RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 COL15A1P39059 1388 aa20.5■□□□□ 0.87
COL1A1-213ENST00000511732 DPEP1P16444 411 aa20.5■□□□□ 0.87
COL1A1-213ENST00000511732 TM4SF1P30408 202 aa20.5■□□□□ 0.87
COL1A1-213ENST00000511732 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
COL1A1-213ENST00000511732 KCNA3P22001 575 aa20.49■□□□□ 0.87
COL1A1-213ENST00000511732 ADCY9O60503 1353 aa20.48■□□□□ 0.87
COL1A1-213ENST00000511732 ATP10DQ9P241 1426 aa20.48■□□□□ 0.87
COL1A1-213ENST00000511732 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
COL1A1-213ENST00000511732 KCNQ3O43525 872 aa20.48■□□□□ 0.87
COL1A1-213ENST00000511732 ZPR1O75312 459 aa20.48■□□□□ 0.87
COL1A1-213ENST00000511732 FCHSD2O94868 740 aa20.48■□□□□ 0.87
COL1A1-213ENST00000511732 CANXP27824 592 aaKnown RBP20.48■□□□□ 0.87
COL1A1-213ENST00000511732 BCL2L12Q9HB09 334 aa20.48■□□□□ 0.87
COL1A1-213ENST00000511732 NARFQ9UHQ1 456 aa20.48■□□□□ 0.87
COL1A1-213ENST00000511732 BCS1LQ9Y276 419 aa20.47■□□□□ 0.87
COL1A1-213ENST00000511732 AFDNP55196 1824 aaKnown RBP20.47■□□□□ 0.87
COL1A1-213ENST00000511732 C1QTNF8P60827 252 aa20.46■□□□□ 0.87
COL1A1-213ENST00000511732 BTBD11A6QL63 1104 aa20.45■□□□□ 0.86
COL1A1-213ENST00000511732 STARD3NLO95772 234 aa20.45■□□□□ 0.86
COL1A1-213ENST00000511732 EIF5P55010 431 aaKnown RBP20.45■□□□□ 0.86
COL1A1-213ENST00000511732 NFIXQ14938 502 aa20.45■□□□□ 0.86
COL1A1-213ENST00000511732 MCM10Q7L590 875 aa20.45■□□□□ 0.86
COL1A1-213ENST00000511732 NRXN2Q9P2S2 1712 aa20.44■□□□□ 0.86
COL1A1-213ENST00000511732 DCTN1Q14203 1278 aa20.44■□□□□ 0.86
COL1A1-213ENST00000511732 GIGYF1O75420 1035 aaPredicted RBP20.43■□□□□ 0.86
COL1A1-213ENST00000511732 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
COL1A1-213ENST00000511732 ARFGEF1Q9Y6D6 1849 aa20.43■□□□□ 0.86
COL1A1-213ENST00000511732 CHRNA5P30532 468 aa20.42■□□□□ 0.86
COL1A1-213ENST00000511732 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
COL1A1-213ENST00000511732 DLG5Q8TDM6 1919 aa20.41■□□□□ 0.86
COL1A1-213ENST00000511732 A1BGP04217 495 aa20.41■□□□□ 0.86
COL1A1-213ENST00000511732 PRAMEF22A3QJZ6 481 aa20.4■□□□□ 0.86
COL1A1-213ENST00000511732 SCN7AQ01118 1682 aa20.4■□□□□ 0.86
COL1A1-213ENST00000511732 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
COL1A1-213ENST00000511732 USP16Q9Y5T5 823 aa20.4■□□□□ 0.86
COL1A1-213ENST00000511732 SERPINB2P05120 415 aa20.39■□□□□ 0.85
COL1A1-213ENST00000511732 ZNF526Q8TF50 670 aaPredicted RBP20.39■□□□□ 0.85
COL1A1-213ENST00000511732 PLEKHF1Q96S99 279 aa20.39■□□□□ 0.85
COL1A1-213ENST00000511732 PIM2Q9P1W9 311 aa20.39■□□□□ 0.85
COL1A1-213ENST00000511732 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
COL1A1-213ENST00000511732 IL6STP40189 918 aaPredicted RBP20.38■□□□□ 0.85
COL1A1-213ENST00000511732 ARHGAP27Q6ZUM4 889 aa20.38■□□□□ 0.85
COL1A1-213ENST00000511732 TBC1D2BQ9UPU7 963 aa20.38■□□□□ 0.85
COL1A1-213ENST00000511732 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
COL1A1-213ENST00000511732 A0A087WZG4 1122 aa20.37■□□□□ 0.85
COL1A1-213ENST00000511732 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
COL1A1-213ENST00000511732 TBC1D9BQ66K14 1250 aa20.37■□□□□ 0.85
COL1A1-213ENST00000511732 BICDL1Q6ZP65 573 aa20.37■□□□□ 0.85
COL1A1-213ENST00000511732 GPBP1L1Q9HC44 474 aaPredicted RBP20.37■□□□□ 0.85
COL1A1-213ENST00000511732 CARMIL3Q8ND23 1372 aa20.36■□□□□ 0.85
COL1A1-213ENST00000511732 DALRD3Q5D0E6 543 aaKnown RBP20.36■□□□□ 0.85
COL1A1-213ENST00000511732 DLEC1Q9Y238 1755 aa20.36■□□□□ 0.85
COL1A1-213ENST00000511732 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
COL1A1-213ENST00000511732 BCORQ6W2J9 1755 aa20.35■□□□□ 0.85
COL1A1-213ENST00000511732 SENP3-EIF4A1A0A087X0R7 540 aa20.34■□□□□ 0.85
COL1A1-213ENST00000511732 CAMTA2O94983 1202 aa20.34■□□□□ 0.85
COL1A1-213ENST00000511732 TAF7Q15545 349 aaPredicted RBP20.34■□□□□ 0.85
COL1A1-213ENST00000511732 ANKRD31Q8N7Z5 1873 aa20.34■□□□□ 0.85
COL1A1-213ENST00000511732 SNRPA1P09661 255 aaKnown RBP20.33■□□□□ 0.85
COL1A1-213ENST00000511732 DDX10Q13206 875 aaKnown RBP20.33■□□□□ 0.85
COL1A1-213ENST00000511732 KDM3BQ7LBC6 1761 aa20.33■□□□□ 0.84
COL1A1-213ENST00000511732 NBPF26B4DH59 902 aa20.31■□□□□ 0.84
COL1A1-213ENST00000511732 RALBP1Q15311 655 aa20.31■□□□□ 0.84
COL1A1-213ENST00000511732 NFE2L2Q16236 605 aa20.31■□□□□ 0.84
COL1A1-213ENST00000511732 NBPF10Q6P3W6 841 aaKnown RBP20.31■□□□□ 0.84
COL1A1-213ENST00000511732 CCDC24Q8N4L8 307 aa20.31■□□□□ 0.84
COL1A1-213ENST00000511732 NBPF15Q8N660 670 aa20.31■□□□□ 0.84
COL1A1-213ENST00000511732 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
COL1A1-213ENST00000511732 SBF1O95248 1867 aa20.3■□□□□ 0.84
COL1A1-213ENST00000511732 NEFMP07197 916 aa20.3■□□□□ 0.84
COL1A1-213ENST00000511732 DZIP3Q86Y13 1208 aaKnown RBP20.3■□□□□ 0.84
COL1A1-213ENST00000511732 LAMB4A4D0S4 1761 aa20.29■□□□□ 0.84
COL1A1-213ENST00000511732 KIF3CO14782 793 aa20.29■□□□□ 0.84
COL1A1-213ENST00000511732 C9orf131Q5VYM1 1079 aa20.29■□□□□ 0.84
COL1A1-213ENST00000511732 PRR5LQ6MZQ0 368 aa20.29■□□□□ 0.84
COL1A1-213ENST00000511732 C2CD5Q86YS7 1000 aa20.29■□□□□ 0.84
COL1A1-213ENST00000511732 COL11A2P13942 1736 aaPredicted RBP20.28■□□□□ 0.84
COL1A1-213ENST00000511732 NPM2Q86SE8 214 aaKnown RBP20.28■□□□□ 0.84
COL1A1-213ENST00000511732 H0YIN7 160 aa20.26■□□□□ 0.83
COL1A1-213ENST00000511732 TTLL6Q8N841 843 aa20.26■□□□□ 0.83
COL1A1-213ENST00000511732 SETDB2Q96T68 719 aa20.26■□□□□ 0.83
COL1A1-213ENST00000511732 PNNQ9H307 717 aaKnown RBP20.26■□□□□ 0.83
COL1A1-213ENST00000511732 MAPK8IP3Q9UPT6 1336 aa20.26■□□□□ 0.83
COL1A1-213ENST00000511732 PRELPP51888 382 aa20.25■□□□□ 0.83
COL1A1-213ENST00000511732 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
COL1A1-213ENST00000511732 RASSF7Q02833 373 aa20.25■□□□□ 0.83
COL1A1-213ENST00000511732 BRIP1Q9BX63 1249 aa20.25■□□□□ 0.83
COL1A1-213ENST00000511732 PNISRQ8TF01 805 aaKnown RBP20.24■□□□□ 0.83
COL1A1-213ENST00000511732 RNF181Q9P0P0 153 aa20.24■□□□□ 0.83
COL1A1-213ENST00000511732 PDE6BP35913 854 aa20.23■□□□□ 0.83
COL1A1-213ENST00000511732 CLEC4GQ6UXB4 293 aa20.23■□□□□ 0.83
COL1A1-213ENST00000511732 CNBD1Q8NA66 436 aa20.23■□□□□ 0.83
COL1A1-213ENST00000511732 NMRK2Q9NPI5 230 aa20.23■□□□□ 0.83
COL1A1-213ENST00000511732 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
COL1A1-213ENST00000511732 CCDC88AQ3V6T2 1871 aa20.22■□□□□ 0.83
COL1A1-213ENST00000511732 ZNF622Q969S3 477 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL1A1-213ENST00000511732 RIPK4P57078 832 aa20.21■□□□□ 0.83
COL1A1-213ENST00000511732 HLFQ16534 295 aa20.21■□□□□ 0.83
COL1A1-213ENST00000511732 CACNA1SQ13698 1873 aa20.21■□□□□ 0.83
COL1A1-213ENST00000511732 PDZRN3Q9UPQ7 1066 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms