RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 CNGB1Q14028 1251 aaPredicted RBP14.07□□□□□ -0.16
CYSTM1-203ENST00000509589 KLRG1Q96E93 195 aa14.07□□□□□ -0.16
CYSTM1-203ENST00000509589 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
CYSTM1-203ENST00000509589 MRC1P22897 1456 aa14.06□□□□□ -0.16
CYSTM1-203ENST00000509589 CYP19A1P11511 503 aaPredicted RBP14.06□□□□□ -0.16
CYSTM1-203ENST00000509589 EIF4G2P78344 907 aaKnown RBP eCLIP14.06□□□□□ -0.16
CYSTM1-203ENST00000509589 FSTL1Q12841 308 aa14.06□□□□□ -0.16
CYSTM1-203ENST00000509589 SLC52A2Q9HAB3 445 aa14.06□□□□□ -0.16
CYSTM1-203ENST00000509589 TNRC6CQ9HCJ0 1690 aaKnown RBP14.06□□□□□ -0.16
CYSTM1-203ENST00000509589 ZPR1O75312 459 aa14.05□□□□□ -0.16
CYSTM1-203ENST00000509589 NFIXQ14938 502 aa14.05□□□□□ -0.16
CYSTM1-203ENST00000509589 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
CYSTM1-203ENST00000509589 COL13A1Q5TAT6 717 aaPredicted RBP14.05□□□□□ -0.16
CYSTM1-203ENST00000509589 JMYQ8N9B5 988 aa14.05□□□□□ -0.16
CYSTM1-203ENST00000509589 BCL2L12Q9HB09 334 aa14.05□□□□□ -0.16
CYSTM1-203ENST00000509589 CARMIL3Q8ND23 1372 aa14.05□□□□□ -0.16
CYSTM1-203ENST00000509589 NRXN2Q9P2S2 1712 aa14.04□□□□□ -0.16
CYSTM1-203ENST00000509589 ZBTB1Q9Y2K1 713 aa14.04□□□□□ -0.16
CYSTM1-203ENST00000509589 COL15A1P39059 1388 aa14.04□□□□□ -0.16
CYSTM1-203ENST00000509589 TIAM2Q8IVF5 1701 aa14.04□□□□□ -0.16
CYSTM1-203ENST00000509589 RNMTO43148 476 aaKnown RBP14.03□□□□□ -0.16
CYSTM1-203ENST00000509589 HMOX1P09601 288 aa14.03□□□□□ -0.16
CYSTM1-203ENST00000509589 NARFQ9UHQ1 456 aa14.03□□□□□ -0.16
CYSTM1-203ENST00000509589 DLEC1Q9Y238 1755 aa14.03□□□□□ -0.16
CYSTM1-203ENST00000509589 SERPINB2P05120 415 aa14.01□□□□□ -0.17
CYSTM1-203ENST00000509589 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
CYSTM1-203ENST00000509589 SMC1BQ8NDV3 1235 aa14.01□□□□□ -0.17
CYSTM1-203ENST00000509589 KNSTRNQ9Y448 316 aa14.01□□□□□ -0.17
CYSTM1-203ENST00000509589 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
CYSTM1-203ENST00000509589 NFKBIEO00221 500 aa14□□□□□ -0.17
CYSTM1-203ENST00000509589 LMNB1P20700 586 aa14□□□□□ -0.17
CYSTM1-203ENST00000509589 CANXP27824 592 aaKnown RBP14□□□□□ -0.17
CYSTM1-203ENST00000509589 MTHFSDQ2M296 383 aaKnown RBP14□□□□□ -0.17
CYSTM1-203ENST00000509589 C2CD5Q86YS7 1000 aa14□□□□□ -0.17
CYSTM1-203ENST00000509589 ANKRD31Q8N7Z5 1873 aa13.99□□□□□ -0.17
CYSTM1-203ENST00000509589 ZC3H4Q9UPT8 1303 aaKnown RBP13.99□□□□□ -0.17
CYSTM1-203ENST00000509589 GLTPD2A6NH11 291 aa13.99□□□□□ -0.17
CYSTM1-203ENST00000509589 CAPN15O75808 1086 aa13.99□□□□□ -0.17
CYSTM1-203ENST00000509589 BICDL1Q6ZP65 573 aa13.99□□□□□ -0.17
CYSTM1-203ENST00000509589 TTLL6Q8N841 843 aa13.99□□□□□ -0.17
CYSTM1-203ENST00000509589 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
CYSTM1-203ENST00000509589 CCDC24Q8N4L8 307 aa13.98□□□□□ -0.17
CYSTM1-203ENST00000509589 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
CYSTM1-203ENST00000509589 COL11A2P13942 1736 aaPredicted RBP13.98□□□□□ -0.17
CYSTM1-203ENST00000509589 SIPA1L3O60292 1781 aaPredicted RBP13.97□□□□□ -0.17
CYSTM1-203ENST00000509589 POTECB2RU33 542 aa13.97□□□□□ -0.17
CYSTM1-203ENST00000509589 VEGFAP15692 232 aaPredicted RBP13.97□□□□□ -0.17
CYSTM1-203ENST00000509589 CC2D1BQ5T0F9 858 aaKnown RBP13.97□□□□□ -0.17
CYSTM1-203ENST00000509589 H0YIN7 160 aa13.96□□□□□ -0.17
CYSTM1-203ENST00000509589 EIF5P55010 431 aaKnown RBP13.96□□□□□ -0.17
CYSTM1-203ENST00000509589 TBC1D9BQ66K14 1250 aa13.96□□□□□ -0.17
CYSTM1-203ENST00000509589 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
CYSTM1-203ENST00000509589 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
CYSTM1-203ENST00000509589 ZNF330Q9Y3S2 320 aaPredicted RBP13.96□□□□□ -0.17
CYSTM1-203ENST00000509589 SCN7AQ01118 1682 aa13.95□□□□□ -0.18
CYSTM1-203ENST00000509589 TNS4Q8IZW8 715 aa13.95□□□□□ -0.18
CYSTM1-203ENST00000509589 ZNF496Q96IT1 587 aaPredicted RBP13.95□□□□□ -0.18
CYSTM1-203ENST00000509589 DICER1Q9UPY3 1922 aaKnown RBP13.94□□□□□ -0.18
CYSTM1-203ENST00000509589 C21orf2O43822 256 aa13.94□□□□□ -0.18
CYSTM1-203ENST00000509589 HSPA1AP0DMV8 641 aaKnown RBP13.94□□□□□ -0.18
CYSTM1-203ENST00000509589 HSPA1BP0DMV9 641 aaKnown RBP13.94□□□□□ -0.18
CYSTM1-203ENST00000509589 PRR5LQ6MZQ0 368 aa13.94□□□□□ -0.18
CYSTM1-203ENST00000509589 ZNF622Q969S3 477 aaKnown RBP eCLIP13.94□□□□□ -0.18
CYSTM1-203ENST00000509589 TBC1D2BQ9UPU7 963 aa13.94□□□□□ -0.18
CYSTM1-203ENST00000509589 KIF7Q2M1P5 1343 aa13.93□□□□□ -0.18
CYSTM1-203ENST00000509589 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
CYSTM1-203ENST00000509589 STARD3NLO95772 234 aa13.93□□□□□ -0.18
CYSTM1-203ENST00000509589 TTC5Q8N0Z6 440 aa13.93□□□□□ -0.18
CYSTM1-203ENST00000509589 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
CYSTM1-203ENST00000509589 COL3A1P02461 1466 aaPredicted RBP13.93□□□□□ -0.18
CYSTM1-203ENST00000509589 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
CYSTM1-203ENST00000509589 POTEJP0CG39 1038 aa13.92□□□□□ -0.18
CYSTM1-203ENST00000509589 ERFEQ4G0M1 354 aa13.92□□□□□ -0.18
CYSTM1-203ENST00000509589 FER1L6Q2WGJ9 1857 aa13.92□□□□□ -0.18
CYSTM1-203ENST00000509589 HEG1Q9ULI3 1381 aa13.92□□□□□ -0.18
CYSTM1-203ENST00000509589 BCORQ6W2J9 1755 aa13.91□□□□□ -0.18
CYSTM1-203ENST00000509589 A0A087WZG4 1122 aa13.91□□□□□ -0.18
CYSTM1-203ENST00000509589 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
CYSTM1-203ENST00000509589 PER1O15534 1290 aaPredicted RBP13.91□□□□□ -0.18
CYSTM1-203ENST00000509589 A1BGP04217 495 aa13.91□□□□□ -0.18
CYSTM1-203ENST00000509589 ZNF790Q6PG37 636 aa13.91□□□□□ -0.18
CYSTM1-203ENST00000509589 BRIP1Q9BX63 1249 aa13.91□□□□□ -0.18
CYSTM1-203ENST00000509589 SLX4Q8IY92 1834 aa13.9□□□□□ -0.18
CYSTM1-203ENST00000509589 PDE6BP35913 854 aa13.9□□□□□ -0.18
CYSTM1-203ENST00000509589 DPY19L2Q6NUT2 758 aa13.9□□□□□ -0.18
CYSTM1-203ENST00000509589 KCNQ3O43525 872 aa13.89□□□□□ -0.19
CYSTM1-203ENST00000509589 DDNO94850 711 aaPredicted RBP13.89□□□□□ -0.19
CYSTM1-203ENST00000509589 CAMTA2O94983 1202 aa13.89□□□□□ -0.19
CYSTM1-203ENST00000509589 PIP4K2AP48426 406 aaPredicted RBP13.89□□□□□ -0.19
CYSTM1-203ENST00000509589 TEFQ10587 303 aa13.89□□□□□ -0.19
CYSTM1-203ENST00000509589 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
CYSTM1-203ENST00000509589 IL6STP40189 918 aaPredicted RBP13.88□□□□□ -0.19
CYSTM1-203ENST00000509589 PRPF40BQ6NWY9 871 aaKnown RBP13.88□□□□□ -0.19
CYSTM1-203ENST00000509589 CNBD1Q8NA66 436 aa13.88□□□□□ -0.19
CYSTM1-203ENST00000509589 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
CYSTM1-203ENST00000509589 MKRN1Q9UHC7 482 aaKnown RBP13.88□□□□□ -0.19
CYSTM1-203ENST00000509589 ARFGEF2Q9Y6D5 1785 aa13.88□□□□□ -0.19
CYSTM1-203ENST00000509589 LTBP3Q9NS15 1303 aa13.88□□□□□ -0.19
CYSTM1-203ENST00000509589 SRGNP10124 158 aa13.87□□□□□ -0.19
CYSTM1-203ENST00000509589 SETDB2Q96T68 719 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms