RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 ZBTB1Q9Y2K1 713 aa19.56■□□□□ 0.72
HMGCL-208ENST00000509389 ARFGEF1Q9Y6D6 1849 aa19.55■□□□□ 0.72
HMGCL-208ENST00000509389 POLRMTO00411 1230 aaKnown RBP19.55■□□□□ 0.72
HMGCL-208ENST00000509389 ARHGAP27Q6ZUM4 889 aa19.55■□□□□ 0.72
HMGCL-208ENST00000509389 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
HMGCL-208ENST00000509389 IL17REQ8NFR9 667 aa19.54■□□□□ 0.72
HMGCL-208ENST00000509389 GAS2L2Q8NHY3 880 aa19.54■□□□□ 0.72
HMGCL-208ENST00000509389 PIM2Q9P1W9 311 aa19.54■□□□□ 0.72
HMGCL-208ENST00000509389 NARFQ9UHQ1 456 aa19.54■□□□□ 0.72
HMGCL-208ENST00000509389 COL15A1P39059 1388 aa19.54■□□□□ 0.72
HMGCL-208ENST00000509389 SIPA1L3O60292 1781 aaPredicted RBP19.53■□□□□ 0.72
HMGCL-208ENST00000509389 TTC5Q8N0Z6 440 aa19.53■□□□□ 0.72
HMGCL-208ENST00000509389 TEFQ10587 303 aa19.52■□□□□ 0.72
HMGCL-208ENST00000509389 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.72
HMGCL-208ENST00000509389 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
HMGCL-208ENST00000509389 CHRNA5P30532 468 aa19.51■□□□□ 0.71
HMGCL-208ENST00000509389 NFIXQ14938 502 aa19.51■□□□□ 0.71
HMGCL-208ENST00000509389 BCL2L12Q9HB09 334 aa19.51■□□□□ 0.71
HMGCL-208ENST00000509389 KIF3CO14782 793 aa19.5■□□□□ 0.71
HMGCL-208ENST00000509389 DALRD3Q5D0E6 543 aaKnown RBP19.5■□□□□ 0.71
HMGCL-208ENST00000509389 ZNF496Q96IT1 587 aaPredicted RBP19.5■□□□□ 0.71
HMGCL-208ENST00000509389 PHACTR3Q96KR7 559 aa19.5■□□□□ 0.71
HMGCL-208ENST00000509389 CFAP53Q96M91 514 aa19.5■□□□□ 0.71
HMGCL-208ENST00000509389 NRXN2Q9P2S2 1712 aa19.49■□□□□ 0.71
HMGCL-208ENST00000509389 STARD3NLO95772 234 aa19.49■□□□□ 0.71
HMGCL-208ENST00000509389 PRKAR2BP31323 418 aa19.49■□□□□ 0.71
HMGCL-208ENST00000509389 ZNF790Q6PG37 636 aa19.49■□□□□ 0.71
HMGCL-208ENST00000509389 HEG1Q9ULI3 1381 aa19.48■□□□□ 0.71
HMGCL-208ENST00000509389 ANP32CO43423 234 aa19.48■□□□□ 0.71
HMGCL-208ENST00000509389 EIF5P55010 431 aaKnown RBP19.48■□□□□ 0.71
HMGCL-208ENST00000509389 RSPH6AQ9H0K4 717 aa19.48■□□□□ 0.71
HMGCL-208ENST00000509389 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
HMGCL-208ENST00000509389 CEMIPQ8WUJ3 1361 aa19.48■□□□□ 0.71
HMGCL-208ENST00000509389 CCER2I3L3R5 266 aa19.46■□□□□ 0.71
HMGCL-208ENST00000509389 SERPINB2P05120 415 aa19.46■□□□□ 0.71
HMGCL-208ENST00000509389 PPP2R1AP30153 589 aa19.46■□□□□ 0.71
HMGCL-208ENST00000509389 C9orf131Q5VYM1 1079 aa19.46■□□□□ 0.71
HMGCL-208ENST00000509389 NUDCQ9Y266 331 aa19.46■□□□□ 0.71
HMGCL-208ENST00000509389 A0A087WZG4 1122 aa19.45■□□□□ 0.7
HMGCL-208ENST00000509389 HSPA6P17066 643 aa19.45■□□□□ 0.7
HMGCL-208ENST00000509389 TEX13AQ9BXU3 409 aaPredicted RBP19.45■□□□□ 0.7
HMGCL-208ENST00000509389 FMNL2Q96PY5 1086 aa19.44■□□□□ 0.7
HMGCL-208ENST00000509389 CEP350Q5VT06 3117 aa19.44■□□□□ 0.7
HMGCL-208ENST00000509389 DLEC1Q9Y238 1755 aa19.44■□□□□ 0.7
HMGCL-208ENST00000509389 KCNQ3O43525 872 aa19.44■□□□□ 0.7
HMGCL-208ENST00000509389 U2AF1L5P0DN76 240 aaPredicted RBP19.44■□□□□ 0.7
HMGCL-208ENST00000509389 U2AF1Q01081 240 aaKnown RBP eCLIP19.44■□□□□ 0.7
HMGCL-208ENST00000509389 SBF1O95248 1867 aa19.43■□□□□ 0.7
HMGCL-208ENST00000509389 BTBD11A6QL63 1104 aa19.43■□□□□ 0.7
HMGCL-208ENST00000509389 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
HMGCL-208ENST00000509389 SCN7AQ01118 1682 aa19.42■□□□□ 0.7
HMGCL-208ENST00000509389 A1BGP04217 495 aa19.42■□□□□ 0.7
HMGCL-208ENST00000509389 IL6STP40189 918 aaPredicted RBP19.42■□□□□ 0.7
HMGCL-208ENST00000509389 NMRK2Q9NPI5 230 aa19.42■□□□□ 0.7
HMGCL-208ENST00000509389 RNF181Q9P0P0 153 aa19.42■□□□□ 0.7
HMGCL-208ENST00000509389 TBC1D2BQ9UPU7 963 aa19.42■□□□□ 0.7
HMGCL-208ENST00000509389 ZNF330Q9Y3S2 320 aaPredicted RBP19.42■□□□□ 0.7
HMGCL-208ENST00000509389 CARMIL3Q8ND23 1372 aa19.42■□□□□ 0.7
HMGCL-208ENST00000509389 TBC1D9BQ66K14 1250 aa19.41■□□□□ 0.7
HMGCL-208ENST00000509389 C2CD5Q86YS7 1000 aa19.4■□□□□ 0.7
HMGCL-208ENST00000509389 TOMM70O94826 608 aa19.39■□□□□ 0.69
HMGCL-208ENST00000509389 MCM10Q7L590 875 aa19.39■□□□□ 0.69
HMGCL-208ENST00000509389 ANKRD31Q8N7Z5 1873 aa19.39■□□□□ 0.69
HMGCL-208ENST00000509389 RTF1Q92541 710 aaKnown RBP19.39■□□□□ 0.69
HMGCL-208ENST00000509389 H0YIN7 160 aa19.38■□□□□ 0.69
HMGCL-208ENST00000509389 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
HMGCL-208ENST00000509389 USP16Q9Y5T5 823 aa19.38■□□□□ 0.69
HMGCL-208ENST00000509389 RASSF7Q02833 373 aa19.37■□□□□ 0.69
HMGCL-208ENST00000509389 RALBP1Q15311 655 aa19.37■□□□□ 0.69
HMGCL-208ENST00000509389 PRAMEF22A3QJZ6 481 aa19.36■□□□□ 0.69
HMGCL-208ENST00000509389 CAMTA2O94983 1202 aa19.36■□□□□ 0.69
HMGCL-208ENST00000509389 DCTN1Q14203 1278 aa19.36■□□□□ 0.69
HMGCL-208ENST00000509389 NPM2Q86SE8 214 aaKnown RBP19.36■□□□□ 0.69
HMGCL-208ENST00000509389 KDM2BQ8NHM5 1336 aa19.35■□□□□ 0.69
HMGCL-208ENST00000509389 HTATSF1O43719 755 aaKnown RBP19.35■□□□□ 0.69
HMGCL-208ENST00000509389 PIP4K2AP48426 406 aaPredicted RBP19.35■□□□□ 0.69
HMGCL-208ENST00000509389 PRR5LQ6MZQ0 368 aa19.35■□□□□ 0.69
HMGCL-208ENST00000509389 CCDC24Q8N4L8 307 aa19.35■□□□□ 0.69
HMGCL-208ENST00000509389 BCORQ6W2J9 1755 aa19.35■□□□□ 0.69
HMGCL-208ENST00000509389 SNRPA1P09661 255 aaKnown RBP19.34■□□□□ 0.69
HMGCL-208ENST00000509389 DZIP3Q86Y13 1208 aaKnown RBP19.34■□□□□ 0.69
HMGCL-208ENST00000509389 BRIP1Q9BX63 1249 aa19.34■□□□□ 0.69
HMGCL-208ENST00000509389 CCDC88AQ3V6T2 1871 aa19.34■□□□□ 0.69
HMGCL-208ENST00000509389 MYBBP1AQ9BQG0 1328 aaKnown RBP19.34■□□□□ 0.69
HMGCL-208ENST00000509389 PDE6BP35913 854 aa19.33■□□□□ 0.69
HMGCL-208ENST00000509389 PRELPP51888 382 aa19.33■□□□□ 0.69
HMGCL-208ENST00000509389 SETDB2Q96T68 719 aa19.33■□□□□ 0.69
HMGCL-208ENST00000509389 COL11A2P13942 1736 aaPredicted RBP19.33■□□□□ 0.68
HMGCL-208ENST00000509389 LMNB1P20700 586 aa19.32■□□□□ 0.68
HMGCL-208ENST00000509389 RBM46Q8TBY0 533 aaKnown RBP19.32■□□□□ 0.68
HMGCL-208ENST00000509389 ZNF622Q969S3 477 aaKnown RBP eCLIP19.32■□□□□ 0.68
HMGCL-208ENST00000509389 PDZRN3Q9UPQ7 1066 aa19.32■□□□□ 0.68
HMGCL-208ENST00000509389 TNRC6CQ9HCJ0 1690 aaKnown RBP19.32■□□□□ 0.68
HMGCL-208ENST00000509389 DLG5Q8TDM6 1919 aa19.32■□□□□ 0.68
HMGCL-208ENST00000509389 APLP1P51693 650 aa19.32■□□□□ 0.68
HMGCL-208ENST00000509389 C16orf71Q8IYS4 520 aaPredicted RBP19.32■□□□□ 0.68
HMGCL-208ENST00000509389 RRAGCQ9HB90 399 aa19.32■□□□□ 0.68
HMGCL-208ENST00000509389 ZC3H4Q9UPT8 1303 aaKnown RBP19.31■□□□□ 0.68
HMGCL-208ENST00000509389 NFKBIEO00221 500 aa19.31■□□□□ 0.68
HMGCL-208ENST00000509389 TAF7Q15545 349 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms