RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 FKBP8Q14318 412 aa16.08■□□□□ 0.16
CHFR-208ENST00000511001 TTC5Q8N0Z6 440 aa16.08■□□□□ 0.16
CHFR-208ENST00000511001 PXDNLA1KZ92 1463 aa16.08■□□□□ 0.16
CHFR-208ENST00000511001 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
CHFR-208ENST00000511001 COL15A1P39059 1388 aa16.06■□□□□ 0.16
CHFR-208ENST00000511001 GRIN3BO60391 1043 aa16.06■□□□□ 0.16
CHFR-208ENST00000511001 DDR1Q08345 913 aa16.06■□□□□ 0.16
CHFR-208ENST00000511001 MCM10Q7L590 875 aa16.06■□□□□ 0.16
CHFR-208ENST00000511001 PLEKHF1Q96S99 279 aa16.06■□□□□ 0.16
CHFR-208ENST00000511001 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
CHFR-208ENST00000511001 DCTN1Q14203 1278 aa16.05■□□□□ 0.16
CHFR-208ENST00000511001 RALBP1Q15311 655 aa16.05■□□□□ 0.16
CHFR-208ENST00000511001 USPL1Q5W0Q7 1092 aa16.05■□□□□ 0.16
CHFR-208ENST00000511001 PARP3Q9Y6F1 533 aa16.05■□□□□ 0.16
CHFR-208ENST00000511001 BTBD11A6QL63 1104 aa16.04■□□□□ 0.16
CHFR-208ENST00000511001 HTATSF1O43719 755 aaKnown RBP16.04■□□□□ 0.16
CHFR-208ENST00000511001 TM4SF1P30408 202 aa16.04■□□□□ 0.16
CHFR-208ENST00000511001 FMNL2Q96PY5 1086 aa16.04■□□□□ 0.16
CHFR-208ENST00000511001 BCL2L12Q9HB09 334 aa16.04■□□□□ 0.16
CHFR-208ENST00000511001 NARFQ9UHQ1 456 aa16.04■□□□□ 0.16
CHFR-208ENST00000511001 WWC3Q9ULE0 1092 aa16.04■□□□□ 0.16
CHFR-208ENST00000511001 KDM3BQ7LBC6 1761 aa16.04■□□□□ 0.16
CHFR-208ENST00000511001 SCN7AQ01118 1682 aa16.03■□□□□ 0.16
CHFR-208ENST00000511001 STARD3NLO95772 234 aa16.03■□□□□ 0.16
CHFR-208ENST00000511001 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
CHFR-208ENST00000511001 EIF5P55010 431 aaKnown RBP16.03■□□□□ 0.16
CHFR-208ENST00000511001 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
CHFR-208ENST00000511001 ATP10DQ9P241 1426 aa16.02■□□□□ 0.16
CHFR-208ENST00000511001 POLRMTO00411 1230 aaKnown RBP16.02■□□□□ 0.16
CHFR-208ENST00000511001 ZPR1O75312 459 aa16.02■□□□□ 0.16
CHFR-208ENST00000511001 TGFB2P61812 414 aa16.02■□□□□ 0.16
CHFR-208ENST00000511001 RTF1Q92541 710 aaKnown RBP16.02■□□□□ 0.16
CHFR-208ENST00000511001 TEX13AQ9BXU3 409 aaPredicted RBP16.02■□□□□ 0.16
CHFR-208ENST00000511001 BCORQ6W2J9 1755 aa16.02■□□□□ 0.15
CHFR-208ENST00000511001 A0A0G2JLW4 131 aa16.01■□□□□ 0.15
CHFR-208ENST00000511001 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
CHFR-208ENST00000511001 PRAMEF22A3QJZ6 481 aa16■□□□□ 0.15
CHFR-208ENST00000511001 A1BGP04217 495 aa16■□□□□ 0.15
CHFR-208ENST00000511001 DPEP1P16444 411 aa16■□□□□ 0.15
CHFR-208ENST00000511001 KCNA3P22001 575 aa16■□□□□ 0.15
CHFR-208ENST00000511001 NFIXQ14938 502 aa16■□□□□ 0.15
CHFR-208ENST00000511001 USP16Q9Y5T5 823 aa16■□□□□ 0.15
CHFR-208ENST00000511001 NFE2L2Q16236 605 aa15.99■□□□□ 0.15
CHFR-208ENST00000511001 MYBBP1AQ9BQG0 1328 aaKnown RBP15.98■□□□□ 0.15
CHFR-208ENST00000511001 DLEC1Q9Y238 1755 aa15.98■□□□□ 0.15
CHFR-208ENST00000511001 IL6STP40189 918 aaPredicted RBP15.98■□□□□ 0.15
CHFR-208ENST00000511001 TAF7Q15545 349 aaPredicted RBP15.98■□□□□ 0.15
CHFR-208ENST00000511001 ANKRD31Q8N7Z5 1873 aa15.98■□□□□ 0.15
CHFR-208ENST00000511001 A0A087WZG4 1122 aa15.97■□□□□ 0.15
CHFR-208ENST00000511001 NEFMP07197 916 aa15.97■□□□□ 0.15
CHFR-208ENST00000511001 THUMPD2Q9BTF0 503 aaKnown RBP15.97■□□□□ 0.15
CHFR-208ENST00000511001 MIS18AQ9NYP9 233 aa15.97■□□□□ 0.15
CHFR-208ENST00000511001 ADCY9O60503 1353 aa15.97■□□□□ 0.15
CHFR-208ENST00000511001 SNRPA1P09661 255 aaKnown RBP15.96■□□□□ 0.15
CHFR-208ENST00000511001 TBC1D2BQ9UPU7 963 aa15.96■□□□□ 0.15
CHFR-208ENST00000511001 SERPINB2P05120 415 aa15.95■□□□□ 0.14
CHFR-208ENST00000511001 PIP4K2AP48426 406 aaPredicted RBP15.95■□□□□ 0.14
CHFR-208ENST00000511001 PNNQ9H307 717 aaKnown RBP15.95■□□□□ 0.14
CHFR-208ENST00000511001 BCS1LQ9Y276 419 aa15.95■□□□□ 0.14
CHFR-208ENST00000511001 MAPK8IP3Q9UPT6 1336 aa15.94■□□□□ 0.14
CHFR-208ENST00000511001 CAMTA2O94983 1202 aa15.94■□□□□ 0.14
CHFR-208ENST00000511001 CHRNA5P30532 468 aa15.94■□□□□ 0.14
CHFR-208ENST00000511001 TBC1D9BQ66K14 1250 aa15.94■□□□□ 0.14
CHFR-208ENST00000511001 GPBP1L1Q9HC44 474 aaPredicted RBP15.94■□□□□ 0.14
CHFR-208ENST00000511001 ZNF330Q9Y3S2 320 aaPredicted RBP15.94■□□□□ 0.14
CHFR-208ENST00000511001 CARMIL3Q8ND23 1372 aa15.94■□□□□ 0.14
CHFR-208ENST00000511001 SBF1O95248 1867 aa15.94■□□□□ 0.14
CHFR-208ENST00000511001 NBPF26B4DH59 902 aa15.93■□□□□ 0.14
CHFR-208ENST00000511001 NBPF10Q6P3W6 841 aaKnown RBP15.93■□□□□ 0.14
CHFR-208ENST00000511001 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
CHFR-208ENST00000511001 NBPF15Q8N660 670 aa15.93■□□□□ 0.14
CHFR-208ENST00000511001 ZNF526Q8TF50 670 aaPredicted RBP15.93■□□□□ 0.14
CHFR-208ENST00000511001 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
CHFR-208ENST00000511001 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
CHFR-208ENST00000511001 PNISRQ8TF01 805 aaKnown RBP15.92■□□□□ 0.14
CHFR-208ENST00000511001 PIM2Q9P1W9 311 aa15.92■□□□□ 0.14
CHFR-208ENST00000511001 NUP98P52948 1817 aa15.91■□□□□ 0.14
CHFR-208ENST00000511001 COL11A2P13942 1736 aaPredicted RBP15.91■□□□□ 0.14
CHFR-208ENST00000511001 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
CHFR-208ENST00000511001 DZIP3Q86Y13 1208 aaKnown RBP15.91■□□□□ 0.14
CHFR-208ENST00000511001 CCDC88AQ3V6T2 1871 aa15.91■□□□□ 0.14
CHFR-208ENST00000511001 HSPA6P17066 643 aa15.9■□□□□ 0.14
CHFR-208ENST00000511001 RIPK4P57078 832 aa15.9■□□□□ 0.14
CHFR-208ENST00000511001 CACNA1SQ13698 1873 aa15.89■□□□□ 0.13
CHFR-208ENST00000511001 DALRD3Q5D0E6 543 aaKnown RBP15.89■□□□□ 0.13
CHFR-208ENST00000511001 ARHGAP27Q6ZUM4 889 aa15.89■□□□□ 0.13
CHFR-208ENST00000511001 CCDC146Q8IYE0 955 aa15.89■□□□□ 0.13
CHFR-208ENST00000511001 PRR5LQ6MZQ0 368 aa15.88■□□□□ 0.13
CHFR-208ENST00000511001 NPM2Q86SE8 214 aaKnown RBP15.88■□□□□ 0.13
CHFR-208ENST00000511001 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
CHFR-208ENST00000511001 ZEB1P37275 1124 aaPredicted RBP15.87■□□□□ 0.13
CHFR-208ENST00000511001 CCDC24Q8N4L8 307 aa15.87■□□□□ 0.13
CHFR-208ENST00000511001 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
CHFR-208ENST00000511001 ARFGEF2Q9Y6D5 1785 aa15.86■□□□□ 0.13
CHFR-208ENST00000511001 CLEC4GQ6UXB4 293 aa15.86■□□□□ 0.13
CHFR-208ENST00000511001 C2CD5Q86YS7 1000 aa15.86■□□□□ 0.13
CHFR-208ENST00000511001 RUNDC1Q96C34 613 aa15.86■□□□□ 0.13
CHFR-208ENST00000511001 SETDB2Q96T68 719 aa15.86■□□□□ 0.13
CHFR-208ENST00000511001 SLX4Q8IY92 1834 aa15.85■□□□□ 0.13
CHFR-208ENST00000511001 LMOD3Q0VAK6 560 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms