RNA–Protein interactions for RNA: ENST00000511161.5

CCND3-214, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-214ENST00000511161 ZNF330Q9Y3S2 320 aaPredicted RBP24.3■■□□□ 1.48
CCND3-214ENST00000511161 COL15A1P39059 1388 aa24.29■■□□□ 1.48
CCND3-214ENST00000511161 C10orf71Q711Q0 1435 aa24.29■■□□□ 1.48
CCND3-214ENST00000511161 BTBD11A6QL63 1104 aa24.29■■□□□ 1.48
CCND3-214ENST00000511161 FCHSD2O94868 740 aa24.29■■□□□ 1.48
CCND3-214ENST00000511161 DPEP1P16444 411 aa24.29■■□□□ 1.48
CCND3-214ENST00000511161 DDX10Q13206 875 aaKnown RBP24.28■■□□□ 1.48
CCND3-214ENST00000511161 VSIG10Q8N0Z9 540 aa24.28■■□□□ 1.48
CCND3-214ENST00000511161 BCS1LQ9Y276 419 aa24.28■■□□□ 1.48
CCND3-214ENST00000511161 RTF1Q92541 710 aaKnown RBP24.27■■□□□ 1.48
CCND3-214ENST00000511161 CEMIPQ8WUJ3 1361 aa24.27■■□□□ 1.48
CCND3-214ENST00000511161 HEG1Q9ULI3 1381 aa24.27■■□□□ 1.48
CCND3-214ENST00000511161 STARD3NLO95772 234 aa24.26■■□□□ 1.47
CCND3-214ENST00000511161 TGFB2P61812 414 aa24.25■■□□□ 1.47
CCND3-214ENST00000511161 FMNL2Q96PY5 1086 aa24.25■■□□□ 1.47
CCND3-214ENST00000511161 NARFQ9UHQ1 456 aa24.25■■□□□ 1.47
CCND3-214ENST00000511161 PRAMEF22A3QJZ6 481 aa24.24■■□□□ 1.47
CCND3-214ENST00000511161 POLRMTO00411 1230 aaKnown RBP24.24■■□□□ 1.47
CCND3-214ENST00000511161 PIP4K2AP48426 406 aaPredicted RBP24.24■■□□□ 1.47
CCND3-214ENST00000511161 BICDL1Q6ZP65 573 aa24.24■■□□□ 1.47
CCND3-214ENST00000511161 ZNF526Q8TF50 670 aaPredicted RBP24.24■■□□□ 1.47
CCND3-214ENST00000511161 A1BGP04217 495 aa24.23■■□□□ 1.47
CCND3-214ENST00000511161 TM4SF1P30408 202 aa24.23■■□□□ 1.47
CCND3-214ENST00000511161 NFIXQ14938 502 aa24.23■■□□□ 1.47
CCND3-214ENST00000511161 BCL2L12Q9HB09 334 aa24.23■■□□□ 1.47
CCND3-214ENST00000511161 MIS18AQ9NYP9 233 aa24.23■■□□□ 1.47
CCND3-214ENST00000511161 DLG5Q8TDM6 1919 aa24.23■■□□□ 1.47
CCND3-214ENST00000511161 AFDNP55196 1824 aaKnown RBP24.22■■□□□ 1.47
CCND3-214ENST00000511161 CHRNA5P30532 468 aa24.22■■□□□ 1.47
CCND3-214ENST00000511161 TBC1D2BQ9UPU7 963 aa24.22■■□□□ 1.47
CCND3-214ENST00000511161 ATP10DQ9P241 1426 aa24.2■■□□□ 1.46
CCND3-214ENST00000511161 KCNA3P22001 575 aa24.2■■□□□ 1.46
CCND3-214ENST00000511161 EIF5P55010 431 aaKnown RBP24.2■■□□□ 1.46
CCND3-214ENST00000511161 BRCA1P38398 1863 aaKnown RBP24.19■■□□□ 1.46
CCND3-214ENST00000511161 NEFMP07197 916 aa24.19■■□□□ 1.46
CCND3-214ENST00000511161 ARHGAP27Q6ZUM4 889 aa24.19■■□□□ 1.46
CCND3-214ENST00000511161 TEX13AQ9BXU3 409 aaPredicted RBP24.19■■□□□ 1.46
CCND3-214ENST00000511161 USP16Q9Y5T5 823 aa24.19■■□□□ 1.46
CCND3-214ENST00000511161 THUMPD2Q9BTF0 503 aaKnown RBP24.18■■□□□ 1.46
CCND3-214ENST00000511161 GIGYF1O75420 1035 aaPredicted RBP24.17■■□□□ 1.46
CCND3-214ENST00000511161 SERPINB2P05120 415 aa24.16■■□□□ 1.46
CCND3-214ENST00000511161 CCDC24Q8N4L8 307 aa24.16■■□□□ 1.46
CCND3-214ENST00000511161 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
CCND3-214ENST00000511161 A0A087WZG4 1122 aa24.15■■□□□ 1.46
CCND3-214ENST00000511161 TBC1D9BQ66K14 1250 aa24.15■■□□□ 1.46
CCND3-214ENST00000511161 PIM2Q9P1W9 311 aa24.15■■□□□ 1.46
CCND3-214ENST00000511161 HTATSF1O43719 755 aaKnown RBP24.14■■□□□ 1.45
CCND3-214ENST00000511161 C1QTNF8P60827 252 aa24.14■■□□□ 1.45
CCND3-214ENST00000511161 TAF7Q15545 349 aaPredicted RBP24.14■■□□□ 1.45
CCND3-214ENST00000511161 NPM2Q86SE8 214 aaKnown RBP24.14■■□□□ 1.45
CCND3-214ENST00000511161 MAPK8IP3Q9UPT6 1336 aa24.13■■□□□ 1.45
CCND3-214ENST00000511161 IL6STP40189 918 aaPredicted RBP24.13■■□□□ 1.45
CCND3-214ENST00000511161 RALBP1Q15311 655 aa24.13■■□□□ 1.45
CCND3-214ENST00000511161 SCN7AQ01118 1682 aa24.12■■□□□ 1.45
CCND3-214ENST00000511161 SNRPA1P09661 255 aaKnown RBP24.12■■□□□ 1.45
CCND3-214ENST00000511161 NFE2L2Q16236 605 aa24.12■■□□□ 1.45
CCND3-214ENST00000511161 DALRD3Q5D0E6 543 aaKnown RBP24.12■■□□□ 1.45
CCND3-214ENST00000511161 GPBP1L1Q9HC44 474 aaPredicted RBP24.12■■□□□ 1.45
CCND3-214ENST00000511161 CARMIL3Q8ND23 1372 aa24.12■■□□□ 1.45
CCND3-214ENST00000511161 NRXN2Q9P2S2 1712 aa24.11■■□□□ 1.45
CCND3-214ENST00000511161 ADCY9O60503 1353 aa24.11■■□□□ 1.45
CCND3-214ENST00000511161 ARFGEF1Q9Y6D6 1849 aa24.1■■□□□ 1.45
CCND3-214ENST00000511161 DZIP3Q86Y13 1208 aaKnown RBP24.1■■□□□ 1.45
CCND3-214ENST00000511161 CAMTA2O94983 1202 aa24.08■■□□□ 1.45
CCND3-214ENST00000511161 CCDC146Q8IYE0 955 aa24.08■■□□□ 1.45
CCND3-214ENST00000511161 KDM3BQ7LBC6 1761 aa24.07■■□□□ 1.44
CCND3-214ENST00000511161 SENP3-EIF4A1A0A087X0R7 540 aa24.07■■□□□ 1.44
CCND3-214ENST00000511161 NBPF26B4DH59 902 aa24.07■■□□□ 1.44
CCND3-214ENST00000511161 NBPF10Q6P3W6 841 aaKnown RBP24.07■■□□□ 1.44
CCND3-214ENST00000511161 C2CD5Q86YS7 1000 aa24.07■■□□□ 1.44
CCND3-214ENST00000511161 NGEFQ8N5V2 710 aa24.07■■□□□ 1.44
CCND3-214ENST00000511161 NBPF15Q8N660 670 aa24.07■■□□□ 1.44
CCND3-214ENST00000511161 BCORQ6W2J9 1755 aa24.06■■□□□ 1.44
CCND3-214ENST00000511161 PNNQ9H307 717 aaKnown RBP24.06■■□□□ 1.44
CCND3-214ENST00000511161 RRP7AQ9Y3A4 280 aaKnown RBP24.06■■□□□ 1.44
CCND3-214ENST00000511161 MYBBP1AQ9BQG0 1328 aaKnown RBP24.06■■□□□ 1.44
CCND3-214ENST00000511161 ANKRD31Q8N7Z5 1873 aa24.05■■□□□ 1.44
CCND3-214ENST00000511161 NPHP1O15259 732 aa24.05■■□□□ 1.44
CCND3-214ENST00000511161 RIPK4P57078 832 aa24.05■■□□□ 1.44
CCND3-214ENST00000511161 NEUROD2Q15784 382 aa24.04■■□□□ 1.44
CCND3-214ENST00000511161 C9orf131Q5VYM1 1079 aa24.04■■□□□ 1.44
CCND3-214ENST00000511161 PRR5LQ6MZQ0 368 aa24.04■■□□□ 1.44
CCND3-214ENST00000511161 SETDB2Q96T68 719 aa24.04■■□□□ 1.44
CCND3-214ENST00000511161 ZNF219Q9P2Y4 722 aaPredicted RBP24.03■■□□□ 1.44
CCND3-214ENST00000511161 LAMB4A4D0S4 1761 aa24.03■■□□□ 1.44
CCND3-214ENST00000511161 DLEC1Q9Y238 1755 aa24.03■■□□□ 1.44
CCND3-214ENST00000511161 FAM177BA6PVY3 158 aa24.02■■□□□ 1.44
CCND3-214ENST00000511161 H0YIN7 160 aa24.02■■□□□ 1.44
CCND3-214ENST00000511161 ZNF622Q969S3 477 aaKnown RBP eCLIP24.02■■□□□ 1.44
CCND3-214ENST00000511161 EIF4A1P60842 406 aaKnown RBP24.01■■□□□ 1.43
CCND3-214ENST00000511161 RASSF7Q02833 373 aa24.01■■□□□ 1.43
CCND3-214ENST00000511161 PNISRQ8TF01 805 aaKnown RBP24.01■■□□□ 1.43
CCND3-214ENST00000511161 TTLL6Q8N841 843 aa24■■□□□ 1.43
CCND3-214ENST00000511161 CNBD1Q8NA66 436 aa24■■□□□ 1.43
CCND3-214ENST00000511161 RNF181Q9P0P0 153 aa24■■□□□ 1.43
CCND3-214ENST00000511161 COL11A2P13942 1736 aaPredicted RBP24■■□□□ 1.43
CCND3-214ENST00000511161 CACNA1SQ13698 1873 aa23.99■■□□□ 1.43
CCND3-214ENST00000511161 TMPOP42166 694 aaKnown RBP23.99■■□□□ 1.43
CCND3-214ENST00000511161 TSPYL4Q9UJ04 414 aa23.99■■□□□ 1.43
CCND3-214ENST00000511161 SBF1O95248 1867 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms