RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 SLC4A9Q96Q91 983 aa17.78■□□□□ 0.44
CYSTM1-204ENST00000509789 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
CYSTM1-204ENST00000509789 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
CYSTM1-204ENST00000509789 USP16Q9Y5T5 823 aa17.78■□□□□ 0.44
CYSTM1-204ENST00000509789 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
CYSTM1-204ENST00000509789 SMC4Q9NTJ3 1288 aa17.77■□□□□ 0.44
CYSTM1-204ENST00000509789 CCNL1Q9UK58 526 aaPredicted RBP17.77■□□□□ 0.44
CYSTM1-204ENST00000509789 UBR2Q8IWV8 1755 aa17.76■□□□□ 0.43
CYSTM1-204ENST00000509789 PLSCR1O15162 318 aa17.76■□□□□ 0.43
CYSTM1-204ENST00000509789 TCERG1O14776 1098 aaKnown RBP17.75■□□□□ 0.43
CYSTM1-204ENST00000509789 HMGB2P26583 209 aaKnown RBP17.75■□□□□ 0.43
CYSTM1-204ENST00000509789 SLC27A3Q5K4L6 730 aa17.75■□□□□ 0.43
CYSTM1-204ENST00000509789 CCDC125Q86Z20 511 aa17.75■□□□□ 0.43
CYSTM1-204ENST00000509789 DBF4Q9UBU7 674 aaPredicted RBP17.75■□□□□ 0.43
CYSTM1-204ENST00000509789 CYP19A1P11511 503 aaPredicted RBP17.74■□□□□ 0.43
CYSTM1-204ENST00000509789 ITPK1Q13572 414 aa17.74■□□□□ 0.43
CYSTM1-204ENST00000509789 BCL2L13Q9BXK5 485 aa17.74■□□□□ 0.43
CYSTM1-204ENST00000509789 BCAR3O75815 825 aa17.73■□□□□ 0.43
CYSTM1-204ENST00000509789 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
CYSTM1-204ENST00000509789 KCNQ4P56696 695 aa17.72■□□□□ 0.43
CYSTM1-204ENST00000509789 TXNRD1Q16881 649 aa17.72■□□□□ 0.43
CYSTM1-204ENST00000509789 MRPL50Q8N5N7 158 aaKnown RBP17.72■□□□□ 0.43
CYSTM1-204ENST00000509789 DDX21Q9NR30 783 aaKnown RBP eCLIP17.72■□□□□ 0.43
CYSTM1-204ENST00000509789 HYPKQ9NX55 129 aa17.72■□□□□ 0.43
CYSTM1-204ENST00000509789 CHPF2Q9P2E5 772 aa17.72■□□□□ 0.43
CYSTM1-204ENST00000509789 A1BGP04217 495 aa17.71■□□□□ 0.43
CYSTM1-204ENST00000509789 BAG6P46379 1132 aa17.71■□□□□ 0.43
CYSTM1-204ENST00000509789 BRPF1P55201 1214 aaPredicted RBP17.71■□□□□ 0.43
CYSTM1-204ENST00000509789 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
CYSTM1-204ENST00000509789 MYL6BP14649 208 aa17.7■□□□□ 0.42
CYSTM1-204ENST00000509789 CRKLP46109 303 aaKnown RBP17.7■□□□□ 0.42
CYSTM1-204ENST00000509789 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.7■□□□□ 0.42
CYSTM1-204ENST00000509789 LINC00116Q8NCU8 138 aa17.7■□□□□ 0.42
CYSTM1-204ENST00000509789 CCDC87Q9NVE4 849 aa17.7■□□□□ 0.42
CYSTM1-204ENST00000509789 EP400Q96L91 3159 aa17.69■□□□□ 0.42
CYSTM1-204ENST00000509789 C5P01031 1676 aa17.69■□□□□ 0.42
CYSTM1-204ENST00000509789 PDIA6Q15084 440 aa17.69■□□□□ 0.42
CYSTM1-204ENST00000509789 RC3H1Q5TC82 1133 aaKnown RBP17.69■□□□□ 0.42
CYSTM1-204ENST00000509789 PROM2Q8N271 834 aa17.69■□□□□ 0.42
CYSTM1-204ENST00000509789 FRAT1Q92837 279 aaPredicted RBP17.69■□□□□ 0.42
CYSTM1-204ENST00000509789 LRRC4BQ9NT99 713 aa17.69■□□□□ 0.42
CYSTM1-204ENST00000509789 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
CYSTM1-204ENST00000509789 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
CYSTM1-204ENST00000509789 ZNF831Q5JPB2 1677 aa17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 NBPF26B4DH59 902 aa17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 ANXA1P04083 346 aa17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 CANXP27824 592 aaKnown RBP17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 EN1Q05925 392 aaPredicted RBP17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 PROSER3Q2NL68 480 aa17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 NBPF14Q5TI25 921 aa17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 NBPF10Q6P3W6 841 aaKnown RBP17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 NBPF15Q8N660 670 aa17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 CAMKK2Q96RR4 588 aa17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 NOB1Q9ULX3 412 aaKnown RBP17.68■□□□□ 0.42
CYSTM1-204ENST00000509789 LY75O60449 1722 aa17.67■□□□□ 0.42
CYSTM1-204ENST00000509789 PIP4K2AP48426 406 aaPredicted RBP17.67■□□□□ 0.42
CYSTM1-204ENST00000509789 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
CYSTM1-204ENST00000509789 TNS1Q9HBL0 1735 aaKnown RBP17.67■□□□□ 0.42
CYSTM1-204ENST00000509789 IL6STP40189 918 aaPredicted RBP17.66■□□□□ 0.42
CYSTM1-204ENST00000509789 FLIIQ13045 1269 aa17.66■□□□□ 0.42
CYSTM1-204ENST00000509789 ZKSCAN2Q63HK3 967 aa17.66■□□□□ 0.42
CYSTM1-204ENST00000509789 G2E3Q7L622 706 aa17.66■□□□□ 0.42
CYSTM1-204ENST00000509789 PHAXQ9H814 394 aaKnown RBP17.66■□□□□ 0.42
CYSTM1-204ENST00000509789 ZBTB1Q9Y2K1 713 aa17.66■□□□□ 0.42
CYSTM1-204ENST00000509789 TJP1Q07157 1748 aa17.66■□□□□ 0.42
CYSTM1-204ENST00000509789 CACNA1FO60840 1977 aa17.66■□□□□ 0.42
CYSTM1-204ENST00000509789 LAMB4A4D0S4 1761 aa17.66■□□□□ 0.42
CYSTM1-204ENST00000509789 RRP1P56182 461 aaKnown RBP17.65■□□□□ 0.42
CYSTM1-204ENST00000509789 EZH2Q15910 746 aaKnown RBP17.65■□□□□ 0.42
CYSTM1-204ENST00000509789 DEFB132Q7Z7B7 95 aa17.65■□□□□ 0.42
CYSTM1-204ENST00000509789 ARHGAP45Q92619 1136 aa17.65■□□□□ 0.42
CYSTM1-204ENST00000509789 AK7Q96M32 723 aa17.65■□□□□ 0.42
CYSTM1-204ENST00000509789 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
CYSTM1-204ENST00000509789 PTPRCP08575 1304 aa17.65■□□□□ 0.42
CYSTM1-204ENST00000509789 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
CYSTM1-204ENST00000509789 PLIN1O60240 522 aa17.64■□□□□ 0.41
CYSTM1-204ENST00000509789 DDX58O95786 925 aaKnown RBP17.64■□□□□ 0.41
CYSTM1-204ENST00000509789 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
CYSTM1-204ENST00000509789 FKBP5Q13451 457 aaPredicted RBP17.64■□□□□ 0.41
CYSTM1-204ENST00000509789 ILDR2Q71H61 639 aa17.64■□□□□ 0.41
CYSTM1-204ENST00000509789 COPS6Q7L5N1 327 aa17.64■□□□□ 0.41
CYSTM1-204ENST00000509789 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
CYSTM1-204ENST00000509789 UPF1Q92900 1129 aaKnown RBP eCLIP17.64■□□□□ 0.416e-7■■■■■ 56.9
CYSTM1-204ENST00000509789 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
CYSTM1-204ENST00000509789 RPS6KA4O75676 772 aa17.63■□□□□ 0.41
CYSTM1-204ENST00000509789 MS4A1P11836 297 aa17.63■□□□□ 0.41
CYSTM1-204ENST00000509789 ATF7IPQ6VMQ6 1270 aa17.63■□□□□ 0.41
CYSTM1-204ENST00000509789 LRP10Q7Z4F1 713 aa17.63■□□□□ 0.41
CYSTM1-204ENST00000509789 RTCBQ9Y3I0 505 aaKnown RBP17.63■□□□□ 0.41
CYSTM1-204ENST00000509789 RNF123Q5XPI4 1314 aa17.63■□□□□ 0.41
CYSTM1-204ENST00000509789 A0A087WZG4 1122 aa17.62■□□□□ 0.41
CYSTM1-204ENST00000509789 GNPATO15228 680 aa17.62■□□□□ 0.41
CYSTM1-204ENST00000509789 EIF5P55010 431 aaKnown RBP17.62■□□□□ 0.41
CYSTM1-204ENST00000509789 ARXQ96QS3 562 aa17.62■□□□□ 0.41
CYSTM1-204ENST00000509789 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
CYSTM1-204ENST00000509789 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
CYSTM1-204ENST00000509789 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
CYSTM1-204ENST00000509789 KIF6Q6ZMV9 814 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms