RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.37
SPOCK1-207ENST00000509978 NR3C2P08235 984 aa12.76□□□□□ -0.37
SPOCK1-207ENST00000509978 TEAD4Q15561 434 aa12.76□□□□□ -0.37
SPOCK1-207ENST00000509978 TBCELQ5QJ74 424 aa12.76□□□□□ -0.37
SPOCK1-207ENST00000509978 LIAT1Q6ZQX7 453 aa12.76□□□□□ -0.37
SPOCK1-207ENST00000509978 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
SPOCK1-207ENST00000509978 ALKBH8Q96BT7 664 aaKnown RBP12.76□□□□□ -0.37
SPOCK1-207ENST00000509978 ARHGEF10LQ9HCE6 1279 aa12.76□□□□□ -0.37
SPOCK1-207ENST00000509978 CCDC87Q9NVE4 849 aa12.76□□□□□ -0.37
SPOCK1-207ENST00000509978 BRD2P25440 801 aaKnown RBP12.75□□□□□ -0.37
SPOCK1-207ENST00000509978 ITGAEP38570 1179 aa12.75□□□□□ -0.37
SPOCK1-207ENST00000509978 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
SPOCK1-207ENST00000509978 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
SPOCK1-207ENST00000509978 LRFN2Q9ULH4 789 aa12.75□□□□□ -0.37
SPOCK1-207ENST00000509978 RAB6BQ9NRW1 208 aa12.74□□□□□ -0.37
SPOCK1-207ENST00000509978 SERTM1A2A2V5 107 aa12.73□□□□□ -0.37
SPOCK1-207ENST00000509978 EML1O00423 815 aa12.73□□□□□ -0.37
SPOCK1-207ENST00000509978 ADH1AP07327 375 aa12.73□□□□□ -0.37
SPOCK1-207ENST00000509978 EHHADHQ08426 723 aa12.73□□□□□ -0.37
SPOCK1-207ENST00000509978 CLN3Q13286 438 aa12.73□□□□□ -0.37
SPOCK1-207ENST00000509978 AAMPQ13685 434 aa12.73□□□□□ -0.37
SPOCK1-207ENST00000509978 TLR1Q15399 786 aa12.73□□□□□ -0.37
SPOCK1-207ENST00000509978 TMC1Q8TDI8 760 aa12.73□□□□□ -0.37
SPOCK1-207ENST00000509978 BACH2Q9BYV9 841 aa12.73□□□□□ -0.37
SPOCK1-207ENST00000509978 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
SPOCK1-207ENST00000509978 TSNAXIP1Q2TAA8 658 aa12.72□□□□□ -0.37
SPOCK1-207ENST00000509978 MRGPRX2Q96LB1 330 aa12.72□□□□□ -0.37
SPOCK1-207ENST00000509978 ZC3H6P61129 1189 aaKnown RBP12.71□□□□□ -0.37
SPOCK1-207ENST00000509978 ZNF295-AS1Q8N0V1 137 aa12.71□□□□□ -0.37
SPOCK1-207ENST00000509978 KDF1Q8NAX2 398 aaPredicted RBP12.71□□□□□ -0.37
SPOCK1-207ENST00000509978 EMID1Q96A84 441 aaPredicted RBP12.71□□□□□ -0.37
SPOCK1-207ENST00000509978 USP3Q9Y6I4 520 aa12.71□□□□□ -0.37
SPOCK1-207ENST00000509978 SCAMP3O14828 347 aaKnown RBP12.7□□□□□ -0.38
SPOCK1-207ENST00000509978 ZBTB39O15060 712 aa12.7□□□□□ -0.38
SPOCK1-207ENST00000509978 LDHBP07195 334 aaKnown RBP12.7□□□□□ -0.38
SPOCK1-207ENST00000509978 NOS2P35228 1153 aa12.7□□□□□ -0.38
SPOCK1-207ENST00000509978 USP5P45974 858 aa12.7□□□□□ -0.38
SPOCK1-207ENST00000509978 RTN1Q16799 776 aa12.7□□□□□ -0.38
SPOCK1-207ENST00000509978 C11orf91Q3C1V1 193 aa12.7□□□□□ -0.38
SPOCK1-207ENST00000509978 FHDC1Q9C0D6 1143 aaPredicted RBP12.7□□□□□ -0.38
SPOCK1-207ENST00000509978 GJD3Q8N144 294 aa12.69□□□□□ -0.38
SPOCK1-207ENST00000509978 GPR182O15218 404 aa12.68□□□□□ -0.38
SPOCK1-207ENST00000509978 MZF1P28698 734 aaPredicted RBP12.68□□□□□ -0.38
SPOCK1-207ENST00000509978 CENPCQ03188 943 aa12.68□□□□□ -0.38
SPOCK1-207ENST00000509978 LDLRAD1Q5T700 205 aa12.68□□□□□ -0.38
SPOCK1-207ENST00000509978 Q6ZVU0 165 aa12.68□□□□□ -0.38
SPOCK1-207ENST00000509978 TMC4Q7Z404 712 aa12.68□□□□□ -0.38
SPOCK1-207ENST00000509978 ALDH16A1Q8IZ83 802 aa12.68□□□□□ -0.38
SPOCK1-207ENST00000509978 ZDHHC1Q8WTX9 485 aa12.68□□□□□ -0.38
SPOCK1-207ENST00000509978 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
SPOCK1-207ENST00000509978 FAM26DQ5JW98 314 aa12.67□□□□□ -0.38
SPOCK1-207ENST00000509978 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
SPOCK1-207ENST00000509978 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
SPOCK1-207ENST00000509978 PTGIRP43119 386 aa12.66□□□□□ -0.38
SPOCK1-207ENST00000509978 MAPK8P45983 427 aa12.66□□□□□ -0.38
SPOCK1-207ENST00000509978 C1orf53Q5VUE5 145 aa12.66□□□□□ -0.38
SPOCK1-207ENST00000509978 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
SPOCK1-207ENST00000509978 SLC19A1P41440 591 aa12.65□□□□□ -0.38
SPOCK1-207ENST00000509978 DAB2P98082 770 aa12.65□□□□□ -0.38
SPOCK1-207ENST00000509978 ATP2B2Q01814 1243 aa12.65□□□□□ -0.38
SPOCK1-207ENST00000509978 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
SPOCK1-207ENST00000509978 DRC1Q96MC2 740 aa12.65□□□□□ -0.38
SPOCK1-207ENST00000509978 NNTQ13423 1086 aa12.64□□□□□ -0.39
SPOCK1-207ENST00000509978 ENOX2Q16206 610 aaKnown RBP12.64□□□□□ -0.39
SPOCK1-207ENST00000509978 ETFBKMTQ8IXQ9 262 aa12.64□□□□□ -0.39
SPOCK1-207ENST00000509978 DUSP9Q99956 384 aaKnown RBP12.64□□□□□ -0.39
SPOCK1-207ENST00000509978 CABP1Q9NZU7 370 aa12.64□□□□□ -0.39
SPOCK1-207ENST00000509978 POLIQ9UNA4 740 aa12.64□□□□□ -0.39
SPOCK1-207ENST00000509978 ZNF232Q9UNY5 417 aa12.64□□□□□ -0.39
SPOCK1-207ENST00000509978 SH3PXD2AQ5TCZ1 1133 aa12.63□□□□□ -0.39
SPOCK1-207ENST00000509978 ALG1LQ6GMV1 187 aa12.63□□□□□ -0.39
SPOCK1-207ENST00000509978 ATCAYQ86WG3 371 aa12.63□□□□□ -0.39
SPOCK1-207ENST00000509978 NGLY1Q96IV0 654 aa12.63□□□□□ -0.39
SPOCK1-207ENST00000509978 KLF16Q9BXK1 252 aaPredicted RBP12.63□□□□□ -0.39
SPOCK1-207ENST00000509978 HCN4Q9Y3Q4 1203 aa12.63□□□□□ -0.39
SPOCK1-207ENST00000509978 DGKZQ13574 1117 aa12.62□□□□□ -0.39
SPOCK1-207ENST00000509978 IFT43Q96FT9 208 aa12.62□□□□□ -0.39
SPOCK1-207ENST00000509978 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
SPOCK1-207ENST00000509978 NIFKQ9BYG3 293 aaKnown RBP12.62□□□□□ -0.39
SPOCK1-207ENST00000509978 NIF3L1Q9GZT8 377 aa12.62□□□□□ -0.39
SPOCK1-207ENST00000509978 SORBS3O60504 671 aa12.61□□□□□ -0.39
SPOCK1-207ENST00000509978 ALDH1A1P00352 501 aa12.61□□□□□ -0.39
SPOCK1-207ENST00000509978 PDGFAP04085 211 aa12.61□□□□□ -0.39
SPOCK1-207ENST00000509978 ZAP70P43403 619 aa12.61□□□□□ -0.39
SPOCK1-207ENST00000509978 HDLBPQ00341 1268 aaKnown RBP12.61□□□□□ -0.39
SPOCK1-207ENST00000509978 CBLBQ13191 982 aa12.61□□□□□ -0.39
SPOCK1-207ENST00000509978 SPRYD7Q5W111 196 aa12.61□□□□□ -0.39
SPOCK1-207ENST00000509978 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
SPOCK1-207ENST00000509978 METTL5Q9NRN9 209 aaKnown RBP12.61□□□□□ -0.39
SPOCK1-207ENST00000509978 ERCC5P28715 1186 aaPredicted RBP12.6□□□□□ -0.39
SPOCK1-207ENST00000509978 IFFO2Q5TF58 517 aa12.6□□□□□ -0.39
SPOCK1-207ENST00000509978 EDEM1Q92611 657 aa12.6□□□□□ -0.39
SPOCK1-207ENST00000509978 ZSCAN10Q96SZ4 725 aaPredicted RBP12.6□□□□□ -0.39
SPOCK1-207ENST00000509978 PHACTR1Q9C0D0 580 aa12.6□□□□□ -0.39
SPOCK1-207ENST00000509978 WASF2Q9Y6W5 498 aa12.6□□□□□ -0.39
SPOCK1-207ENST00000509978 DNM1Q05193 864 aaKnown RBP12.59□□□□□ -0.39
SPOCK1-207ENST00000509978 NAALADL2Q58DX5 795 aa12.59□□□□□ -0.39
SPOCK1-207ENST00000509978 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
SPOCK1-207ENST00000509978 FBF1Q8TES7 1133 aa12.59□□□□□ -0.39
SPOCK1-207ENST00000509978 RNF166Q96A37 237 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms