RNA–Protein interactions for RNA: ENST00000509632.5

SDHA-212, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-212ENST00000509632 NARFQ9UHQ1 456 aa28.96■■■□□ 2.23
SDHA-212ENST00000509632 VIRMAQ69YN4 1812 aaKnown RBP28.94■■■□□ 2.22
SDHA-212ENST00000509632 C4AP0C0L4 1744 aa28.94■■■□□ 2.22
SDHA-212ENST00000509632 POLRMTO00411 1230 aaKnown RBP28.93■■■□□ 2.22
SDHA-212ENST00000509632 TEX13AQ9BXU3 409 aaPredicted RBP28.93■■■□□ 2.22
SDHA-212ENST00000509632 COL15A1P39059 1388 aa28.92■■■□□ 2.22
SDHA-212ENST00000509632 BTBD11A6QL63 1104 aa28.92■■■□□ 2.22
SDHA-212ENST00000509632 KCNA3P22001 575 aa28.92■■■□□ 2.22
SDHA-212ENST00000509632 ATP10DQ9P241 1426 aa28.92■■■□□ 2.22
SDHA-212ENST00000509632 RTF1Q92541 710 aaKnown RBP28.91■■■□□ 2.22
SDHA-212ENST00000509632 FMNL2Q96PY5 1086 aa28.91■■■□□ 2.22
SDHA-212ENST00000509632 CEMIPQ8WUJ3 1361 aa28.9■■■□□ 2.22
SDHA-212ENST00000509632 HEG1Q9ULI3 1381 aa28.9■■■□□ 2.22
SDHA-212ENST00000509632 KIF13BQ9NQT8 1826 aa28.9■■■□□ 2.22
SDHA-212ENST00000509632 KCNQ3O43525 872 aa28.9■■■□□ 2.22
SDHA-212ENST00000509632 NFIXQ14938 502 aa28.9■■■□□ 2.22
SDHA-212ENST00000509632 ARHGAP27Q6ZUM4 889 aa28.9■■■□□ 2.22
SDHA-212ENST00000509632 N4BP2Q86UW6 1770 aaPredicted RBP28.89■■■□□ 2.22
SDHA-212ENST00000509632 EIF5P55010 431 aaKnown RBP28.89■■■□□ 2.22
SDHA-212ENST00000509632 MCM10Q7L590 875 aa28.89■■■□□ 2.22
SDHA-212ENST00000509632 ZNF526Q8TF50 670 aaPredicted RBP28.89■■■□□ 2.22
SDHA-212ENST00000509632 BCL2L12Q9HB09 334 aa28.89■■■□□ 2.22
SDHA-212ENST00000509632 GPBP1L1Q9HC44 474 aaPredicted RBP28.89■■■□□ 2.22
SDHA-212ENST00000509632 PIM2Q9P1W9 311 aa28.89■■■□□ 2.22
SDHA-212ENST00000509632 A0A087WZG4 1122 aa28.87■■■□□ 2.21
SDHA-212ENST00000509632 CHRNA5P30532 468 aa28.86■■■□□ 2.21
SDHA-212ENST00000509632 ZNF330Q9Y3S2 320 aaPredicted RBP28.86■■■□□ 2.21
SDHA-212ENST00000509632 A1BGP04217 495 aa28.85■■■□□ 2.21
SDHA-212ENST00000509632 DCTN1Q14203 1278 aa28.85■■■□□ 2.21
SDHA-212ENST00000509632 ADCY9O60503 1353 aa28.85■■■□□ 2.21
SDHA-212ENST00000509632 KIAA1551Q9HCM1 1747 aa28.84■■■□□ 2.21
SDHA-212ENST00000509632 SENP3-EIF4A1A0A087X0R7 540 aa28.84■■■□□ 2.21
SDHA-212ENST00000509632 SERPINB2P05120 415 aa28.84■■■□□ 2.21
SDHA-212ENST00000509632 DALRD3Q5D0E6 543 aaKnown RBP28.84■■■□□ 2.21
SDHA-212ENST00000509632 UBR2Q8IWV8 1755 aa28.83■■■□□ 2.21
SDHA-212ENST00000509632 BICDL1Q6ZP65 573 aa28.83■■■□□ 2.21
SDHA-212ENST00000509632 TBC1D2BQ9UPU7 963 aa28.83■■■□□ 2.21
SDHA-212ENST00000509632 HTATSF1O43719 755 aaKnown RBP28.82■■■□□ 2.2
SDHA-212ENST00000509632 IL6STP40189 918 aaPredicted RBP28.82■■■□□ 2.2
SDHA-212ENST00000509632 USP16Q9Y5T5 823 aa28.82■■■□□ 2.2
SDHA-212ENST00000509632 NEFMP07197 916 aa28.81■■■□□ 2.2
SDHA-212ENST00000509632 NPM2Q86SE8 214 aaKnown RBP28.81■■■□□ 2.2
SDHA-212ENST00000509632 SIPA1L3O60292 1781 aaPredicted RBP28.78■■■□□ 2.2
SDHA-212ENST00000509632 TBC1D9BQ66K14 1250 aa28.78■■■□□ 2.2
SDHA-212ENST00000509632 PRAMEF22A3QJZ6 481 aa28.77■■■□□ 2.2
SDHA-212ENST00000509632 SNRPA1P09661 255 aaKnown RBP28.77■■■□□ 2.2
SDHA-212ENST00000509632 TAF7Q15545 349 aaPredicted RBP28.77■■■□□ 2.2
SDHA-212ENST00000509632 MIS18AQ9NYP9 233 aa28.75■■■□□ 2.19
SDHA-212ENST00000509632 PIP4K2AP48426 406 aaPredicted RBP28.74■■■□□ 2.19
SDHA-212ENST00000509632 PLEKHF1Q96S99 279 aa28.74■■■□□ 2.19
SDHA-212ENST00000509632 C9orf131Q5VYM1 1079 aa28.73■■■□□ 2.19
SDHA-212ENST00000509632 CAMTA2O94983 1202 aa28.72■■■□□ 2.19
SDHA-212ENST00000509632 DDX10Q13206 875 aaKnown RBP28.72■■■□□ 2.19
SDHA-212ENST00000509632 DZIP3Q86Y13 1208 aaKnown RBP28.72■■■□□ 2.19
SDHA-212ENST00000509632 C2CD5Q86YS7 1000 aa28.72■■■□□ 2.19
SDHA-212ENST00000509632 PNNQ9H307 717 aaKnown RBP28.72■■■□□ 2.19
SDHA-212ENST00000509632 H0YIN7 160 aa28.71■■■□□ 2.19
SDHA-212ENST00000509632 BRCA1P38398 1863 aaKnown RBP28.7■■■□□ 2.19
SDHA-212ENST00000509632 RALBP1Q15311 655 aa28.7■■■□□ 2.18
SDHA-212ENST00000509632 SETDB2Q96T68 719 aa28.7■■■□□ 2.18
SDHA-212ENST00000509632 NFE2L2Q16236 605 aa28.69■■■□□ 2.18
SDHA-212ENST00000509632 CCDC24Q8N4L8 307 aa28.69■■■□□ 2.18
SDHA-212ENST00000509632 AFDNP55196 1824 aaKnown RBP28.69■■■□□ 2.18
SDHA-212ENST00000509632 TTLL6Q8N841 843 aa28.68■■■□□ 2.18
SDHA-212ENST00000509632 CARMIL3Q8ND23 1372 aa28.67■■■□□ 2.18
SDHA-212ENST00000509632 KIF3CO14782 793 aa28.67■■■□□ 2.18
SDHA-212ENST00000509632 PRR5LQ6MZQ0 368 aa28.67■■■□□ 2.18
SDHA-212ENST00000509632 PNISRQ8TF01 805 aaKnown RBP28.67■■■□□ 2.18
SDHA-212ENST00000509632 BRIP1Q9BX63 1249 aa28.67■■■□□ 2.18
SDHA-212ENST00000509632 MAPK8IP3Q9UPT6 1336 aa28.66■■■□□ 2.18
SDHA-212ENST00000509632 NBPF26B4DH59 902 aa28.65■■■□□ 2.18
SDHA-212ENST00000509632 NPHP1O15259 732 aa28.65■■■□□ 2.18
SDHA-212ENST00000509632 PDE6BP35913 854 aa28.65■■■□□ 2.18
SDHA-212ENST00000509632 NBPF10Q6P3W6 841 aaKnown RBP28.65■■■□□ 2.18
SDHA-212ENST00000509632 NBPF15Q8N660 670 aa28.65■■■□□ 2.18
SDHA-212ENST00000509632 THUMPD2Q9BTF0 503 aaKnown RBP28.65■■■□□ 2.18
SDHA-212ENST00000509632 RNF181Q9P0P0 153 aa28.65■■■□□ 2.18
SDHA-212ENST00000509632 NRXN2Q9P2S2 1712 aa28.65■■■□□ 2.18
SDHA-212ENST00000509632 ARFGEF1Q9Y6D6 1849 aa28.64■■■□□ 2.18
SDHA-212ENST00000509632 ZNF622Q969S3 477 aaKnown RBP eCLIP28.64■■■□□ 2.18
SDHA-212ENST00000509632 CLEC4GQ6UXB4 293 aa28.63■■■□□ 2.17
SDHA-212ENST00000509632 CNBD1Q8NA66 436 aa28.62■■■□□ 2.17
SDHA-212ENST00000509632 PDZRN3Q9UPQ7 1066 aa28.62■■■□□ 2.17
SDHA-212ENST00000509632 RASSF7Q02833 373 aa28.61■■■□□ 2.17
SDHA-212ENST00000509632 NMRK2Q9NPI5 230 aa28.61■■■□□ 2.17
SDHA-212ENST00000509632 ZNF652Q9Y2D9 606 aa28.61■■■□□ 2.17
SDHA-212ENST00000509632 EIF4A1P60842 406 aaKnown RBP28.59■■■□□ 2.17
SDHA-212ENST00000509632 ST5P78524 1137 aa28.59■■■□□ 2.17
SDHA-212ENST00000509632 RIPK4P57078 832 aa28.58■■■□□ 2.17
SDHA-212ENST00000509632 NBPF5PQ86XG9 351 aaPredicted RBP28.58■■■□□ 2.17
SDHA-212ENST00000509632 NGEFQ8N5V2 710 aa28.58■■■□□ 2.17
SDHA-212ENST00000509632 ZNF219Q9P2Y4 722 aaPredicted RBP28.58■■■□□ 2.17
SDHA-212ENST00000509632 HSPA6P17066 643 aa28.56■■■□□ 2.16
SDHA-212ENST00000509632 SCN7AQ01118 1682 aa28.56■■■□□ 2.16
SDHA-212ENST00000509632 NIP7Q9Y221 180 aaKnown RBP eCLIP28.56■■■□□ 2.16
SDHA-212ENST00000509632 MYBBP1AQ9BQG0 1328 aaKnown RBP28.55■■■□□ 2.16
SDHA-212ENST00000509632 TOMM70O94826 608 aa28.55■■■□□ 2.16
SDHA-212ENST00000509632 LMNB1P20700 586 aa28.55■■■□□ 2.16
SDHA-212ENST00000509632 RRP7AQ9Y3A4 280 aaKnown RBP28.55■■■□□ 2.16
SDHA-212ENST00000509632 DLG5Q8TDM6 1919 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms