RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 ANKRD18AQ8IVF6 992 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 NIM1KQ8IY84 436 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 AIDAQ96BJ3 306 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 MTFR1LQ9H019 292 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 UBR1Q8IWV7 1749 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 LOC102724428A0A0B4J2F2 783 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 PHKG2P15735 406 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 SIK1P57059 783 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 CCDC136Q96JN2 1154 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 NIP7Q9Y221 180 aaKnown RBP eCLIP11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 KIF3AQ9Y496 699 aa11.87□□□□□ -0.51
POLR2J3-215ENST00000511313 PTPRCP08575 1304 aa11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 ALDH1L1O75891 902 aa11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 ZNF804AQ7Z570 1209 aa11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 ZC3H12CQ9C0D7 883 aaKnown RBP11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 TRAF1Q13077 416 aa11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 ALDH1L2Q3SY69 923 aa11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 DALRD3Q5D0E6 543 aaKnown RBP11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 TESK2Q96S53 571 aa11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 IQCA1LA6NCM1 817 aa11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 DDX17Q92841 729 aaKnown RBP11.86□□□□□ -0.51
POLR2J3-215ENST00000511313 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 RPS6KA4O75676 772 aa11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 ADGRB2O60241 1585 aa11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 ITSN1Q15811 1721 aa11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 HSP90AA1P07900 732 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 MPHOSPH6Q99547 160 aaKnown RBP11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 PLSCR1O15162 318 aa11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 OTUD7BQ6GQQ9 843 aa11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 TCEAL9Q9UHQ7 104 aa11.85□□□□□ -0.51
POLR2J3-215ENST00000511313 H7C1D1 291 aa11.84□□□□□ -0.51
POLR2J3-215ENST00000511313 PIM2Q9P1W9 311 aa11.84□□□□□ -0.51
POLR2J3-215ENST00000511313 TTLL12Q14166 644 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-215ENST00000511313 DUSP27Q5VZP5 1158 aa11.84□□□□□ -0.51
POLR2J3-215ENST00000511313 SYNE3Q6ZMZ3 975 aa11.84□□□□□ -0.51
POLR2J3-215ENST00000511313 MYL6BP14649 208 aa11.83□□□□□ -0.51
POLR2J3-215ENST00000511313 PLCG2P16885 1265 aa11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 NACAP1Q9BZK3 213 aa11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 FAM177BA6PVY3 158 aa11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 CCDC93Q567U6 631 aa11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 CPLX2Q6PUV4 134 aaKnown RBP11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 PRR36Q9H6K5 1346 aa11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 GNAI2P04899 355 aa11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 RBM5P52756 815 aaKnown RBP eCLIP11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 CCDC27Q2M243 656 aa11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 ANKRD13DQ6ZTN6 518 aa11.83□□□□□ -0.52
POLR2J3-215ENST00000511313 PALLDQ8WX93 1383 aa11.82□□□□□ -0.52
POLR2J3-215ENST00000511313 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
POLR2J3-215ENST00000511313 SH3TC1Q8TE82 1336 aa11.82□□□□□ -0.52
POLR2J3-215ENST00000511313 KCNQ2O43526 872 aa11.82□□□□□ -0.52
POLR2J3-215ENST00000511313 UQCRFS1P1P0C7P4 283 aa11.82□□□□□ -0.52
POLR2J3-215ENST00000511313 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
POLR2J3-215ENST00000511313 TNFAIP1Q13829 316 aa11.82□□□□□ -0.52
POLR2J3-215ENST00000511313 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
POLR2J3-215ENST00000511313 ARHGAP27Q6ZUM4 889 aa11.82□□□□□ -0.52
POLR2J3-215ENST00000511313 C2CD5Q86YS7 1000 aa11.81□□□□□ -0.52
POLR2J3-215ENST00000511313 CCDC34Q96HJ3 373 aa11.81□□□□□ -0.52
POLR2J3-215ENST00000511313 IGSF3O75054 1194 aa11.81□□□□□ -0.52
POLR2J3-215ENST00000511313 BCS1LQ9Y276 419 aa11.81□□□□□ -0.52
POLR2J3-215ENST00000511313 ERVV-1B6SEH8 477 aa11.81□□□□□ -0.52
POLR2J3-215ENST00000511313 BAG3O95817 575 aa11.81□□□□□ -0.52
POLR2J3-215ENST00000511313 DZIP1LQ8IYY4 767 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-215ENST00000511313 NWD1Q149M9 1564 aa11.81□□□□□ -0.52
POLR2J3-215ENST00000511313 B4DLN1 442 aa11.8□□□□□ -0.52
POLR2J3-215ENST00000511313 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
POLR2J3-215ENST00000511313 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-215ENST00000511313 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
POLR2J3-215ENST00000511313 TRDNQ13061 729 aa11.8□□□□□ -0.52
POLR2J3-215ENST00000511313 NFATC2IPQ8NCF5 419 aa11.8□□□□□ -0.52
POLR2J3-215ENST00000511313 DNAAF4Q8WXU2 420 aa11.8□□□□□ -0.52
POLR2J3-215ENST00000511313 IGSF1Q8N6C5 1336 aa11.8□□□□□ -0.52
POLR2J3-215ENST00000511313 BBOX1O75936 387 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 MVPQ14764 893 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 NPR1P16066 1061 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 SLC15A2Q16348 729 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 LARGE2Q8N3Y3 721 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 TTLL6Q8N841 843 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 ERICH2A1L162 156 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 PLBD2Q8NHP8 589 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 TBC1D22AQ8WUA7 517 aa11.79□□□□□ -0.52
POLR2J3-215ENST00000511313 ELL2O00472 640 aaPredicted RBP11.78□□□□□ -0.52
POLR2J3-215ENST00000511313 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
POLR2J3-215ENST00000511313 EN1Q05925 392 aaPredicted RBP11.78□□□□□ -0.52
POLR2J3-215ENST00000511313 TTF1Q15361 905 aaPredicted RBP11.78□□□□□ -0.52
POLR2J3-215ENST00000511313 CD2APQ9Y5K6 639 aa11.78□□□□□ -0.52
POLR2J3-215ENST00000511313 CD163L1Q9NR16 1453 aa11.78□□□□□ -0.52
POLR2J3-215ENST00000511313 TGFB2P61812 414 aa11.78□□□□□ -0.52
POLR2J3-215ENST00000511313 METTL24Q5JXM2 366 aa11.78□□□□□ -0.52
POLR2J3-215ENST00000511313 IL13P35225 146 aa11.77□□□□□ -0.52
POLR2J3-215ENST00000511313 AMER1Q5JTC6 1135 aaPredicted RBP11.77□□□□□ -0.52
POLR2J3-215ENST00000511313 ATP2B4P23634 1241 aa11.77□□□□□ -0.53
POLR2J3-215ENST00000511313 CCDC178Q5BJE1 867 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 280 ms