RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 ECHDC1Q9NTX5 307 aa16.76■□□□□ 0.27
PRDM16-206ENST00000511072 CHPF2Q9P2E5 772 aa16.76■□□□□ 0.27
PRDM16-206ENST00000511072 PTPRCP08575 1304 aa16.76■□□□□ 0.27
PRDM16-206ENST00000511072 NSD2O96028 1365 aa16.76■□□□□ 0.27
PRDM16-206ENST00000511072 CCDC69A6NI79 296 aa16.76■□□□□ 0.27
PRDM16-206ENST00000511072 IPO4Q8TEX9 1081 aaKnown RBP16.76■□□□□ 0.27
PRDM16-206ENST00000511072 TERF1P54274 439 aa16.75■□□□□ 0.27
PRDM16-206ENST00000511072 KRT32Q14532 448 aa16.75■□□□□ 0.27
PRDM16-206ENST00000511072 LRRC59Q96AG4 307 aaKnown RBP16.75■□□□□ 0.27
PRDM16-206ENST00000511072 SERPINC1P01008 464 aa16.75■□□□□ 0.27
PRDM16-206ENST00000511072 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
PRDM16-206ENST00000511072 AIDAQ96BJ3 306 aa16.75■□□□□ 0.27
PRDM16-206ENST00000511072 ZNF830Q96NB3 372 aaPredicted RBP16.75■□□□□ 0.27
PRDM16-206ENST00000511072 CCDC43Q96MW1 224 aaKnown RBP16.75■□□□□ 0.27
PRDM16-206ENST00000511072 RAPGEF6Q8TEU7 1601 aa16.75■□□□□ 0.27
PRDM16-206ENST00000511072 MINDY4BA8MYZ0 360 aa16.74■□□□□ 0.27
PRDM16-206ENST00000511072 VAMP4O75379 141 aa16.74■□□□□ 0.27
PRDM16-206ENST00000511072 NUCB1Q02818 461 aa16.74■□□□□ 0.27
PRDM16-206ENST00000511072 JMYQ8N9B5 988 aa16.74■□□□□ 0.27
PRDM16-206ENST00000511072 UBAC1Q9BSL1 405 aa16.74■□□□□ 0.27
PRDM16-206ENST00000511072 CTNNA3Q9UI47 895 aa16.74■□□□□ 0.27
PRDM16-206ENST00000511072 NOL7Q9UMY1 257 aaKnown RBP16.74■□□□□ 0.27
PRDM16-206ENST00000511072 CCT2P78371 535 aaKnown RBP16.74■□□□□ 0.27
PRDM16-206ENST00000511072 HDAC1Q13547 482 aaPredicted RBP16.74■□□□□ 0.27
PRDM16-206ENST00000511072 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
PRDM16-206ENST00000511072 IL16Q14005 1332 aa16.74■□□□□ 0.27
PRDM16-206ENST00000511072 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
PRDM16-206ENST00000511072 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 CABLES1Q8TDN4 633 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 UTP14CQ5TAP6 766 aaKnown RBP16.73■□□□□ 0.27
PRDM16-206ENST00000511072 RAB11FIP4Q86YS3 637 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 PPP1R1BQ9UD71 204 aaPredicted RBP16.73■□□□□ 0.27
PRDM16-206ENST00000511072 TRMT112Q9UI30 125 aaKnown RBP16.73■□□□□ 0.27
PRDM16-206ENST00000511072 GOLIM4O00461 696 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 IFIT5Q13325 482 aaKnown RBP16.73■□□□□ 0.27
PRDM16-206ENST00000511072 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 ASXL1Q8IXJ9 1541 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 A2MP01023 1474 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 HAND2P61296 217 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 IMMTQ16891 758 aaKnown RBP16.73■□□□□ 0.27
PRDM16-206ENST00000511072 TAF3Q5VWG9 929 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 RHPN1Q8TCX5 695 aa16.73■□□□□ 0.27
PRDM16-206ENST00000511072 CFAP45Q9UL16 551 aa16.72■□□□□ 0.27
PRDM16-206ENST00000511072 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
PRDM16-206ENST00000511072 CKAP2LQ8IYA6 745 aa16.72■□□□□ 0.27
PRDM16-206ENST00000511072 LIMCH1Q9UPQ0 1083 aa16.72■□□□□ 0.27
PRDM16-206ENST00000511072 CERS3Q8IU89 383 aa16.72■□□□□ 0.27
PRDM16-206ENST00000511072 MRPL50Q8N5N7 158 aaKnown RBP16.72■□□□□ 0.27
PRDM16-206ENST00000511072 SLC3A2P08195 630 aaKnown RBP16.71■□□□□ 0.27
PRDM16-206ENST00000511072 PRIM1P49642 420 aaKnown RBP16.71■□□□□ 0.27
PRDM16-206ENST00000511072 PDE1AP54750 535 aa16.71■□□□□ 0.27
PRDM16-206ENST00000511072 IGHMBP2P38935 993 aaKnown RBP16.71■□□□□ 0.27
PRDM16-206ENST00000511072 ZSCAN25Q6NSZ9 544 aa16.71■□□□□ 0.27
PRDM16-206ENST00000511072 DDX46Q7L014 1031 aaKnown RBP16.71■□□□□ 0.27
PRDM16-206ENST00000511072 PPP1R9BQ96SB3 815 aa16.71■□□□□ 0.27
PRDM16-206ENST00000511072 COPS6Q7L5N1 327 aa16.7■□□□□ 0.26
PRDM16-206ENST00000511072 PA2G4Q9UQ80 394 aaKnown RBP16.7■□□□□ 0.26
PRDM16-206ENST00000511072 CCDC66A2RUB6 948 aa16.7■□□□□ 0.26
PRDM16-206ENST00000511072 ZSCAN20P17040 1043 aaPredicted RBP16.7■□□□□ 0.26
PRDM16-206ENST00000511072 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
PRDM16-206ENST00000511072 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
PRDM16-206ENST00000511072 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
PRDM16-206ENST00000511072 CCDC70Q6NSX1 233 aa16.7■□□□□ 0.26
PRDM16-206ENST00000511072 IFNL2Q8IZJ0 200 aa16.7■□□□□ 0.26
PRDM16-206ENST00000511072 ANKRD44Q8N8A2 993 aa16.7■□□□□ 0.26
PRDM16-206ENST00000511072 ARHGAP45Q92619 1136 aa16.7■□□□□ 0.26
PRDM16-206ENST00000511072 RBSNQ9H1K0 784 aa16.7■□□□□ 0.26
PRDM16-206ENST00000511072 LDHAL6AQ6ZMR3 332 aa16.7■□□□□ 0.26
PRDM16-206ENST00000511072 PZPP20742 1482 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 KLHL40Q2TBA0 621 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 ANKRD13DQ6ZTN6 518 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 NECAB1Q8N987 351 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 LRRC2Q9BYS8 371 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 ZHX3Q9H4I2 956 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 A0A1W2PP64 1363 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 TNRQ92752 1358 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 MAP3K11Q16584 847 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRDM16-206ENST00000511072 GPS2Q13227 327 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 EYA1Q99502 592 aa16.69■□□□□ 0.26
PRDM16-206ENST00000511072 TXLNAP40222 546 aa16.68■□□□□ 0.26
PRDM16-206ENST00000511072 USP25Q9UHP3 1055 aa16.68■□□□□ 0.26
PRDM16-206ENST00000511072 NAPBQ9H115 298 aa16.68■□□□□ 0.26
PRDM16-206ENST00000511072 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
PRDM16-206ENST00000511072 C17orf53Q8N3J3 647 aaPredicted RBP16.67■□□□□ 0.26
PRDM16-206ENST00000511072 CDK5RAP3Q96JB5 506 aa16.67■□□□□ 0.26
PRDM16-206ENST00000511072 CEP57L1Q8IYX8 460 aa16.67■□□□□ 0.26
PRDM16-206ENST00000511072 TMX3Q96JJ7 454 aa16.67■□□□□ 0.26
PRDM16-206ENST00000511072 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
PRDM16-206ENST00000511072 FILIP1LQ4L180 1135 aa16.67■□□□□ 0.26
PRDM16-206ENST00000511072 TCOF1Q13428 1488 aaKnown RBP16.66■□□□□ 0.26
PRDM16-206ENST00000511072 SSBP05455 408 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRDM16-206ENST00000511072 EPS15P42566 896 aa16.66■□□□□ 0.26
PRDM16-206ENST00000511072 RBM5P52756 815 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRDM16-206ENST00000511072 ZSCAN29Q8IWY8 852 aaPredicted RBP16.66■□□□□ 0.26
PRDM16-206ENST00000511072 AKAP2Q9Y2D5 859 aa16.66■□□□□ 0.26
PRDM16-206ENST00000511072 DUOX2Q9NRD8 1548 aa16.66■□□□□ 0.26
PRDM16-206ENST00000511072 KCNA6P17658 529 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms