXOSC9-211ENST00000512454 IL2RBP14784 551 aa11.29□□□□□ -0.6
EXOSC9-211ENST00000512454 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
EXOSC9-211ENST00000512454 C1orf141Q5JVX7 400 aa11.29□□□□□ -0.6
EXOSC9-211ENST00000512454 MCM10Q7L590 875 aa11.29□□□□□ -0.6
EXOSC9-211ENST00000512454 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
EXOSC9-211ENST00000512454 THUMPD2Q9BTF0 503 aaKnown RBP11.29□□□□□ -0.6
EXOSC9-211ENST00000512454 ITGB4P16144 1822 aa11.28□□□□□ -0.6
EXOSC9-211ENST00000512454 ZNF853P0CG23 659 aa11.28□□□□□ -0.6
EXOSC9-211ENST00000512454 GNAI1P63096 354 aa11.28□□□□□ -0.6
EXOSC9-211ENST00000512454 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
EXOSC9-211ENST00000512454 TMC2Q8TDI7 906 aa11.28□□□□□ -0.6
EXOSC9-211ENST00000512454 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
EXOSC9-211ENST00000512454 MRC1P22897 1456 aa11.27□□□□□ -0.6
EXOSC9-211ENST00000512454 PCDH11XQ9BZA7 1347 aa11.27□□□□□ -0.61
EXOSC9-211ENST00000512454 PCDH11YQ9BZA8 1340 aa11.27□□□□□ -0.61
EXOSC9-211ENST00000512454 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
EXOSC9-211ENST00000512454 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
EXOSC9-211ENST00000512454 NGLY1Q96IV0 654 aa11.27□□□□□ -0.61
EXOSC9-211ENST00000512454 THRAP3Q9Y2W1 955 aaKnown RBP11.27□□□□□ -0.61
EXOSC9-211ENST00000512454 TOGARAM1Q9Y4F4 1720 aa11.27□□□□□ -0.61
EXOSC9-211ENST00000512454 SPATA31A1Q5TZJ5 1347 aa11.26□□□□□ -0.61
EXOSC9-211ENST00000512454 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
EXOSC9-211ENST00000512454 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
EXOSC9-211ENST00000512454 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
EXOSC9-211ENST00000512454 TSR2Q969E8 191 aaKnown RBP11.26□□□□□ -0.61
EXOSC9-211ENST00000512454 RNF166Q96A37 237 aaPredicted RBP11.26□□□□□ -0.61
EXOSC9-211ENST00000512454 USP35Q9P2H5 1018 aa11.26□□□□□ -0.61
EXOSC9-211ENST00000512454 EP400Q96L91 3159 aa11.26□□□□□ -0.61
EXOSC9-211ENST00000512454 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
EXOSC9-211ENST00000512454 NUDT7P0C024 238 aa11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 PHKG2P15735 406 aa11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 IFNL2Q8IZJ0 200 aa11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 PCDHGA4Q9Y5G9 962 aa11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 THSD7AQ9UPZ6 1657 aa11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 KDM6AO15550 1401 aaPredicted RBP11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 CYP27B1O15528 508 aa11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 CT47B1P0C2W7 299 aaPredicted RBP11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 ZCRB1Q8TBF4 217 aaKnown RBP11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 CDCA7Q9BWT1 371 aaPredicted RBP11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 MBIPQ9NS73 344 aa11.25□□□□□ -0.61
EXOSC9-211ENST00000512454 PAPPAQ13219 1627 aa11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 UBR2Q8IWV8 1755 aa11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 DOT1LQ8TEK3 1739 aa11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 CHL1O00533 1208 aa11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 HSP90AB1P08238 724 aaKnown RBP11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 VPS72Q15906 364 aa11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 MPRIPQ6WCQ1 1025 aa11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 LAS1LQ9Y4W2 734 aaKnown RBP11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 GLI3P10071 1580 aa11.24□□□□□ -0.61
EXOSC9-211ENST00000512454 RNMTO43148 476 aaKnown RBP11.23□□□□□ -0.61
EXOSC9-211ENST00000512454 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
EXOSC9-211ENST00000512454 DCAF5Q96JK2 942 aa11.23□□□□□ -0.61
EXOSC9-211ENST00000512454 USP21Q9UK80 565 aa11.23□□□□□ -0.61
EXOSC9-211ENST00000512454 SUPT16HQ9Y5B9 1047 aaKnown RBP11.23□□□□□ -0.61
EXOSC9-211ENST00000512454 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
EXOSC9-211ENST00000512454 TEFQ10587 303 aa11.22□□□□□ -0.61
EXOSC9-211ENST00000512454 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
EXOSC9-211ENST00000512454 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
EXOSC9-211ENST00000512454 HS6ST3Q8IZP7 471 aa11.22□□□□□ -0.61
EXOSC9-211ENST00000512454 FBXO41Q8TF61 875 aa11.22□□□□□ -0.61
EXOSC9-211ENST00000512454 LGR6Q9HBX8 967 aa11.22□□□□□ -0.61
EXOSC9-211ENST00000512454 AFF2P51816 1311 aa11.22□□□□□ -0.61
EXOSC9-211ENST00000512454 ATRNO75882 1429 aa11.21□□□□□ -0.61
EXOSC9-211ENST00000512454 EXOSC9Q06265 439 aaKnown RBP11.21□□□□□ -0.61
EXOSC9-211ENST00000512454 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
EXOSC9-211ENST00000512454 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.61
EXOSC9-211ENST00000512454 LHX6Q9UPM6 363 aa11.21□□□□□ -0.61
EXOSC9-211ENST00000512454 CCDC9Q9Y3X0 531 aaKnown RBP11.21□□□□□ -0.61
EXOSC9-211ENST00000512454 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.62
EXOSC9-211ENST00000512454 PTGER2P43116 358 aa11.2□□□□□ -0.62
EXOSC9-211ENST00000512454 ZNF428Q96B54 188 aa11.2□□□□□ -0.62
EXOSC9-211ENST00000512454 C5P01031 1676 aa11.2□□□□□ -0.62
EXOSC9-211ENST00000512454 LSM11P83369 360 aaKnown RBP eCLIP11.19□□□□□ -0.62
EXOSC9-211ENST00000512454 SLC52A2Q9HAB3 445 aa11.19□□□□□ -0.62
EXOSC9-211ENST00000512454 BRWD3Q6RI45 1802 aa11.19□□□□□ -0.62
EXOSC9-211ENST00000512454 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
EXOSC9-211ENST00000512454 EXOC5O00471 708 aa11.19□□□□□ -0.62
EXOSC9-211ENST00000512454 NEFLP07196 543 aa11.19□□□□□ -0.62
EXOSC9-211ENST00000512454 RARSP54136 660 aaKnown RBP11.19□□□□□ -0.62
EXOSC9-211ENST00000512454 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
EXOSC9-211ENST00000512454 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
EXOSC9-211ENST00000512454 BTBD11A6QL63 1104 aa11.18□□□□□ -0.62
EXOSC9-211ENST00000512454 ERVV-2B6SEH9 535 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms