RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.65□□□□□ -0.06
USP53-206ENST00000510737 NFATC2IPQ8NCF5 419 aa14.65□□□□□ -0.06
USP53-206ENST00000510737 C1orf216Q8TAB5 229 aa14.65□□□□□ -0.06
USP53-206ENST00000510737 PARP3Q9Y6F1 533 aa14.65□□□□□ -0.06
USP53-206ENST00000510737 HOXB4P17483 251 aaPredicted RBP14.64□□□□□ -0.07
USP53-206ENST00000510737 EDARADDQ8WWZ3 215 aa14.64□□□□□ -0.07
USP53-206ENST00000510737 ZNF358Q9NW07 568 aa14.64□□□□□ -0.07
USP53-206ENST00000510737 NOD1Q9Y239 953 aa14.64□□□□□ -0.07
USP53-206ENST00000510737 PCDHGC4Q9Y5F7 938 aa14.64□□□□□ -0.07
USP53-206ENST00000510737 A0A1W2PNR3 127 aa14.63□□□□□ -0.07
USP53-206ENST00000510737 USP17L5A8MUK1 530 aa14.63□□□□□ -0.07
USP53-206ENST00000510737 NLRP8Q86W28 1048 aa14.63□□□□□ -0.07
USP53-206ENST00000510737 ZDHHC1Q8WTX9 485 aa14.63□□□□□ -0.07
USP53-206ENST00000510737 GGA1Q9UJY5 639 aa14.63□□□□□ -0.07
USP53-206ENST00000510737 GDF2Q9UK05 429 aaPredicted RBP14.63□□□□□ -0.07
USP53-206ENST00000510737 PLA2G4EQ3MJ16 856 aa14.62□□□□□ -0.07
USP53-206ENST00000510737 PODNQ7Z5L7 613 aa14.62□□□□□ -0.07
USP53-206ENST00000510737 ZIC5Q96T25 663 aa14.62□□□□□ -0.07
USP53-206ENST00000510737 EPHA4P54764 986 aa14.61□□□□□ -0.07
USP53-206ENST00000510737 UCN2Q96RP3 112 aa14.61□□□□□ -0.07
USP53-206ENST00000510737 CABP1Q9NZU7 370 aa14.61□□□□□ -0.07
USP53-206ENST00000510737 SCHIP1Q9P0W5 487 aaPredicted RBP14.61□□□□□ -0.07
USP53-206ENST00000510737 DCDC2BA2VCK2 349 aa14.6□□□□□ -0.07
USP53-206ENST00000510737 ATXN7O15265 892 aaPredicted RBP14.6□□□□□ -0.07
USP53-206ENST00000510737 TXLNAP40222 546 aa14.6□□□□□ -0.07
USP53-206ENST00000510737 TNP2Q05952 138 aa14.6□□□□□ -0.07
USP53-206ENST00000510737 FIGNL1Q6PIW4 674 aa14.6□□□□□ -0.07
USP53-206ENST00000510737 GOLGA6L1Q8N7Z2 621 aa14.6□□□□□ -0.07
USP53-206ENST00000510737 KIAA1024Q9UPX6 916 aa14.6□□□□□ -0.07
USP53-206ENST00000510737 LZTS3O60299 673 aaPredicted RBP14.59□□□□□ -0.07
USP53-206ENST00000510737 FOXK2Q01167 660 aa14.59□□□□□ -0.07
USP53-206ENST00000510737 ARSJQ5FYB0 599 aaPredicted RBP14.59□□□□□ -0.07
USP53-206ENST00000510737 SLCO4C1Q6ZQN7 724 aa14.59□□□□□ -0.07
USP53-206ENST00000510737 ZDHHC3Q9NYG2 299 aa14.59□□□□□ -0.07
USP53-206ENST00000510737 KLF15Q9UIH9 416 aa14.59□□□□□ -0.07
USP53-206ENST00000510737 ABCC9O60706 1549 aa14.58□□□□□ -0.08
USP53-206ENST00000510737 IGHA1P01876 353 aa14.58□□□□□ -0.08
USP53-206ENST00000510737 MAPTP10636 758 aaKnown RBP14.58□□□□□ -0.08
USP53-206ENST00000510737 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.08
USP53-206ENST00000510737 NBPF1Q3BBV0 1214 aa14.58□□□□□ -0.08
USP53-206ENST00000510737 ZBTB7BO15156 539 aaPredicted RBP14.57□□□□□ -0.08
USP53-206ENST00000510737 RAD21O60216 631 aa14.57□□□□□ -0.08
USP53-206ENST00000510737 CD33P20138 364 aa14.57□□□□□ -0.08
USP53-206ENST00000510737 PSME1Q06323 249 aa14.57□□□□□ -0.08
USP53-206ENST00000510737 TBCELQ5QJ74 424 aa14.57□□□□□ -0.08
USP53-206ENST00000510737 BACH1O14867 736 aa14.55□□□□□ -0.08
USP53-206ENST00000510737 ARAFP10398 606 aa14.55□□□□□ -0.08
USP53-206ENST00000510737 COL8A1P27658 744 aa14.55□□□□□ -0.08
USP53-206ENST00000510737 CLDN10P78369 228 aa14.55□□□□□ -0.08
USP53-206ENST00000510737 FLIIQ13045 1269 aa14.55□□□□□ -0.08
USP53-206ENST00000510737 LINC00114Q6XXX2 140 aa14.55□□□□□ -0.08
USP53-206ENST00000510737 WWC1Q8IX03 1113 aa14.55□□□□□ -0.08
USP53-206ENST00000510737 TNS4Q8IZW8 715 aa14.55□□□□□ -0.08
USP53-206ENST00000510737 NEURL1BA8MQ27 555 aa14.54□□□□□ -0.08
USP53-206ENST00000510737 EPXP11678 715 aa14.54□□□□□ -0.08
USP53-206ENST00000510737 TATP17735 454 aaPredicted RBP14.54□□□□□ -0.08
USP53-206ENST00000510737 SH3PXD2AQ5TCZ1 1133 aa14.54□□□□□ -0.08
USP53-206ENST00000510737 HDGFL1Q5TGJ6 251 aa14.54□□□□□ -0.08
USP53-206ENST00000510737 STRN4Q9NRL3 753 aa14.54□□□□□ -0.08
USP53-206ENST00000510737 KHNYNO15037 678 aaKnown RBP14.53□□□□□ -0.08
USP53-206ENST00000510737 C7orf43Q8WVR3 580 aa14.53□□□□□ -0.08
USP53-206ENST00000510737 L3MBTL2Q969R5 705 aa14.53□□□□□ -0.08
USP53-206ENST00000510737 RRAGCQ9HB90 399 aa14.53□□□□□ -0.08
USP53-206ENST00000510737 USP17L3A6NCW0 530 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 USP17L4A6NCW7 530 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 TEAD4Q15561 434 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 USP17L2Q6R6M4 530 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 USP17L1Q7RTZ2 530 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 SLC9A9Q8IVB4 645 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 PLEKHM2Q8IWE5 1019 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 BTBD6Q96KE9 485 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 SPOCK3Q9BQ16 436 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 SUV39H2Q9H5I1 410 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 MKL2Q9ULH7 1088 aa14.52□□□□□ -0.09
USP53-206ENST00000510737 KRBA1A5PL33 1030 aa14.51□□□□□ -0.09
USP53-206ENST00000510737 PROCP04070 461 aa14.51□□□□□ -0.09
USP53-206ENST00000510737 NOS2P35228 1153 aa14.51□□□□□ -0.09
USP53-206ENST00000510737 FAM182BQ5T319 152 aa14.51□□□□□ -0.09
USP53-206ENST00000510737 FAM157BP0CG42 384 aa14.5□□□□□ -0.09
USP53-206ENST00000510737 FCHSD1Q86WN1 690 aa14.5□□□□□ -0.09
USP53-206ENST00000510737 TPCN2Q8NHX9 752 aa14.5□□□□□ -0.09
USP53-206ENST00000510737 EML1O00423 815 aa14.49□□□□□ -0.09
USP53-206ENST00000510737 EFSO43281 561 aa14.49□□□□□ -0.09
USP53-206ENST00000510737 AMPD1P23109 780 aa14.48□□□□□ -0.09
USP53-206ENST00000510737 GRIN2CQ14957 1233 aa14.48□□□□□ -0.09
USP53-206ENST00000510737 SAMD5Q5TGI4 173 aa14.48□□□□□ -0.09
USP53-206ENST00000510737 BICDL1Q6ZP65 573 aa14.48□□□□□ -0.09
USP53-206ENST00000510737 CLUAP1Q96AJ1 413 aa14.48□□□□□ -0.09
USP53-206ENST00000510737 MSTNO14793 375 aa14.47□□□□□ -0.09
USP53-206ENST00000510737 ATP9BO43861 1147 aa14.47□□□□□ -0.09
USP53-206ENST00000510737 DKK1O94907 266 aa14.46□□□□□ -0.09
USP53-206ENST00000510737 DGKGP49619 791 aa14.46□□□□□ -0.09
USP53-206ENST00000510737 CCDC102BQ68D86 513 aa14.46□□□□□ -0.09
USP53-206ENST00000510737 TRIM50Q86XT4 487 aa14.46□□□□□ -0.09
USP53-206ENST00000510737 PCBP4P57723 403 aaKnown RBP14.45□□□□□ -0.1
USP53-206ENST00000510737 LRRC69Q6ZNQ3 347 aa14.45□□□□□ -0.1
USP53-206ENST00000510737 FNBP4Q8N3X1 1017 aaPredicted RBP14.45□□□□□ -0.1
USP53-206ENST00000510737 TSPAN10Q9H1Z9 355 aaPredicted RBP14.45□□□□□ -0.1
USP53-206ENST00000510737 GJA3Q9Y6H8 435 aa14.45□□□□□ -0.1
USP53-206ENST00000510737 ADH6P28332 368 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms