RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 CRB1P82279 1406 aa16.99■□□□□ 0.31
SNCAIP-217ENST00000512385 BTG4Q9NY30 223 aa16.98■□□□□ 0.31
SNCAIP-217ENST00000512385 PHRF1Q9P1Y6 1649 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-217ENST00000512385 CAMTA1Q9Y6Y1 1673 aa16.98■□□□□ 0.31
SNCAIP-217ENST00000512385 SYCE3A1L190 88 aa16.98■□□□□ 0.31
SNCAIP-217ENST00000512385 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-217ENST00000512385 APBB1O00213 710 aa16.97■□□□□ 0.31
SNCAIP-217ENST00000512385 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-217ENST00000512385 RAPGEF4Q8WZA2 1011 aa16.97■□□□□ 0.31
SNCAIP-217ENST00000512385 EVA1CP58658 441 aa16.97■□□□□ 0.31
SNCAIP-217ENST00000512385 ZNF445P59923 1031 aa16.97■□□□□ 0.31
SNCAIP-217ENST00000512385 OTUD7AQ8TE49 926 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-217ENST00000512385 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-217ENST00000512385 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
SNCAIP-217ENST00000512385 EP400Q96L91 3159 aa16.96■□□□□ 0.31
SNCAIP-217ENST00000512385 FOXD4L6Q3SYB3 417 aaPredicted RBP16.96■□□□□ 0.31
SNCAIP-217ENST00000512385 FOXD4L3Q6VB84 417 aaPredicted RBP16.96■□□□□ 0.31
SNCAIP-217ENST00000512385 TPRNQ4KMQ1 711 aa16.96■□□□□ 0.31
SNCAIP-217ENST00000512385 TMEM63CQ9P1W3 806 aa16.96■□□□□ 0.31
SNCAIP-217ENST00000512385 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
SNCAIP-217ENST00000512385 MEGF6O75095 1541 aa16.96■□□□□ 0.3
SNCAIP-217ENST00000512385 FAM177BA6PVY3 158 aa16.95■□□□□ 0.3
SNCAIP-217ENST00000512385 PLEKHO1Q53GL0 409 aaPredicted RBP16.95■□□□□ 0.3
SNCAIP-217ENST00000512385 ZDHHC9Q9Y397 364 aa16.95■□□□□ 0.3
SNCAIP-217ENST00000512385 IPO8O15397 1037 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-217ENST00000512385 PDLIM2Q96JY6 352 aa16.94■□□□□ 0.3
SNCAIP-217ENST00000512385 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
SNCAIP-217ENST00000512385 SLC39A6Q13433 755 aa16.94■□□□□ 0.3
SNCAIP-217ENST00000512385 CT47B1P0C2W7 299 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 C1orf141Q5JVX7 400 aa16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 CLEC17AQ6ZS10 378 aa16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 DDX54Q8TDD1 881 aaKnown RBP16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 ZKSCAN5Q9Y2L8 839 aa16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 COL18A1P39060 1754 aa16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 A0A0U1RQG5 324 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 CYP27B1O15528 508 aa16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 ZNF500O60304 480 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 TOM1O60784 492 aa16.93■□□□□ 0.3
SNCAIP-217ENST00000512385 PTMSP20962 102 aa16.92■□□□□ 0.3
SNCAIP-217ENST00000512385 CDC45O75419 566 aa16.92■□□□□ 0.3
SNCAIP-217ENST00000512385 CPDO75976 1380 aa16.92■□□□□ 0.3
SNCAIP-217ENST00000512385 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
SNCAIP-217ENST00000512385 ZNF830Q96NB3 372 aaPredicted RBP16.92■□□□□ 0.3
SNCAIP-217ENST00000512385 PODXL2Q9NZ53 605 aa16.92■□□□□ 0.3
SNCAIP-217ENST00000512385 CRYBG1Q9Y4K1 1723 aa16.92■□□□□ 0.3
SNCAIP-217ENST00000512385 ANXA1P04083 346 aa16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 CYP2E1P05181 493 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 TATP17735 454 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 EIF2S2P20042 333 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 TAF7Q15545 349 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 G2E3Q7L622 706 aa16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 TEFQ10587 303 aa16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 C17orf53Q8N3J3 647 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 MRPL50Q8N5N7 158 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 IBTKQ9P2D0 1353 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-217ENST00000512385 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
SNCAIP-217ENST00000512385 PLEKHM2Q8IWE5 1019 aa16.9■□□□□ 0.3
SNCAIP-217ENST00000512385 NFATC2IPQ8NCF5 419 aa16.9■□□□□ 0.3
SNCAIP-217ENST00000512385 NHSL1Q5SYE7 1610 aa16.9■□□□□ 0.3
SNCAIP-217ENST00000512385 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
SNCAIP-217ENST00000512385 SMARCA5O60264 1052 aaPredicted RBP16.89■□□□□ 0.3
SNCAIP-217ENST00000512385 SLC4A2P04920 1241 aa16.89■□□□□ 0.3
SNCAIP-217ENST00000512385 GCC1Q96CN9 775 aa16.89■□□□□ 0.3
SNCAIP-217ENST00000512385 USP26Q9BXU7 913 aa16.89■□□□□ 0.3
SNCAIP-217ENST00000512385 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
SNCAIP-217ENST00000512385 COL5A2P05997 1499 aaPredicted RBP16.89■□□□□ 0.29
SNCAIP-217ENST00000512385 F6X3S4 739 aa16.88■□□□□ 0.29
SNCAIP-217ENST00000512385 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
SNCAIP-217ENST00000512385 PHKG2P15735 406 aa16.88■□□□□ 0.29
SNCAIP-217ENST00000512385 NUCB2P80303 420 aa16.88■□□□□ 0.29
SNCAIP-217ENST00000512385 RABEP1Q15276 862 aa16.87■□□□□ 0.29
SNCAIP-217ENST00000512385 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
SNCAIP-217ENST00000512385 KAT6BQ8WYB5 2073 aa16.87■□□□□ 0.29
SNCAIP-217ENST00000512385 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
SNCAIP-217ENST00000512385 TERF1P54274 439 aa16.87■□□□□ 0.29
SNCAIP-217ENST00000512385 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
SNCAIP-217ENST00000512385 PTMAP06454 111 aaKnown RBP16.86■□□□□ 0.29
SNCAIP-217ENST00000512385 LRSAM1Q6UWE0 723 aa16.86■□□□□ 0.29
SNCAIP-217ENST00000512385 HS1BP3Q53T59 392 aa16.85■□□□□ 0.29
SNCAIP-217ENST00000512385 DNTTIP2Q5QJE6 756 aaKnown RBP16.85■□□□□ 0.29
SNCAIP-217ENST00000512385 HTATSF1O43719 755 aaKnown RBP16.85■□□□□ 0.29
SNCAIP-217ENST00000512385 NCAPD2Q15021 1401 aa16.85■□□□□ 0.29
SNCAIP-217ENST00000512385 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 FAM208AQ9UK61 1670 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 PHAXQ9H814 394 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 SPG7Q9UQ90 795 aa16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 KDM6AO15550 1401 aaPredicted RBP16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 SDSP20132 328 aa16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 EIF4A1P60842 406 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 SLC4A10Q6U841 1118 aa16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 ABCA3Q99758 1704 aa16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-217ENST00000512385 IL2RBP14784 551 aa16.83■□□□□ 0.28
SNCAIP-217ENST00000512385 SASS6Q6UVJ0 657 aa16.83■□□□□ 0.28
SNCAIP-217ENST00000512385 IFNL2Q8IZJ0 200 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms