RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 HNRNPUQ00839 825 aaKnown RBP eCLIP7.12□□□□□ -1.27
PROM1-211ENST00000511153 NFE2L2Q16236 605 aa7.12□□□□□ -1.27
PROM1-211ENST00000511153 KDRP35968 1356 aa7.12□□□□□ -1.27
PROM1-211ENST00000511153 PKD1L3Q7Z443 1732 aa7.12□□□□□ -1.27
PROM1-211ENST00000511153 DOT1LQ8TEK3 1739 aa7.12□□□□□ -1.27
PROM1-211ENST00000511153 PCDH11XQ9BZA7 1347 aa7.12□□□□□ -1.27
PROM1-211ENST00000511153 PCDH11YQ9BZA8 1340 aa7.12□□□□□ -1.27
PROM1-211ENST00000511153 ONECUT3O60422 494 aaPredicted RBP7.12□□□□□ -1.27
PROM1-211ENST00000511153 SLC39A6Q13433 755 aa7.12□□□□□ -1.27
PROM1-211ENST00000511153 IFNL2Q8IZJ0 200 aa7.12□□□□□ -1.27
PROM1-211ENST00000511153 GAS2L2Q8NHY3 880 aa7.12□□□□□ -1.27
PROM1-211ENST00000511153 TOGARAM1Q9Y4F4 1720 aa7.11□□□□□ -1.27
PROM1-211ENST00000511153 KDM6AO15550 1401 aaPredicted RBP7.11□□□□□ -1.27
PROM1-211ENST00000511153 MAP3K5Q99683 1374 aa7.11□□□□□ -1.27
PROM1-211ENST00000511153 GNAT3A8MTJ3 354 aa7.11□□□□□ -1.27
PROM1-211ENST00000511153 RNMTO43148 476 aaKnown RBP7.11□□□□□ -1.27
PROM1-211ENST00000511153 KCNQ3O43525 872 aa7.11□□□□□ -1.27
PROM1-211ENST00000511153 AMOTQ4VCS5 1084 aa7.11□□□□□ -1.27
PROM1-211ENST00000511153 AKAP4Q5JQC9 854 aa7.11□□□□□ -1.27
PROM1-211ENST00000511153 IL17REQ8NFR9 667 aa7.11□□□□□ -1.27
PROM1-211ENST00000511153 RTF1Q92541 710 aaKnown RBP7.11□□□□□ -1.27
PROM1-211ENST00000511153 CDCA7Q9BWT1 371 aaPredicted RBP7.11□□□□□ -1.27
PROM1-211ENST00000511153 OCEL1Q9H607 264 aa7.11□□□□□ -1.27
PROM1-211ENST00000511153 CABP4P57796 275 aa7.1□□□□□ -1.27
PROM1-211ENST00000511153 DEFB132Q7Z7B7 95 aa7.1□□□□□ -1.27
PROM1-211ENST00000511153 NFATC2IPQ8NCF5 419 aa7.1□□□□□ -1.27
PROM1-211ENST00000511153 ASAP1Q9ULH1 1129 aa7.1□□□□□ -1.27
PROM1-211ENST00000511153 ITGB4P16144 1822 aa7.1□□□□□ -1.27
PROM1-211ENST00000511153 SBF2Q86WG5 1849 aa7.1□□□□□ -1.27
PROM1-211ENST00000511153 SMIM5Q71RC9 77 aa7.09□□□□□ -1.27
PROM1-211ENST00000511153 PIGBQ92521 554 aa7.09□□□□□ -1.27
PROM1-211ENST00000511153 PNNQ9H307 717 aaKnown RBP7.09□□□□□ -1.27
PROM1-211ENST00000511153 PTCD1O75127 700 aaKnown RBP7.08□□□□□ -1.28
PROM1-211ENST00000511153 APBA3O96018 575 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 TEFQ10587 303 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 KRT24Q2M2I5 525 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 IER5LQ5T953 404 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 FAM196AQ6ZSG2 479 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 TSR2Q969E8 191 aaKnown RBP7.08□□□□□ -1.28
PROM1-211ENST00000511153 CDCA7LQ96GN5 454 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 TMOD3Q9NYL9 352 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 SCN11AQ9UI33 1791 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 ELL2O00472 640 aaPredicted RBP7.08□□□□□ -1.28
PROM1-211ENST00000511153 TCERG1O14776 1098 aaKnown RBP7.08□□□□□ -1.28
PROM1-211ENST00000511153 SEC24BO95487 1268 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 PLCG2P16885 1265 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 EN1Q05925 392 aaPredicted RBP7.08□□□□□ -1.28
PROM1-211ENST00000511153 MICALL2Q8IY33 904 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 NECTIN2Q92692 538 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 DCAF5Q96JK2 942 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 METRNQ9UJH8 293 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 BTAF1O14981 1849 aa7.08□□□□□ -1.28
PROM1-211ENST00000511153 PRAMEF22A3QJZ6 481 aa7.07□□□□□ -1.28
PROM1-211ENST00000511153 BTBD11A6QL63 1104 aa7.07□□□□□ -1.28
PROM1-211ENST00000511153 PIP4K2AP48426 406 aaPredicted RBP7.07□□□□□ -1.28
PROM1-211ENST00000511153 SLC52A2Q9HAB3 445 aa7.07□□□□□ -1.28
PROM1-211ENST00000511153 ATG3Q9NT62 314 aa7.07□□□□□ -1.28
PROM1-211ENST00000511153 HSP90AB1P08238 724 aaKnown RBP7.06□□□□□ -1.28
PROM1-211ENST00000511153 SF3B2Q13435 895 aaKnown RBP7.06□□□□□ -1.28
PROM1-211ENST00000511153 EZH2Q15910 746 aaKnown RBP7.06□□□□□ -1.28
PROM1-211ENST00000511153 WWC1Q8IX03 1113 aa7.06□□□□□ -1.28
PROM1-211ENST00000511153 SLC39A7Q92504 469 aa7.06□□□□□ -1.28
PROM1-211ENST00000511153 LARP6Q9BRS8 491 aaKnown RBP7.06□□□□□ -1.28
PROM1-211ENST00000511153 TSPYL4Q9UJ04 414 aa7.06□□□□□ -1.28
PROM1-211ENST00000511153 UPF1Q92900 1129 aaKnown RBP eCLIP7.05□□□□□ -1.28
PROM1-211ENST00000511153 BOLA1Q9Y3E2 137 aa7.05□□□□□ -1.28
PROM1-211ENST00000511153 NHSQ6T4R5 1651 aa7.05□□□□□ -1.28
PROM1-211ENST00000511153 ERVV-2B6SEH9 535 aa7.04□□□□□ -1.28
PROM1-211ENST00000511153 C7P10643 843 aa7.04□□□□□ -1.28
PROM1-211ENST00000511153 LMOD3Q0VAK6 560 aa7.04□□□□□ -1.28
PROM1-211ENST00000511153 TAF7Q15545 349 aaPredicted RBP7.04□□□□□ -1.28
PROM1-211ENST00000511153 MBIPQ9NS73 344 aa7.04□□□□□ -1.28
PROM1-211ENST00000511153 DAXXQ9UER7 740 aaPredicted RBP7.04□□□□□ -1.28
PROM1-211ENST00000511153 TNS1Q9HBL0 1735 aaKnown RBP7.04□□□□□ -1.28
PROM1-211ENST00000511153 PALLDQ8WX93 1383 aa7.04□□□□□ -1.28
PROM1-211ENST00000511153 BCL9O00512 1426 aa7.04□□□□□ -1.28
PROM1-211ENST00000511153 SIPA1L3O60292 1781 aaPredicted RBP7.04□□□□□ -1.28
PROM1-211ENST00000511153 EIF2S2P20042 333 aaKnown RBP7.03□□□□□ -1.28
PROM1-211ENST00000511153 TTC5Q8N0Z6 440 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 NGEFQ8N5V2 710 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 ZNF428Q96B54 188 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 ZNF496Q96IT1 587 aaPredicted RBP7.03□□□□□ -1.28
PROM1-211ENST00000511153 SLC4A9Q96Q91 983 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 CRISPLD2Q9H0B8 497 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 ZNF330Q9Y3S2 320 aaPredicted RBP7.03□□□□□ -1.28
PROM1-211ENST00000511153 CEMIPQ8WUJ3 1361 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 ANXA1P04083 346 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 ATP6V1AP38606 617 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 ITPK1Q13572 414 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 ZNF790Q6PG37 636 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 TMEM92Q6UXU6 159 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 DNAJC10Q8IXB1 793 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 TSPYL6Q8N831 410 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 C8orf58Q8NAV2 365 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 ARXQ96QS3 562 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 TMEM121BQ9BXQ6 578 aaPredicted RBP7.03□□□□□ -1.28
PROM1-211ENST00000511153 LRRC4BQ9NT99 713 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 WDR70Q9NW82 654 aa7.03□□□□□ -1.28
PROM1-211ENST00000511153 CCNL1Q9UK58 526 aaPredicted RBP7.03□□□□□ -1.28
PROM1-211ENST00000511153 LOC102724428A0A0B4J2F2 783 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms