RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 ZBTB1Q9Y2K1 713 aa11.63□□□□□ -0.55
PDGFC-206ENST00000510982 N4BP2Q86UW6 1770 aaPredicted RBP11.63□□□□□ -0.55
PDGFC-206ENST00000510982 C4AP0C0L4 1744 aa11.63□□□□□ -0.55
PDGFC-206ENST00000510982 NFIXQ14938 502 aa11.62□□□□□ -0.55
PDGFC-206ENST00000510982 ZNF790Q6PG37 636 aa11.62□□□□□ -0.55
PDGFC-206ENST00000510982 ZNF496Q96IT1 587 aaPredicted RBP11.62□□□□□ -0.55
PDGFC-206ENST00000510982 PHACTR3Q96KR7 559 aa11.62□□□□□ -0.55
PDGFC-206ENST00000510982 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
PDGFC-206ENST00000510982 KIF13BQ9NQT8 1826 aa11.62□□□□□ -0.55
PDGFC-206ENST00000510982 A0A087WZG4 1122 aa11.61□□□□□ -0.55
PDGFC-206ENST00000510982 SERPINB2P05120 415 aa11.61□□□□□ -0.55
PDGFC-206ENST00000510982 PRKAR2BP31323 418 aa11.61□□□□□ -0.55
PDGFC-206ENST00000510982 TJP1Q07157 1748 aa11.6□□□□□ -0.55
PDGFC-206ENST00000510982 COL15A1P39059 1388 aa11.6□□□□□ -0.55
PDGFC-206ENST00000510982 KIF3CO14782 793 aa11.6□□□□□ -0.55
PDGFC-206ENST00000510982 U2AF1L5P0DN76 240 aaPredicted RBP11.6□□□□□ -0.55
PDGFC-206ENST00000510982 U2AF1Q01081 240 aaKnown RBP eCLIP11.6□□□□□ -0.55
PDGFC-206ENST00000510982 C9orf131Q5VYM1 1079 aa11.6□□□□□ -0.55
PDGFC-206ENST00000510982 BICDL1Q6ZP65 573 aa11.6□□□□□ -0.55
PDGFC-206ENST00000510982 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
PDGFC-206ENST00000510982 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
PDGFC-206ENST00000510982 ZNF330Q9Y3S2 320 aaPredicted RBP11.6□□□□□ -0.55
PDGFC-206ENST00000510982 MRC1P22897 1456 aa11.59□□□□□ -0.55
PDGFC-206ENST00000510982 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
PDGFC-206ENST00000510982 HSPA6P17066 643 aa11.59□□□□□ -0.55
PDGFC-206ENST00000510982 PPP2R1AP30153 589 aa11.59□□□□□ -0.55
PDGFC-206ENST00000510982 EIF5P55010 431 aaKnown RBP11.59□□□□□ -0.55
PDGFC-206ENST00000510982 FMNL2Q96PY5 1086 aa11.59□□□□□ -0.55
PDGFC-206ENST00000510982 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
PDGFC-206ENST00000510982 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
PDGFC-206ENST00000510982 KCPQ6ZWJ8 1503 aa11.59□□□□□ -0.55
PDGFC-206ENST00000510982 COL3A1P02461 1466 aaPredicted RBP11.58□□□□□ -0.56
PDGFC-206ENST00000510982 HEG1Q9ULI3 1381 aa11.58□□□□□ -0.56
PDGFC-206ENST00000510982 KCNQ3O43525 872 aa11.58□□□□□ -0.56
PDGFC-206ENST00000510982 A1BGP04217 495 aa11.58□□□□□ -0.56
PDGFC-206ENST00000510982 RTF1Q92541 710 aaKnown RBP11.58□□□□□ -0.56
PDGFC-206ENST00000510982 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
PDGFC-206ENST00000510982 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
PDGFC-206ENST00000510982 H0YIN7 160 aa11.57□□□□□ -0.56
PDGFC-206ENST00000510982 TOMM70O94826 608 aa11.57□□□□□ -0.56
PDGFC-206ENST00000510982 IL6STP40189 918 aaPredicted RBP11.57□□□□□ -0.56
PDGFC-206ENST00000510982 C2CD5Q86YS7 1000 aa11.57□□□□□ -0.56
PDGFC-206ENST00000510982 NMRK2Q9NPI5 230 aa11.57□□□□□ -0.56
PDGFC-206ENST00000510982 RNF181Q9P0P0 153 aa11.57□□□□□ -0.56
PDGFC-206ENST00000510982 TBC1D9BQ66K14 1250 aa11.56□□□□□ -0.56
PDGFC-206ENST00000510982 MCM10Q7L590 875 aa11.56□□□□□ -0.56
PDGFC-206ENST00000510982 TTLL6Q8N841 843 aa11.56□□□□□ -0.56
PDGFC-206ENST00000510982 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
PDGFC-206ENST00000510982 ADAMTS7Q9UKP4 1686 aa11.55□□□□□ -0.56
PDGFC-206ENST00000510982 CEMIPQ8WUJ3 1361 aa11.55□□□□□ -0.56
PDGFC-206ENST00000510982 NPHP1O15259 732 aa11.54□□□□□ -0.56
PDGFC-206ENST00000510982 SNRPA1P09661 255 aaKnown RBP11.54□□□□□ -0.56
PDGFC-206ENST00000510982 DCTN1Q14203 1278 aa11.54□□□□□ -0.56
PDGFC-206ENST00000510982 C16orf71Q8IYS4 520 aaPredicted RBP11.54□□□□□ -0.56
PDGFC-206ENST00000510982 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
PDGFC-206ENST00000510982 ZNF622Q969S3 477 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDGFC-206ENST00000510982 SETDB2Q96T68 719 aa11.54□□□□□ -0.56
PDGFC-206ENST00000510982 RRAGCQ9HB90 399 aa11.54□□□□□ -0.56
PDGFC-206ENST00000510982 BRCA1P38398 1863 aaKnown RBP11.54□□□□□ -0.56
PDGFC-206ENST00000510982 KDM2BQ8NHM5 1336 aa11.54□□□□□ -0.56
PDGFC-206ENST00000510982 HTATSF1O43719 755 aaKnown RBP11.53□□□□□ -0.56
PDGFC-206ENST00000510982 NEFMP07197 916 aa11.53□□□□□ -0.56
PDGFC-206ENST00000510982 PDE6BP35913 854 aa11.53□□□□□ -0.56
PDGFC-206ENST00000510982 PIP4K2AP48426 406 aaPredicted RBP11.53□□□□□ -0.56
PDGFC-206ENST00000510982 DZIP3Q86Y13 1208 aaKnown RBP11.53□□□□□ -0.56
PDGFC-206ENST00000510982 BRIP1Q9BX63 1249 aa11.53□□□□□ -0.56
PDGFC-206ENST00000510982 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
PDGFC-206ENST00000510982 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
PDGFC-206ENST00000510982 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
PDGFC-206ENST00000510982 AFDNP55196 1824 aaKnown RBP11.52□□□□□ -0.57
PDGFC-206ENST00000510982 PRAMEF22A3QJZ6 481 aa11.52□□□□□ -0.57
PDGFC-206ENST00000510982 CAMTA2O94983 1202 aa11.52□□□□□ -0.57
PDGFC-206ENST00000510982 LMNB1P20700 586 aa11.52□□□□□ -0.57
PDGFC-206ENST00000510982 APLP1P51693 650 aa11.52□□□□□ -0.57
PDGFC-206ENST00000510982 RASSF7Q02833 373 aa11.52□□□□□ -0.57
PDGFC-206ENST00000510982 TAF7Q15545 349 aaPredicted RBP11.52□□□□□ -0.57
PDGFC-206ENST00000510982 PRR5LQ6MZQ0 368 aa11.52□□□□□ -0.57
PDGFC-206ENST00000510982 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
PDGFC-206ENST00000510982 MIS18AQ9NYP9 233 aa11.51□□□□□ -0.57
PDGFC-206ENST00000510982 ZNF219Q9P2Y4 722 aaPredicted RBP11.51□□□□□ -0.57
PDGFC-206ENST00000510982 CARMIL3Q8ND23 1372 aa11.51□□□□□ -0.57
PDGFC-206ENST00000510982 C21orf2O43822 256 aa11.5□□□□□ -0.57
PDGFC-206ENST00000510982 ST5P78524 1137 aa11.5□□□□□ -0.57
PDGFC-206ENST00000510982 CLEC4GQ6UXB4 293 aa11.5□□□□□ -0.57
PDGFC-206ENST00000510982 CNBD1Q8NA66 436 aa11.5□□□□□ -0.57
PDGFC-206ENST00000510982 SBF1O95248 1867 aa11.49□□□□□ -0.57
PDGFC-206ENST00000510982 PRELPP51888 382 aa11.49□□□□□ -0.57
PDGFC-206ENST00000510982 NBPF5PQ86XG9 351 aaPredicted RBP11.49□□□□□ -0.57
PDGFC-206ENST00000510982 CNKSR1Q969H4 720 aa11.49□□□□□ -0.57
PDGFC-206ENST00000510982 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
PDGFC-206ENST00000510982 NRXN2Q9P2S2 1712 aa11.49□□□□□ -0.57
PDGFC-206ENST00000510982 SIPA1L3O60292 1781 aaPredicted RBP11.49□□□□□ -0.57
PDGFC-206ENST00000510982 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
PDGFC-206ENST00000510982 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
PDGFC-206ENST00000510982 NFKBIEO00221 500 aa11.48□□□□□ -0.57
PDGFC-206ENST00000510982 FSTL1Q12841 308 aa11.48□□□□□ -0.57
PDGFC-206ENST00000510982 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
PDGFC-206ENST00000510982 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
PDGFC-206ENST00000510982 TPTE2Q6XPS3 522 aa11.48□□□□□ -0.57
PDGFC-206ENST00000510982 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms