RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 SMCPP49901 116 aaPredicted RBP12.36□□□□□ -0.43
LINC01088-207ENST00000511241 CLN3Q13286 438 aa12.36□□□□□ -0.43
LINC01088-207ENST00000511241 AGBL1Q96MI9 1066 aa12.36□□□□□ -0.43
LINC01088-207ENST00000511241 ESYT1Q9BSJ8 1104 aa12.36□□□□□ -0.43
LINC01088-207ENST00000511241 UPP2O95045 317 aa12.35□□□□□ -0.43
LINC01088-207ENST00000511241 RELBQ01201 579 aa12.35□□□□□ -0.43
LINC01088-207ENST00000511241 KCTD17Q8N5Z5 321 aa12.35□□□□□ -0.43
LINC01088-207ENST00000511241 CNKSR1Q969H4 720 aa12.35□□□□□ -0.43
LINC01088-207ENST00000511241 HINFPQ9BQA5 517 aa12.35□□□□□ -0.43
LINC01088-207ENST00000511241 ABCC2Q92887 1545 aa12.35□□□□□ -0.43
LINC01088-207ENST00000511241 UGGT2Q9NYU1 1516 aa12.34□□□□□ -0.43
LINC01088-207ENST00000511241 CARNS1A5YM72 827 aa12.34□□□□□ -0.43
LINC01088-207ENST00000511241 BRD1O95696 1058 aa12.34□□□□□ -0.43
LINC01088-207ENST00000511241 STAU1O95793 577 aaKnown RBP12.34□□□□□ -0.43
LINC01088-207ENST00000511241 IL2RAP01589 272 aa12.34□□□□□ -0.43
LINC01088-207ENST00000511241 NLRP3Q96P20 1036 aa12.34□□□□□ -0.43
LINC01088-207ENST00000511241 RAB6BQ9NRW1 208 aa12.34□□□□□ -0.43
LINC01088-207ENST00000511241 SMTNP53814 917 aa12.33□□□□□ -0.44
LINC01088-207ENST00000511241 TSEN2Q8NCE0 465 aaKnown RBP12.33□□□□□ -0.44
LINC01088-207ENST00000511241 SERTAD1Q9UHV2 236 aa12.33□□□□□ -0.44
LINC01088-207ENST00000511241 HRH3Q9Y5N1 445 aa12.33□□□□□ -0.44
LINC01088-207ENST00000511241 ASXL2Q76L83 1435 aa12.33□□□□□ -0.44
LINC01088-207ENST00000511241 UACAQ9BZF9 1416 aa12.33□□□□□ -0.44
LINC01088-207ENST00000511241 A6NJY4 79 aa12.31□□□□□ -0.44
LINC01088-207ENST00000511241 MEN1O00255 615 aa12.31□□□□□ -0.44
LINC01088-207ENST00000511241 MTFR1Q15390 333 aa12.31□□□□□ -0.44
LINC01088-207ENST00000511241 LINC00528Q8N1L1 170 aa12.31□□□□□ -0.44
LINC01088-207ENST00000511241 CRIPAKQ8N1N5 446 aa12.31□□□□□ -0.44
LINC01088-207ENST00000511241 ZNF395Q9H8N7 513 aaPredicted RBP12.31□□□□□ -0.44
LINC01088-207ENST00000511241 UHRF1BP1LA0JNW5 1464 aa12.31□□□□□ -0.44
LINC01088-207ENST00000511241 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
LINC01088-207ENST00000511241 TSPOAP1O95153 1857 aa12.3□□□□□ -0.44
LINC01088-207ENST00000511241 PRXQ9BXM0 1461 aa12.3□□□□□ -0.44
LINC01088-207ENST00000511241 PATL2C9JE40 543 aaKnown RBP12.3□□□□□ -0.44
LINC01088-207ENST00000511241 SPINT1O43278 529 aa12.3□□□□□ -0.44
LINC01088-207ENST00000511241 GPC1P35052 558 aa12.3□□□□□ -0.44
LINC01088-207ENST00000511241 EPHA4P54764 986 aa12.3□□□□□ -0.44
LINC01088-207ENST00000511241 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
LINC01088-207ENST00000511241 AXIN1O15169 862 aa12.29□□□□□ -0.44
LINC01088-207ENST00000511241 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
LINC01088-207ENST00000511241 SSFA2P28290 1259 aa12.29□□□□□ -0.44
LINC01088-207ENST00000511241 CENPCQ03188 943 aa12.29□□□□□ -0.44
LINC01088-207ENST00000511241 TLR1Q15399 786 aa12.29□□□□□ -0.44
LINC01088-207ENST00000511241 MRPL14Q6P1L8 145 aaKnown RBP12.29□□□□□ -0.44
LINC01088-207ENST00000511241 TNS4Q8IZW8 715 aa12.29□□□□□ -0.44
LINC01088-207ENST00000511241 PLB1Q6P1J6 1458 aa12.28□□□□□ -0.44
LINC01088-207ENST00000511241 CDK2AP1O14519 115 aa12.28□□□□□ -0.44
LINC01088-207ENST00000511241 WEE1P30291 646 aa12.28□□□□□ -0.44
LINC01088-207ENST00000511241 SCARF1Q14162 830 aa12.28□□□□□ -0.44
LINC01088-207ENST00000511241 C1orf216Q8TAB5 229 aa12.28□□□□□ -0.44
LINC01088-207ENST00000511241 SCHIP1Q9P0W5 487 aaPredicted RBP12.28□□□□□ -0.44
LINC01088-207ENST00000511241 SLAIN2Q9P270 581 aa12.28□□□□□ -0.44
LINC01088-207ENST00000511241 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.44
LINC01088-207ENST00000511241 PRMT3O60678 531 aa12.27□□□□□ -0.45
LINC01088-207ENST00000511241 IGFBP4P22692 258 aa12.27□□□□□ -0.45
LINC01088-207ENST00000511241 RNF144AP50876 292 aaPredicted RBP12.27□□□□□ -0.45
LINC01088-207ENST00000511241 NBPF15Q8N660 670 aa12.27□□□□□ -0.45
LINC01088-207ENST00000511241 IRX2Q9BZI1 471 aaPredicted RBP12.27□□□□□ -0.45
LINC01088-207ENST00000511241 FHDC1Q9C0D6 1143 aaPredicted RBP12.27□□□□□ -0.45
LINC01088-207ENST00000511241 BMP2P12643 396 aa12.26□□□□□ -0.45
LINC01088-207ENST00000511241 FOXK2Q01167 660 aa12.26□□□□□ -0.45
LINC01088-207ENST00000511241 KCNA1Q09470 495 aa12.26□□□□□ -0.45
LINC01088-207ENST00000511241 OCLNQ16625 522 aa12.26□□□□□ -0.45
LINC01088-207ENST00000511241 CXXC1Q9P0U4 656 aaPredicted RBP12.26□□□□□ -0.45
LINC01088-207ENST00000511241 ATAD2Q6PL18 1390 aa12.26□□□□□ -0.45
LINC01088-207ENST00000511241 KDM6BO15054 1643 aa12.26□□□□□ -0.45
LINC01088-207ENST00000511241 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
LINC01088-207ENST00000511241 PRIMPOLQ96LW4 560 aa12.25□□□□□ -0.45
LINC01088-207ENST00000511241 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
LINC01088-207ENST00000511241 EPRSP07814 1512 aaKnown RBP12.25□□□□□ -0.45
LINC01088-207ENST00000511241 ZCCHC11Q5TAX3 1644 aaKnown RBP12.24□□□□□ -0.45
LINC01088-207ENST00000511241 PPRC1Q5VV67 1664 aaKnown RBP12.24□□□□□ -0.45
LINC01088-207ENST00000511241 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
LINC01088-207ENST00000511241 INSM2Q96T92 566 aaPredicted RBP12.24□□□□□ -0.45
LINC01088-207ENST00000511241 GRIP2Q9C0E4 1043 aa12.24□□□□□ -0.45
LINC01088-207ENST00000511241 TSPAN10Q9H1Z9 355 aaPredicted RBP12.24□□□□□ -0.45
LINC01088-207ENST00000511241 CTTNBP2Q8WZ74 1663 aa12.23□□□□□ -0.45
LINC01088-207ENST00000511241 GLI2P10070 1586 aa12.23□□□□□ -0.45
LINC01088-207ENST00000511241 COL17A1Q9UMD9 1497 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-207ENST00000511241 FOXO3O43524 673 aa12.23□□□□□ -0.45
LINC01088-207ENST00000511241 PHLDB3Q6NSJ2 640 aa12.23□□□□□ -0.45
LINC01088-207ENST00000511241 PPARGC1BQ86YN6 1023 aaKnown RBP12.23□□□□□ -0.45
LINC01088-207ENST00000511241 SLC9A9Q8IVB4 645 aa12.23□□□□□ -0.45
LINC01088-207ENST00000511241 FAM9AQ8IZU1 332 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-207ENST00000511241 STAG2Q8N3U4 1231 aa12.23□□□□□ -0.45
LINC01088-207ENST00000511241 SCG3Q8WXD2 468 aaKnown RBP12.23□□□□□ -0.45
LINC01088-207ENST00000511241 POLMQ9NP87 494 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-207ENST00000511241 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
LINC01088-207ENST00000511241 C6orf118Q5T5N4 469 aa12.22□□□□□ -0.45
LINC01088-207ENST00000511241 TAS1R3Q7RTX0 852 aa12.22□□□□□ -0.45
LINC01088-207ENST00000511241 IQSEC3Q9UPP2 1182 aaPredicted RBP12.22□□□□□ -0.45
LINC01088-207ENST00000511241 ZBTB7CA1YPR0 619 aa12.21□□□□□ -0.45
LINC01088-207ENST00000511241 LGR5O75473 907 aa12.21□□□□□ -0.45
LINC01088-207ENST00000511241 ARID4AP29374 1257 aaPredicted RBP12.21□□□□□ -0.45
LINC01088-207ENST00000511241 TMEM214Q6NUQ4 689 aaKnown RBP12.21□□□□□ -0.45
LINC01088-207ENST00000511241 TRIM46Q7Z4K8 759 aa12.21□□□□□ -0.45
LINC01088-207ENST00000511241 AAASQ9NRG9 546 aa12.21□□□□□ -0.45
LINC01088-207ENST00000511241 CHMP3Q9Y3E7 222 aa12.21□□□□□ -0.45
LINC01088-207ENST00000511241 ABCA8O94911 1581 aa12.21□□□□□ -0.46
LINC01088-207ENST00000511241 C21orf2O43822 256 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms