RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MTFR1Q15390 333 aa6.37□□□□□ -1.39
CHD1-207ENST00000511628 TBCELQ5QJ74 424 aa6.37□□□□□ -1.39
CHD1-207ENST00000511628 FIGNL1Q6PIW4 674 aa6.37□□□□□ -1.39
CHD1-207ENST00000511628 SLC9A9Q8IVB4 645 aa6.37□□□□□ -1.39
CHD1-207ENST00000511628 ZMYND15Q9H091 742 aa6.37□□□□□ -1.39
CHD1-207ENST00000511628 SERTM1A2A2V5 107 aa6.36□□□□□ -1.39
CHD1-207ENST00000511628 SFI1A8K8P3 1242 aa6.36□□□□□ -1.39
CHD1-207ENST00000511628 RFX1P22670 979 aa6.36□□□□□ -1.39
CHD1-207ENST00000511628 SEC13P55735 322 aa6.36□□□□□ -1.39
CHD1-207ENST00000511628 KIAA1024Q9UPX6 916 aa6.36□□□□□ -1.39
CHD1-207ENST00000511628 IGF1RP08069 1367 aa6.35□□□□□ -1.39
CHD1-207ENST00000511628 A0A1W2PNR3 127 aa6.35□□□□□ -1.39
CHD1-207ENST00000511628 ZBTB7BO15156 539 aaPredicted RBP6.35□□□□□ -1.39
CHD1-207ENST00000511628 PPP1R12BO60237 982 aaPredicted RBP6.35□□□□□ -1.39
CHD1-207ENST00000511628 GAS6Q14393 721 aa6.35□□□□□ -1.39
CHD1-207ENST00000511628 CHMP7Q8WUX9 453 aaPredicted RBP6.35□□□□□ -1.39
CHD1-207ENST00000511628 L3MBTL2Q969R5 705 aa6.35□□□□□ -1.39
CHD1-207ENST00000511628 CCDC97Q96F63 343 aaPredicted RBP6.35□□□□□ -1.39
CHD1-207ENST00000511628 CFHR5Q9BXR6 569 aa6.35□□□□□ -1.39
CHD1-207ENST00000511628 ENAMQ9NRM1 1142 aa6.35□□□□□ -1.39
CHD1-207ENST00000511628 SUPT5HO00267 1087 aaKnown RBP6.34□□□□□ -1.39
CHD1-207ENST00000511628 ATXN7O15265 892 aaPredicted RBP6.34□□□□□ -1.39
CHD1-207ENST00000511628 BMP4P12644 408 aa6.34□□□□□ -1.39
CHD1-207ENST00000511628 NOS2P35228 1153 aa6.34□□□□□ -1.39
CHD1-207ENST00000511628 MARSP56192 900 aaKnown RBP6.34□□□□□ -1.39
CHD1-207ENST00000511628 PSMA6P60900 246 aaKnown RBP6.34□□□□□ -1.39
CHD1-207ENST00000511628 CDCA8Q53HL2 280 aa6.34□□□□□ -1.39
CHD1-207ENST00000511628 NLRP8Q86W28 1048 aa6.34□□□□□ -1.39
CHD1-207ENST00000511628 SIX5Q8N196 739 aa6.34□□□□□ -1.39
CHD1-207ENST00000511628 TSEN2Q8NCE0 465 aaKnown RBP6.34□□□□□ -1.39
CHD1-207ENST00000511628 ABHD17AQ96GS6 310 aa6.34□□□□□ -1.39
CHD1-207ENST00000511628 CRISPLD1Q9H336 500 aa6.34□□□□□ -1.39
CHD1-207ENST00000511628 ZDHHC3Q9NYG2 299 aa6.34□□□□□ -1.39
CHD1-207ENST00000511628 ATXN7L1Q9ULK2 861 aaPredicted RBP6.34□□□□□ -1.39
CHD1-207ENST00000511628 IQSEC3Q9UPP2 1182 aaPredicted RBP6.34□□□□□ -1.39
CHD1-207ENST00000511628 USP3Q9Y6I4 520 aa6.34□□□□□ -1.39
CHD1-207ENST00000511628 M0R2N6 131 aa6.33□□□□□ -1.4
CHD1-207ENST00000511628 SLURP2P0DP57 97 aa6.33□□□□□ -1.4
CHD1-207ENST00000511628 MAP2K3P46734 347 aa6.33□□□□□ -1.4
CHD1-207ENST00000511628 DPYDQ12882 1025 aa6.33□□□□□ -1.4
CHD1-207ENST00000511628 TEAD4Q15561 434 aa6.33□□□□□ -1.4
CHD1-207ENST00000511628 NEDD1Q8NHV4 660 aa6.33□□□□□ -1.4
CHD1-207ENST00000511628 RHPN1Q8TCX5 695 aa6.33□□□□□ -1.4
CHD1-207ENST00000511628 TSPAN10Q9H1Z9 355 aaPredicted RBP6.33□□□□□ -1.4
CHD1-207ENST00000511628 PCDHGC4Q9Y5F7 938 aa6.33□□□□□ -1.4
CHD1-207ENST00000511628 DCDC2BA2VCK2 349 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L15C9J2P7 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L10C9JJH3 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L13C9JLJ4 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L12C9JPN9 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L11C9JVI0 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L21D6R901 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L18D6R9N7 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L22D6RA61 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L17D6RBQ6 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L19D6RCP7 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L20D6RJB6 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 KHNYNO15037 678 aaKnown RBP6.32□□□□□ -1.4
CHD1-207ENST00000511628 ATP4AP20648 1035 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 FGFR3P22607 806 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 USP17L24Q0WX57 530 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 ANKMY2Q8IV38 441 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 SCG3Q8WXD2 468 aaKnown RBP6.32□□□□□ -1.4
CHD1-207ENST00000511628 VTI1AQ96AJ9 217 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 ZCCHC2Q9C0B9 1178 aaKnown RBP6.32□□□□□ -1.4
CHD1-207ENST00000511628 HCN4Q9Y3Q4 1203 aa6.32□□□□□ -1.4
CHD1-207ENST00000511628 FAM196BA6NMK8 535 aa6.31□□□□□ -1.4
CHD1-207ENST00000511628 TXLNAP40222 546 aa6.31□□□□□ -1.4
CHD1-207ENST00000511628 FOXK2Q01167 660 aa6.31□□□□□ -1.4
CHD1-207ENST00000511628 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
CHD1-207ENST00000511628 ZNF385CQ66K41 422 aaPredicted RBP6.31□□□□□ -1.4
CHD1-207ENST00000511628 FAM200AQ8TCP9 573 aa6.31□□□□□ -1.4
CHD1-207ENST00000511628 WHAMMQ8TF30 809 aa6.31□□□□□ -1.4
CHD1-207ENST00000511628 NGLY1Q96IV0 654 aa6.31□□□□□ -1.4
CHD1-207ENST00000511628 ZIC5Q96T25 663 aa6.31□□□□□ -1.4
CHD1-207ENST00000511628 ATAD2Q6PL18 1390 aa6.31□□□□□ -1.4
CHD1-207ENST00000511628 RNF225M0QZC1 329 aaPredicted RBP6.3□□□□□ -1.4
CHD1-207ENST00000511628 BNIP3LO60238 219 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 LGR5O75473 907 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 CELA2BP08218 269 aaPredicted RBP6.3□□□□□ -1.4
CHD1-207ENST00000511628 BCRP11274 1271 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
CHD1-207ENST00000511628 EPHA4P54764 986 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 PTK7Q13308 1070 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 KANK4Q5T7N3 995 aaPredicted RBP6.3□□□□□ -1.4
CHD1-207ENST00000511628 LYPD4Q6UWN0 246 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 LRRC69Q6ZNQ3 347 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 PODNQ7Z5L7 613 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 ZDHHC1Q8WTX9 485 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 OXCT2Q9BYC2 517 aaPredicted RBP6.3□□□□□ -1.4
CHD1-207ENST00000511628 ANKIB1Q9P2G1 1089 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 PRR12Q9ULL5 1215 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 ADAMTS8Q9UP79 889 aa6.3□□□□□ -1.4
CHD1-207ENST00000511628 AMPD1P23109 780 aa6.29□□□□□ -1.4
CHD1-207ENST00000511628 CFAP70Q5T0N1 1121 aa6.29□□□□□ -1.4
CHD1-207ENST00000511628 GAS2L2Q8NHY3 880 aa6.29□□□□□ -1.4
CHD1-207ENST00000511628 PHACTR1Q9C0D0 580 aa6.29□□□□□ -1.4
CHD1-207ENST00000511628 EML1O00423 815 aa6.28□□□□□ -1.4
CHD1-207ENST00000511628 THBS1P07996 1170 aa6.28□□□□□ -1.4
CHD1-207ENST00000511628 MAPTP10636 758 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms