RNA–Protein interactions for RNA: ENST00000511317.1

DDX60-204, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-204ENST00000511317 C1orf216Q8TAB5 229 aa11.18□□□□□ -0.62
DDX60-204ENST00000511317 ZCCHC2Q9C0B9 1178 aaKnown RBP11.18□□□□□ -0.62
DDX60-204ENST00000511317 NSFL1CQ9UNZ2 370 aaKnown RBP11.18□□□□□ -0.62
DDX60-204ENST00000511317 USP17L3A6NCW0 530 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 USP17L4A6NCW7 530 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 FGFR3P22607 806 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 CLDN10P78369 228 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 TMEM132AQ24JP5 1023 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 USP17L2Q6R6M4 530 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 USP17L1Q7RTZ2 530 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 PLEKHM2Q8IWE5 1019 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 AIDAQ96BJ3 306 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 ENAMQ9NRM1 1142 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 PARP3Q9Y6F1 533 aa11.17□□□□□ -0.62
DDX60-204ENST00000511317 ZDHHC3Q9NYG2 299 aa11.16□□□□□ -0.62
DDX60-204ENST00000511317 A0A1W2PNR3 127 aa11.15□□□□□ -0.62
DDX60-204ENST00000511317 KANK3Q6NY19 840 aa11.15□□□□□ -0.62
DDX60-204ENST00000511317 NLRP8Q86W28 1048 aa11.15□□□□□ -0.62
DDX60-204ENST00000511317 ZIC5Q96T25 663 aa11.15□□□□□ -0.62
DDX60-204ENST00000511317 CABP1Q9NZU7 370 aa11.15□□□□□ -0.62
DDX60-204ENST00000511317 PCDHGC4Q9Y5F7 938 aa11.15□□□□□ -0.62
DDX60-204ENST00000511317 DNMT3AQ9Y6K1 912 aaPredicted RBP11.15□□□□□ -0.62
DDX60-204ENST00000511317 HOXB4P17483 251 aaPredicted RBP11.14□□□□□ -0.63
DDX60-204ENST00000511317 TXLNAP40222 546 aa11.14□□□□□ -0.63
DDX60-204ENST00000511317 PSME1Q06323 249 aa11.14□□□□□ -0.63
DDX60-204ENST00000511317 TNS4Q8IZW8 715 aa11.14□□□□□ -0.63
DDX60-204ENST00000511317 NEDD1Q8NHV4 660 aa11.14□□□□□ -0.63
DDX60-204ENST00000511317 BACH1O14867 736 aa11.13□□□□□ -0.63
DDX60-204ENST00000511317 ATP9BO43861 1147 aa11.13□□□□□ -0.63
DDX60-204ENST00000511317 BMP4P12644 408 aa11.13□□□□□ -0.63
DDX60-204ENST00000511317 SNRPNP63162 240 aaKnown RBP11.13□□□□□ -0.63
DDX60-204ENST00000511317 NBPF1Q3BBV0 1214 aa11.13□□□□□ -0.63
DDX60-204ENST00000511317 DKK1O94907 266 aa11.12□□□□□ -0.63
DDX60-204ENST00000511317 TNP2Q05952 138 aa11.12□□□□□ -0.63
DDX60-204ENST00000511317 TBCELQ5QJ74 424 aa11.12□□□□□ -0.63
DDX60-204ENST00000511317 SH3PXD2AQ5TCZ1 1133 aa11.12□□□□□ -0.63
DDX60-204ENST00000511317 FIGNL1Q6PIW4 674 aa11.12□□□□□ -0.63
DDX60-204ENST00000511317 GALNT6Q8NCL4 622 aa11.12□□□□□ -0.63
DDX60-204ENST00000511317 TPCN2Q8NHX9 752 aa11.12□□□□□ -0.63
DDX60-204ENST00000511317 C7orf43Q8WVR3 580 aa11.12□□□□□ -0.63
DDX60-204ENST00000511317 DCDC2BA2VCK2 349 aa11.11□□□□□ -0.63
DDX60-204ENST00000511317 ATXN7O15265 892 aaPredicted RBP11.11□□□□□ -0.63
DDX60-204ENST00000511317 ITGB2P05107 769 aa11.11□□□□□ -0.63
DDX60-204ENST00000511317 MAPTP10636 758 aaKnown RBP11.11□□□□□ -0.63
DDX60-204ENST00000511317 TEAD4Q15561 434 aa11.11□□□□□ -0.63
DDX60-204ENST00000511317 ARSJQ5FYB0 599 aaPredicted RBP11.11□□□□□ -0.63
DDX60-204ENST00000511317 SLC9A9Q8IVB4 645 aa11.11□□□□□ -0.63
DDX60-204ENST00000511317 GGA1Q9UJY5 639 aa11.11□□□□□ -0.63
DDX60-204ENST00000511317 GDF2Q9UK05 429 aaPredicted RBP11.11□□□□□ -0.63
DDX60-204ENST00000511317 SLCO4C1Q6ZQN7 724 aa11.1□□□□□ -0.63
DDX60-204ENST00000511317 PROSER2Q86WR7 435 aaPredicted RBP11.1□□□□□ -0.63
DDX60-204ENST00000511317 L3MBTL2Q969R5 705 aa11.1□□□□□ -0.63
DDX60-204ENST00000511317 KLF15Q9UIH9 416 aa11.1□□□□□ -0.63
DDX60-204ENST00000511317 TATP17735 454 aaPredicted RBP11.09□□□□□ -0.63
DDX60-204ENST00000511317 CCDC102BQ68D86 513 aa11.09□□□□□ -0.63
DDX60-204ENST00000511317 TRIM50Q86XT4 487 aa11.09□□□□□ -0.63
DDX60-204ENST00000511317 GOLGA6L1Q8N7Z2 621 aa11.09□□□□□ -0.63
DDX60-204ENST00000511317 EDARADDQ8WWZ3 215 aa11.09□□□□□ -0.63
DDX60-204ENST00000511317 GLMNQ92990 594 aa11.09□□□□□ -0.63
DDX60-204ENST00000511317 EML1O00423 815 aa11.08□□□□□ -0.64
DDX60-204ENST00000511317 CD33P20138 364 aa11.08□□□□□ -0.64
DDX60-204ENST00000511317 NOS2P35228 1153 aa11.08□□□□□ -0.64
DDX60-204ENST00000511317 OGFOD1Q8N543 542 aa11.08□□□□□ -0.64
DDX60-204ENST00000511317 BEND7Q8N7W2 519 aaPredicted RBP11.08□□□□□ -0.64
DDX60-204ENST00000511317 DCAF5Q96JK2 942 aa11.08□□□□□ -0.64
DDX60-204ENST00000511317 STRN4Q9NRL3 753 aa11.08□□□□□ -0.64
DDX60-204ENST00000511317 MKRN1Q9UHC7 482 aaKnown RBP11.08□□□□□ -0.64
DDX60-204ENST00000511317 PHF20L1A8MW92 1017 aa11.07□□□□□ -0.64
DDX60-204ENST00000511317 EFSO43281 561 aa11.07□□□□□ -0.64
DDX60-204ENST00000511317 FAM157BP0CG42 384 aa11.07□□□□□ -0.64
DDX60-204ENST00000511317 SAMD5Q5TGI4 173 aa11.07□□□□□ -0.64
DDX60-204ENST00000511317 POTEAQ6S8J7 498 aa11.07□□□□□ -0.64
DDX60-204ENST00000511317 TSPAN10Q9H1Z9 355 aaPredicted RBP11.07□□□□□ -0.64
DDX60-204ENST00000511317 ARAFP10398 606 aa11.06□□□□□ -0.64
DDX60-204ENST00000511317 FAM182BQ5T319 152 aa11.06□□□□□ -0.64
DDX60-204ENST00000511317 GPAT2Q6NUI2 795 aa11.06□□□□□ -0.64
DDX60-204ENST00000511317 SIX5Q8N196 739 aa11.06□□□□□ -0.64
DDX60-204ENST00000511317 KHNYNO15037 678 aaKnown RBP11.05□□□□□ -0.64
DDX60-204ENST00000511317 EPXP11678 715 aa11.05□□□□□ -0.64
DDX60-204ENST00000511317 ATP1A2P50993 1020 aa11.05□□□□□ -0.64
DDX60-204ENST00000511317 LARGE2Q8N3Y3 721 aa11.05□□□□□ -0.64
DDX60-204ENST00000511317 MAFBQ9Y5Q3 323 aaPredicted RBP11.05□□□□□ -0.64
DDX60-204ENST00000511317 NEURL1BA8MQ27 555 aa11.04□□□□□ -0.64
DDX60-204ENST00000511317 LINC00114Q6XXX2 140 aa11.04□□□□□ -0.64
DDX60-204ENST00000511317 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
DDX60-204ENST00000511317 TSEN2Q8NCE0 465 aaKnown RBP11.04□□□□□ -0.64
DDX60-204ENST00000511317 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
DDX60-204ENST00000511317 TFIP11Q9UBB9 837 aaKnown RBP11.04□□□□□ -0.64
DDX60-204ENST00000511317 SFI1A8K8P3 1242 aa11.03□□□□□ -0.64
DDX60-204ENST00000511317 C21orf2O43822 256 aa11.03□□□□□ -0.64
DDX60-204ENST00000511317 COL8A1P27658 744 aa11.03□□□□□ -0.64
DDX60-204ENST00000511317 GRIN2CQ14957 1233 aa11.03□□□□□ -0.64
DDX60-204ENST00000511317 PLA2G4EQ3MJ16 856 aa11.03□□□□□ -0.64
DDX60-204ENST00000511317 BICDL1Q6ZP65 573 aa11.03□□□□□ -0.64
DDX60-204ENST00000511317 FCHSD1Q86WN1 690 aa11.03□□□□□ -0.64
DDX60-204ENST00000511317 SERTM1A2A2V5 107 aa11.02□□□□□ -0.65
DDX60-204ENST00000511317 PALM3A6NDB9 673 aaPredicted RBP11.02□□□□□ -0.65
DDX60-204ENST00000511317 M0R2N6 131 aa11.02□□□□□ -0.65
DDX60-204ENST00000511317 A6NJR5 290 aa11.01□□□□□ -0.65
DDX60-204ENST00000511317 HIRAP54198 1017 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms