RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 C4AP0C0L4 1744 aa16.18■□□□□ 0.18
CLDND1-223ENST00000511081 SOS1Q07889 1333 aaPredicted RBP16.18■□□□□ 0.18
CLDND1-223ENST00000511081 USP42Q9H9J4 1324 aaKnown RBP16.18■□□□□ 0.18
CLDND1-223ENST00000511081 GRIN3BO60391 1043 aa16.17■□□□□ 0.18
CLDND1-223ENST00000511081 TM4SF1P30408 202 aa16.17■□□□□ 0.18
CLDND1-223ENST00000511081 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
CLDND1-223ENST00000511081 TEX13AQ9BXU3 409 aaPredicted RBP16.17■□□□□ 0.18
CLDND1-223ENST00000511081 HEG1Q9ULI3 1381 aa16.16■□□□□ 0.18
CLDND1-223ENST00000511081 STARD3NLO95772 234 aa16.16■□□□□ 0.18
CLDND1-223ENST00000511081 SRP68Q9UHB9 627 aaKnown RBP16.16■□□□□ 0.18
CLDND1-223ENST00000511081 KIF13BQ9NQT8 1826 aa16.16■□□□□ 0.18
CLDND1-223ENST00000511081 BTBD11A6QL63 1104 aa16.15■□□□□ 0.18
CLDND1-223ENST00000511081 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
CLDND1-223ENST00000511081 TGFB2P61812 414 aa16.15■□□□□ 0.18
CLDND1-223ENST00000511081 FKBP8Q14318 412 aa16.15■□□□□ 0.18
CLDND1-223ENST00000511081 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
CLDND1-223ENST00000511081 NARFQ9UHQ1 456 aa16.15■□□□□ 0.18
CLDND1-223ENST00000511081 ZBTB1Q9Y2K1 713 aa16.15■□□□□ 0.18
CLDND1-223ENST00000511081 KCNQ3O43525 872 aa16.14■□□□□ 0.17
CLDND1-223ENST00000511081 FMNL2Q96PY5 1086 aa16.14■□□□□ 0.17
CLDND1-223ENST00000511081 MCM10Q7L590 875 aa16.13■□□□□ 0.17
CLDND1-223ENST00000511081 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
CLDND1-223ENST00000511081 PARP3Q9Y6F1 533 aa16.13■□□□□ 0.17
CLDND1-223ENST00000511081 ZPR1O75312 459 aa16.12■□□□□ 0.17
CLDND1-223ENST00000511081 DCTN1Q14203 1278 aa16.12■□□□□ 0.17
CLDND1-223ENST00000511081 TAF7Q15545 349 aaPredicted RBP16.12■□□□□ 0.17
CLDND1-223ENST00000511081 BCL2L12Q9HB09 334 aa16.12■□□□□ 0.17
CLDND1-223ENST00000511081 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
CLDND1-223ENST00000511081 KIAA1551Q9HCM1 1747 aa16.11■□□□□ 0.17
CLDND1-223ENST00000511081 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
CLDND1-223ENST00000511081 DDR1Q08345 913 aa16.11■□□□□ 0.17
CLDND1-223ENST00000511081 NFE2L2Q16236 605 aa16.11■□□□□ 0.17
CLDND1-223ENST00000511081 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
CLDND1-223ENST00000511081 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
CLDND1-223ENST00000511081 ZNF784Q8NCA9 323 aaPredicted RBP16.11■□□□□ 0.17
CLDND1-223ENST00000511081 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
CLDND1-223ENST00000511081 COL15A1P39059 1388 aa16.11■□□□□ 0.17
CLDND1-223ENST00000511081 DLG5Q8TDM6 1919 aa16.1■□□□□ 0.17
CLDND1-223ENST00000511081 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
CLDND1-223ENST00000511081 NEFMP07197 916 aa16.1■□□□□ 0.17
CLDND1-223ENST00000511081 CANXP27824 592 aaKnown RBP16.1■□□□□ 0.17
CLDND1-223ENST00000511081 IL6STP40189 918 aaPredicted RBP16.1■□□□□ 0.17
CLDND1-223ENST00000511081 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
CLDND1-223ENST00000511081 PXDNLA1KZ92 1463 aa16.1■□□□□ 0.17
CLDND1-223ENST00000511081 A0A087WZG4 1122 aa16.09■□□□□ 0.17
CLDND1-223ENST00000511081 A1BGP04217 495 aa16.09■□□□□ 0.17
CLDND1-223ENST00000511081 KCNA3P22001 575 aa16.09■□□□□ 0.17
CLDND1-223ENST00000511081 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
CLDND1-223ENST00000511081 SNRPA1P09661 255 aaKnown RBP16.08■□□□□ 0.16
CLDND1-223ENST00000511081 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
CLDND1-223ENST00000511081 NFIXQ14938 502 aa16.08■□□□□ 0.16
CLDND1-223ENST00000511081 PRKRIP1Q9H875 184 aaPredicted RBP16.07■□□□□ 0.16
CLDND1-223ENST00000511081 DPEP1P16444 411 aa16.06■□□□□ 0.16
CLDND1-223ENST00000511081 PNISRQ8TF01 805 aaKnown RBP16.06■□□□□ 0.16
CLDND1-223ENST00000511081 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
CLDND1-223ENST00000511081 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
CLDND1-223ENST00000511081 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
CLDND1-223ENST00000511081 MIS18AQ9NYP9 233 aa16.05■□□□□ 0.16
CLDND1-223ENST00000511081 BRCA1P38398 1863 aaKnown RBP16.04■□□□□ 0.16
CLDND1-223ENST00000511081 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
CLDND1-223ENST00000511081 AFDNP55196 1824 aaKnown RBP16.04■□□□□ 0.16
CLDND1-223ENST00000511081 CAMTA2O94983 1202 aa16.03■□□□□ 0.16
CLDND1-223ENST00000511081 SERPINB2P05120 415 aa16.03■□□□□ 0.16
CLDND1-223ENST00000511081 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
CLDND1-223ENST00000511081 EIF4A1P60842 406 aaKnown RBP16.03■□□□□ 0.16
CLDND1-223ENST00000511081 TBC1D2BQ9UPU7 963 aa16.03■□□□□ 0.16
CLDND1-223ENST00000511081 NBPF26B4DH59 902 aa16.02■□□□□ 0.16
CLDND1-223ENST00000511081 RGL2O15211 777 aa16.02■□□□□ 0.16
CLDND1-223ENST00000511081 GIGYF1O75420 1035 aaPredicted RBP16.02■□□□□ 0.16
CLDND1-223ENST00000511081 RIPK4P57078 832 aa16.02■□□□□ 0.16
CLDND1-223ENST00000511081 TBC1D9BQ66K14 1250 aa16.02■□□□□ 0.16
CLDND1-223ENST00000511081 NBPF10Q6P3W6 841 aaKnown RBP16.02■□□□□ 0.16
CLDND1-223ENST00000511081 NBPF15Q8N660 670 aa16.02■□□□□ 0.16
CLDND1-223ENST00000511081 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.16
CLDND1-223ENST00000511081 BABAM1Q9NWV8 329 aa16.02■□□□□ 0.16
CLDND1-223ENST00000511081 PIM2Q9P1W9 311 aa16.02■□□□□ 0.16
CLDND1-223ENST00000511081 KDM3BQ7LBC6 1761 aa16.01■□□□□ 0.15
CLDND1-223ENST00000511081 KCNA4P22459 653 aa16.01■□□□□ 0.15
CLDND1-223ENST00000511081 CLEC4GQ6UXB4 293 aa16.01■□□□□ 0.15
CLDND1-223ENST00000511081 WWC3Q9ULE0 1092 aa16.01■□□□□ 0.15
CLDND1-223ENST00000511081 ADAMTS8Q9UP79 889 aa16.01■□□□□ 0.15
CLDND1-223ENST00000511081 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
CLDND1-223ENST00000511081 BCS1LQ9Y276 419 aa16■□□□□ 0.15
CLDND1-223ENST00000511081 ADCY9O60503 1353 aa16■□□□□ 0.15
CLDND1-223ENST00000511081 SCN7AQ01118 1682 aa15.99■□□□□ 0.15
CLDND1-223ENST00000511081 CHRNA5P30532 468 aa15.99■□□□□ 0.15
CLDND1-223ENST00000511081 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
CLDND1-223ENST00000511081 RUNDC1Q96C34 613 aa15.99■□□□□ 0.15
CLDND1-223ENST00000511081 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
CLDND1-223ENST00000511081 PIP4K2AP48426 406 aaPredicted RBP15.98■□□□□ 0.15
CLDND1-223ENST00000511081 DALRD3Q5D0E6 543 aaKnown RBP15.98■□□□□ 0.15
CLDND1-223ENST00000511081 ABCB7O75027 752 aa15.97■□□□□ 0.15
CLDND1-223ENST00000511081 LMOD3Q0VAK6 560 aa15.97■□□□□ 0.15
CLDND1-223ENST00000511081 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLDND1-223ENST00000511081 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
CLDND1-223ENST00000511081 SETDB2Q96T68 719 aa15.97■□□□□ 0.15
CLDND1-223ENST00000511081 BRIP1Q9BX63 1249 aa15.97■□□□□ 0.15
CLDND1-223ENST00000511081 TRIM35Q9UPQ4 493 aa15.97■□□□□ 0.15
CLDND1-223ENST00000511081 PDZRN3Q9UPQ7 1066 aa15.97■□□□□ 0.15
CLDND1-223ENST00000511081 ZNF330Q9Y3S2 320 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms