RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
SNF8-207ENST00000509995 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
SNF8-207ENST00000509995 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
SNF8-207ENST00000509995 FLT4P35916 1363 aa15.35■□□□□ 0.05
SNF8-207ENST00000509995 IQCA1LA6NCM1 817 aa15.34■□□□□ 0.05
SNF8-207ENST00000509995 DDNO94850 711 aaPredicted RBP15.34■□□□□ 0.05
SNF8-207ENST00000509995 MCOLN1Q9GZU1 580 aa15.34■□□□□ 0.05
SNF8-207ENST00000509995 CASP8AP2Q9UKL3 1982 aa15.34■□□□□ 0.05
SNF8-207ENST00000509995 TM4SF1P30408 202 aa15.33■□□□□ 0.04
SNF8-207ENST00000509995 BEGAINQ9BUH8 593 aa15.33■□□□□ 0.04
SNF8-207ENST00000509995 PRPF38BQ5VTL8 546 aaKnown RBP15.32■□□□□ 0.04
SNF8-207ENST00000509995 TAF1DQ9H5J8 278 aaPredicted RBP15.32■□□□□ 0.04
SNF8-207ENST00000509995 KIF24Q5T7B8 1368 aa15.32■□□□□ 0.04
SNF8-207ENST00000509995 TJP1Q07157 1748 aa15.31■□□□□ 0.04
SNF8-207ENST00000509995 PHKG2P15735 406 aa15.31■□□□□ 0.04
SNF8-207ENST00000509995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNF8-207ENST00000509995 CRKLP46109 303 aaKnown RBP15.3■□□□□ 0.04
SNF8-207ENST00000509995 IFNL2Q8IZJ0 200 aa15.3■□□□□ 0.04
SNF8-207ENST00000509995 L3MBTL3Q96JM7 780 aaPredicted RBP15.3■□□□□ 0.04
SNF8-207ENST00000509995 ABT1Q9ULW3 272 aaKnown RBP15.3■□□□□ 0.04
SNF8-207ENST00000509995 TONSLQ96HA7 1378 aa15.29■□□□□ 0.04
SNF8-207ENST00000509995 LTBP3Q9NS15 1303 aa15.29■□□□□ 0.04
SNF8-207ENST00000509995 C2CD5Q86YS7 1000 aa15.29■□□□□ 0.04
SNF8-207ENST00000509995 L3MBTL2Q969R5 705 aa15.29■□□□□ 0.04
SNF8-207ENST00000509995 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
SNF8-207ENST00000509995 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
SNF8-207ENST00000509995 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
SNF8-207ENST00000509995 ANKRD31Q8N7Z5 1873 aa15.28■□□□□ 0.04
SNF8-207ENST00000509995 CACNA1SQ13698 1873 aa15.27■□□□□ 0.04
SNF8-207ENST00000509995 CARMIL3Q8ND23 1372 aa15.27■□□□□ 0.04
SNF8-207ENST00000509995 KIF20BQ96Q89 1820 aa15.27■□□□□ 0.04
SNF8-207ENST00000509995 H0YIN7 160 aa15.27■□□□□ 0.04
SNF8-207ENST00000509995 CAPNS2Q96L46 248 aa15.27■□□□□ 0.04
SNF8-207ENST00000509995 PUS7Q96PZ0 661 aaKnown RBP15.27■□□□□ 0.04
SNF8-207ENST00000509995 TAOK3Q9H2K8 898 aa15.27■□□□□ 0.04
SNF8-207ENST00000509995 ANKRD26Q9UPS8 1709 aa15.26■□□□□ 0.03
SNF8-207ENST00000509995 ECE1P42892 770 aa15.26■□□□□ 0.03
SNF8-207ENST00000509995 NFIXQ14938 502 aa15.26■□□□□ 0.03
SNF8-207ENST00000509995 USPL1Q5W0Q7 1092 aa15.26■□□□□ 0.03
SNF8-207ENST00000509995 GPR101Q96P66 508 aaPredicted RBP15.26■□□□□ 0.03
SNF8-207ENST00000509995 ERVV-2B6SEH9 535 aa15.25■□□□□ 0.03
SNF8-207ENST00000509995 C21orf2O43822 256 aa15.25■□□□□ 0.03
SNF8-207ENST00000509995 ZPR1O75312 459 aa15.25■□□□□ 0.03
SNF8-207ENST00000509995 DGKZQ13574 1117 aa15.25■□□□□ 0.03
SNF8-207ENST00000509995 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
SNF8-207ENST00000509995 GGNBP2Q9H3C7 697 aa15.25■□□□□ 0.03
SNF8-207ENST00000509995 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
SNF8-207ENST00000509995 TRPM7Q96QT4 1865 aa15.25■□□□□ 0.03
SNF8-207ENST00000509995 MAP1SQ66K74 1059 aaPredicted RBP15.24■□□□□ 0.03
SNF8-207ENST00000509995 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
SNF8-207ENST00000509995 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
SNF8-207ENST00000509995 ARFGEF2Q9Y6D5 1785 aa15.24■□□□□ 0.03
SNF8-207ENST00000509995 FYB1O15117 783 aa15.23■□□□□ 0.03
SNF8-207ENST00000509995 CA12O43570 354 aa15.23■□□□□ 0.03
SNF8-207ENST00000509995 SERPINB2P05120 415 aa15.23■□□□□ 0.03
SNF8-207ENST00000509995 GRM1Q13255 1194 aa15.23■□□□□ 0.03
SNF8-207ENST00000509995 CYP4F22Q6NT55 531 aa15.23■□□□□ 0.03
SNF8-207ENST00000509995 HACL1Q9UJ83 578 aa15.23■□□□□ 0.03
SNF8-207ENST00000509995 SLX4Q8IY92 1834 aa15.22■□□□□ 0.03
SNF8-207ENST00000509995 PTCD1O75127 700 aaKnown RBP15.22■□□□□ 0.03
SNF8-207ENST00000509995 EPHX2P34913 555 aa15.22■□□□□ 0.03
SNF8-207ENST00000509995 SOX10P56693 466 aa15.22■□□□□ 0.03
SNF8-207ENST00000509995 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
SNF8-207ENST00000509995 DDX21Q9NR30 783 aaKnown RBP eCLIP15.22■□□□□ 0.03
SNF8-207ENST00000509995 PNMA8AQ86V59 439 aaPredicted RBP15.21■□□□□ 0.03
SNF8-207ENST00000509995 ZNF622Q969S3 477 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNF8-207ENST00000509995 EMILIN1Q9Y6C2 1016 aa15.21■□□□□ 0.03
SNF8-207ENST00000509995 SOS1Q07889 1333 aaPredicted RBP15.2■□□□□ 0.02
SNF8-207ENST00000509995 MAP2K2P36507 400 aa15.2■□□□□ 0.02
SNF8-207ENST00000509995 ZNF541Q9H0D2 1346 aa15.19■□□□□ 0.02
SNF8-207ENST00000509995 EYA1Q99502 592 aa15.19■□□□□ 0.02
SNF8-207ENST00000509995 NARFQ9UHQ1 456 aa15.19■□□□□ 0.02
SNF8-207ENST00000509995 AOC2O75106 756 aa15.18■□□□□ 0.02
SNF8-207ENST00000509995 HSP90AB1P08238 724 aaKnown RBP15.18■□□□□ 0.02
SNF8-207ENST00000509995 CABP4P57796 275 aa15.18■□□□□ 0.02
SNF8-207ENST00000509995 BCL2L12Q9HB09 334 aa15.18■□□□□ 0.02
SNF8-207ENST00000509995 PDZRN3Q9UPQ7 1066 aa15.18■□□□□ 0.02
SNF8-207ENST00000509995 COL15A1P39059 1388 aa15.18■□□□□ 0.02
SNF8-207ENST00000509995 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
SNF8-207ENST00000509995 CARD11Q9BXL7 1154 aa15.17■□□□□ 0.02
SNF8-207ENST00000509995 PDE6BP35913 854 aa15.16■□□□□ 0.02
SNF8-207ENST00000509995 SOGA3Q5TF21 947 aa15.16■□□□□ 0.02
SNF8-207ENST00000509995 TLL2Q9Y6L7 1015 aa15.16■□□□□ 0.02
SNF8-207ENST00000509995 BRPF1P55201 1214 aaPredicted RBP15.15■□□□□ 0.02
SNF8-207ENST00000509995 FMR1Q06787 632 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNF8-207ENST00000509995 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
SNF8-207ENST00000509995 MKI67P46013 3256 aaKnown RBP15.14■□□□□ 0.01
SNF8-207ENST00000509995 PPM1GO15355 546 aaPredicted RBP15.14■□□□□ 0.01
SNF8-207ENST00000509995 PRPF40BQ6NWY9 871 aaKnown RBP15.14■□□□□ 0.01
SNF8-207ENST00000509995 BRIP1Q9BX63 1249 aa15.14■□□□□ 0.01
SNF8-207ENST00000509995 WASHC2AQ641Q2 1341 aa15.14■□□□□ 0.01
SNF8-207ENST00000509995 SCN7AQ01118 1682 aa15.13■□□□□ 0.01
SNF8-207ENST00000509995 CST9Q5W186 159 aa15.13■□□□□ 0.01
SNF8-207ENST00000509995 DNAJC10Q8IXB1 793 aa15.13■□□□□ 0.01
SNF8-207ENST00000509995 CNKSR1Q969H4 720 aa15.13■□□□□ 0.01
SNF8-207ENST00000509995 BCORQ6W2J9 1755 aa15.12■□□□□ 0.01
SNF8-207ENST00000509995 SCN11AQ9UI33 1791 aa15.11■□□□□ 0.01
SNF8-207ENST00000509995 STYK1Q6J9G0 422 aa15.11■□□□□ 0.01
SNF8-207ENST00000509995 PRR5LQ6MZQ0 368 aa15.11■□□□□ 0.01
SNF8-207ENST00000509995 BICDL1Q6ZP65 573 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms