RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 CALD1Q05682 793 aaKnown RBP13.56□□□□□ -0.24
HOXA4-203ENST00000511914 LMOD3Q0VAK6 560 aa13.56□□□□□ -0.24
HOXA4-203ENST00000511914 NFE2L2Q16236 605 aa13.56□□□□□ -0.24
HOXA4-203ENST00000511914 IGSF1Q8N6C5 1336 aa13.56□□□□□ -0.24
HOXA4-203ENST00000511914 ATP10DQ9P241 1426 aa13.56□□□□□ -0.24
HOXA4-203ENST00000511914 CYP27B1O15528 508 aa13.55□□□□□ -0.24
HOXA4-203ENST00000511914 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
HOXA4-203ENST00000511914 ZNF526Q8TF50 670 aaPredicted RBP13.55□□□□□ -0.24
HOXA4-203ENST00000511914 RCAN3Q9UKA8 241 aa13.55□□□□□ -0.24
HOXA4-203ENST00000511914 RIPK4P57078 832 aa13.54□□□□□ -0.24
HOXA4-203ENST00000511914 AK7Q96M32 723 aa13.54□□□□□ -0.24
HOXA4-203ENST00000511914 MYH16Q9H6N6 1097 aa13.54□□□□□ -0.24
HOXA4-203ENST00000511914 HMOX1P09601 288 aa13.53□□□□□ -0.24
HOXA4-203ENST00000511914 CT47B1P0C2W7 299 aaPredicted RBP13.53□□□□□ -0.24
HOXA4-203ENST00000511914 SULT6B1Q6IMI4 303 aa13.53□□□□□ -0.24
HOXA4-203ENST00000511914 DCBLD2Q96PD2 775 aa13.53□□□□□ -0.24
HOXA4-203ENST00000511914 EYA1Q99502 592 aa13.53□□□□□ -0.24
HOXA4-203ENST00000511914 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
HOXA4-203ENST00000511914 CD2APQ9Y5K6 639 aa13.53□□□□□ -0.24
HOXA4-203ENST00000511914 CEP350Q5VT06 3117 aa13.53□□□□□ -0.24
HOXA4-203ENST00000511914 NEUROD2Q15784 382 aa13.52□□□□□ -0.25
HOXA4-203ENST00000511914 FLAD1Q8NFF5 587 aa13.52□□□□□ -0.25
HOXA4-203ENST00000511914 PHACTR3Q96KR7 559 aa13.52□□□□□ -0.25
HOXA4-203ENST00000511914 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.25
HOXA4-203ENST00000511914 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
HOXA4-203ENST00000511914 RRP7AQ9Y3A4 280 aaKnown RBP13.52□□□□□ -0.25
HOXA4-203ENST00000511914 N4BP2Q86UW6 1770 aaPredicted RBP13.51□□□□□ -0.25
HOXA4-203ENST00000511914 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.51□□□□□ -0.25
HOXA4-203ENST00000511914 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
HOXA4-203ENST00000511914 PIGBQ92521 554 aa13.51□□□□□ -0.25
HOXA4-203ENST00000511914 PLEKHG2Q9H7P9 1386 aa13.5□□□□□ -0.25
HOXA4-203ENST00000511914 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
HOXA4-203ENST00000511914 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
HOXA4-203ENST00000511914 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
HOXA4-203ENST00000511914 FKBP8Q14318 412 aa13.49□□□□□ -0.25
HOXA4-203ENST00000511914 LINC00116Q8NCU8 138 aa13.49□□□□□ -0.25
HOXA4-203ENST00000511914 GAS2L2Q8NHY3 880 aa13.49□□□□□ -0.25
HOXA4-203ENST00000511914 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
HOXA4-203ENST00000511914 ADCY9O60503 1353 aa13.47□□□□□ -0.25
HOXA4-203ENST00000511914 LOC102724428A0A0B4J2F2 783 aa13.47□□□□□ -0.25
HOXA4-203ENST00000511914 SIK1P57059 783 aa13.47□□□□□ -0.25
HOXA4-203ENST00000511914 TMOD3Q9NYL9 352 aa13.47□□□□□ -0.25
HOXA4-203ENST00000511914 ASAP1Q9ULH1 1129 aa13.47□□□□□ -0.25
HOXA4-203ENST00000511914 SPG7Q9UQ90 795 aa13.47□□□□□ -0.25
HOXA4-203ENST00000511914 KIAA1551Q9HCM1 1747 aa13.47□□□□□ -0.25
HOXA4-203ENST00000511914 KIF13BQ9NQT8 1826 aa13.46□□□□□ -0.25
HOXA4-203ENST00000511914 GNPATO15228 680 aa13.46□□□□□ -0.25
HOXA4-203ENST00000511914 HMGB2P26583 209 aaKnown RBP13.46□□□□□ -0.25
HOXA4-203ENST00000511914 SSFA2P28290 1259 aa13.46□□□□□ -0.25
HOXA4-203ENST00000511914 ATP6V1AP38606 617 aa13.46□□□□□ -0.25
HOXA4-203ENST00000511914 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
HOXA4-203ENST00000511914 GNAI1P63096 354 aa13.46□□□□□ -0.25
HOXA4-203ENST00000511914 ITPK1Q13572 414 aa13.46□□□□□ -0.25
HOXA4-203ENST00000511914 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
HOXA4-203ENST00000511914 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.25
HOXA4-203ENST00000511914 ZNF428Q96B54 188 aa13.46□□□□□ -0.25
HOXA4-203ENST00000511914 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
HOXA4-203ENST00000511914 COL5A3P25940 1745 aaPredicted RBP13.45□□□□□ -0.26
HOXA4-203ENST00000511914 ZNF853P0CG23 659 aa13.45□□□□□ -0.26
HOXA4-203ENST00000511914 IFFO2Q5TF58 517 aa13.45□□□□□ -0.26
HOXA4-203ENST00000511914 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
HOXA4-203ENST00000511914 AMOTQ4VCS5 1084 aa13.44□□□□□ -0.26
HOXA4-203ENST00000511914 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
HOXA4-203ENST00000511914 C4AP0C0L4 1744 aa13.43□□□□□ -0.26
HOXA4-203ENST00000511914 PHKG2P15735 406 aa13.43□□□□□ -0.26
HOXA4-203ENST00000511914 HSPA6P17066 643 aa13.43□□□□□ -0.26
HOXA4-203ENST00000511914 IFNL2Q8IZJ0 200 aa13.43□□□□□ -0.26
HOXA4-203ENST00000511914 ATG3Q9NT62 314 aa13.43□□□□□ -0.26
HOXA4-203ENST00000511914 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
HOXA4-203ENST00000511914 BRCA1P38398 1863 aaKnown RBP13.42□□□□□ -0.26
HOXA4-203ENST00000511914 MMP10P09238 476 aa13.42□□□□□ -0.26
HOXA4-203ENST00000511914 MTHFSDQ2M296 383 aaKnown RBP13.42□□□□□ -0.26
HOXA4-203ENST00000511914 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
HOXA4-203ENST00000511914 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
HOXA4-203ENST00000511914 PXDNLA1KZ92 1463 aa13.42□□□□□ -0.26
HOXA4-203ENST00000511914 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
HOXA4-203ENST00000511914 PLEKHO1Q53GL0 409 aaPredicted RBP13.41□□□□□ -0.26
HOXA4-203ENST00000511914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.26
HOXA4-203ENST00000511914 MYH14Q7Z406 1995 aaKnown RBP13.4□□□□□ -0.26
HOXA4-203ENST00000511914 CHL1O00533 1208 aa13.4□□□□□ -0.26
HOXA4-203ENST00000511914 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
HOXA4-203ENST00000511914 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
HOXA4-203ENST00000511914 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
HOXA4-203ENST00000511914 BCS1LQ9Y276 419 aa13.4□□□□□ -0.26
HOXA4-203ENST00000511914 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
HOXA4-203ENST00000511914 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
HOXA4-203ENST00000511914 KIF3CO14782 793 aa13.39□□□□□ -0.27
HOXA4-203ENST00000511914 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
HOXA4-203ENST00000511914 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
HOXA4-203ENST00000511914 SLC4A9Q96Q91 983 aa13.39□□□□□ -0.27
HOXA4-203ENST00000511914 RTCBQ9Y3I0 505 aaKnown RBP13.39□□□□□ -0.27
HOXA4-203ENST00000511914 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
HOXA4-203ENST00000511914 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
HOXA4-203ENST00000511914 ARFGEF1Q9Y6D6 1849 aa13.37□□□□□ -0.27
HOXA4-203ENST00000511914 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
HOXA4-203ENST00000511914 EXOSC9Q06265 439 aaKnown RBP13.37□□□□□ -0.27
HOXA4-203ENST00000511914 PDE3AQ14432 1141 aa13.37□□□□□ -0.27
HOXA4-203ENST00000511914 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
HOXA4-203ENST00000511914 AKAP4Q5JQC9 854 aa13.37□□□□□ -0.27
HOXA4-203ENST00000511914 ARHGEF1Q92888 912 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms