RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 TAF7Q15545 349 aaPredicted RBP20.79■□□□□ 0.92
COMMD8-202ENST00000509220 COL15A1P39059 1388 aa20.78■□□□□ 0.92
COMMD8-202ENST00000509220 ZPR1O75312 459 aa20.78■□□□□ 0.92
COMMD8-202ENST00000509220 YY1P25490 414 aa20.78■□□□□ 0.92
COMMD8-202ENST00000509220 UTRNP46939 3433 aa20.78■□□□□ 0.92
COMMD8-202ENST00000509220 KCNQ3O43525 872 aa20.77■□□□□ 0.92
COMMD8-202ENST00000509220 SRP68Q9UHB9 627 aaKnown RBP20.77■□□□□ 0.92
COMMD8-202ENST00000509220 NARFQ9UHQ1 456 aa20.77■□□□□ 0.92
COMMD8-202ENST00000509220 PARP3Q9Y6F1 533 aa20.77■□□□□ 0.92
COMMD8-202ENST00000509220 PNISRQ8TF01 805 aaKnown RBP20.76■□□□□ 0.91
COMMD8-202ENST00000509220 KIF13BQ9NQT8 1826 aa20.76■□□□□ 0.91
COMMD8-202ENST00000509220 CHD4Q14839 1912 aa20.75■□□□□ 0.91
COMMD8-202ENST00000509220 A0A087WZG4 1122 aa20.75■□□□□ 0.91
COMMD8-202ENST00000509220 CANXP27824 592 aaKnown RBP20.75■□□□□ 0.91
COMMD8-202ENST00000509220 EIF5P55010 431 aaKnown RBP20.75■□□□□ 0.91
COMMD8-202ENST00000509220 FKBP8Q14318 412 aa20.75■□□□□ 0.91
COMMD8-202ENST00000509220 GRIN3BO60391 1043 aa20.74■□□□□ 0.91
COMMD8-202ENST00000509220 SNRPA1P09661 255 aaKnown RBP20.74■□□□□ 0.91
COMMD8-202ENST00000509220 USPL1Q5W0Q7 1092 aa20.74■□□□□ 0.91
COMMD8-202ENST00000509220 PELP1Q8IZL8 1130 aaKnown RBP20.74■□□□□ 0.91
COMMD8-202ENST00000509220 GOLGB1Q14789 3259 aaKnown RBP20.74■□□□□ 0.91
COMMD8-202ENST00000509220 IL6STP40189 918 aaPredicted RBP20.73■□□□□ 0.91
COMMD8-202ENST00000509220 WDR43Q15061 677 aaKnown RBP eCLIP20.73■□□□□ 0.91
COMMD8-202ENST00000509220 C10orf71Q711Q0 1435 aa20.72■□□□□ 0.91
COMMD8-202ENST00000509220 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
COMMD8-202ENST00000509220 YBX3P16989 372 aaKnown RBP eCLIP20.72■□□□□ 0.91
COMMD8-202ENST00000509220 TM4SF1P30408 202 aa20.72■□□□□ 0.91
COMMD8-202ENST00000509220 TGFB2P61812 414 aa20.72■□□□□ 0.91
COMMD8-202ENST00000509220 RIPK4P57078 832 aa20.71■□□□□ 0.91
COMMD8-202ENST00000509220 USP16Q9Y5T5 823 aa20.71■□□□□ 0.91
COMMD8-202ENST00000509220 A1BGP04217 495 aa20.7■□□□□ 0.9
COMMD8-202ENST00000509220 TMPOP42166 694 aaKnown RBP20.7■□□□□ 0.9
COMMD8-202ENST00000509220 LMOD3Q0VAK6 560 aa20.7■□□□□ 0.9
COMMD8-202ENST00000509220 NPM2Q86SE8 214 aaKnown RBP20.7■□□□□ 0.9
COMMD8-202ENST00000509220 RUNDC1Q96C34 613 aa20.7■□□□□ 0.9
COMMD8-202ENST00000509220 KDM3BQ7LBC6 1761 aa20.69■□□□□ 0.9
COMMD8-202ENST00000509220 POLRMTO00411 1230 aaKnown RBP20.69■□□□□ 0.9
COMMD8-202ENST00000509220 DDR1Q08345 913 aa20.69■□□□□ 0.9
COMMD8-202ENST00000509220 BCL2L12Q9HB09 334 aa20.69■□□□□ 0.9
COMMD8-202ENST00000509220 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
COMMD8-202ENST00000509220 THUMPD2Q9BTF0 503 aaKnown RBP20.68■□□□□ 0.9
COMMD8-202ENST00000509220 ADAMTS8Q9UP79 889 aa20.68■□□□□ 0.9
COMMD8-202ENST00000509220 PXDNLA1KZ92 1463 aa20.68■□□□□ 0.9
COMMD8-202ENST00000509220 KIAA1551Q9HCM1 1747 aa20.67■□□□□ 0.9
COMMD8-202ENST00000509220 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
COMMD8-202ENST00000509220 NFIXQ14938 502 aa20.67■□□□□ 0.9
COMMD8-202ENST00000509220 BABAM1Q9NWV8 329 aa20.67■□□□□ 0.9
COMMD8-202ENST00000509220 CCDC146Q8IYE0 955 aa20.66■□□□□ 0.9
COMMD8-202ENST00000509220 ZNF330Q9Y3S2 320 aaPredicted RBP20.66■□□□□ 0.9
COMMD8-202ENST00000509220 EIF4A1P60842 406 aaKnown RBP20.65■□□□□ 0.9
COMMD8-202ENST00000509220 TBC1D2BQ9UPU7 963 aa20.65■□□□□ 0.9
COMMD8-202ENST00000509220 N4BP2Q86UW6 1770 aaPredicted RBP20.64■□□□□ 0.9
COMMD8-202ENST00000509220 SCN7AQ01118 1682 aa20.64■□□□□ 0.9
COMMD8-202ENST00000509220 GIGYF1O75420 1035 aaPredicted RBP20.64■□□□□ 0.89
COMMD8-202ENST00000509220 LAMB4A4D0S4 1761 aa20.64■□□□□ 0.89
COMMD8-202ENST00000509220 NRXN2Q9P2S2 1712 aa20.64■□□□□ 0.89
COMMD8-202ENST00000509220 AFDNP55196 1824 aaKnown RBP20.63■□□□□ 0.89
COMMD8-202ENST00000509220 A0A0G2JLW4 131 aa20.63■□□□□ 0.89
COMMD8-202ENST00000509220 DZIP3Q86Y13 1208 aaKnown RBP20.63■□□□□ 0.89
COMMD8-202ENST00000509220 RGL2O15211 777 aa20.62■□□□□ 0.89
COMMD8-202ENST00000509220 CAMTA2O94983 1202 aa20.62■□□□□ 0.89
COMMD8-202ENST00000509220 SERPINB2P05120 415 aa20.62■□□□□ 0.89
COMMD8-202ENST00000509220 DPEP1P16444 411 aa20.62■□□□□ 0.89
COMMD8-202ENST00000509220 TSPYL4Q9UJ04 414 aa20.62■□□□□ 0.89
COMMD8-202ENST00000509220 RRP7AQ9Y3A4 280 aaKnown RBP20.62■□□□□ 0.89
COMMD8-202ENST00000509220 NBPF26B4DH59 902 aa20.61■□□□□ 0.89
COMMD8-202ENST00000509220 NEUROD2Q15784 382 aa20.61■□□□□ 0.89
COMMD8-202ENST00000509220 NBPF10Q6P3W6 841 aaKnown RBP20.61■□□□□ 0.89
COMMD8-202ENST00000509220 CLEC4GQ6UXB4 293 aa20.61■□□□□ 0.89
COMMD8-202ENST00000509220 NBPF15Q8N660 670 aa20.61■□□□□ 0.89
COMMD8-202ENST00000509220 BRCA1P38398 1863 aaKnown RBP20.6■□□□□ 0.89
COMMD8-202ENST00000509220 BCORQ6W2J9 1755 aa20.6■□□□□ 0.89
COMMD8-202ENST00000509220 KCNA3P22001 575 aa20.6■□□□□ 0.89
COMMD8-202ENST00000509220 PIP4K2AP48426 406 aaPredicted RBP20.6■□□□□ 0.89
COMMD8-202ENST00000509220 TBC1D9BQ66K14 1250 aa20.6■□□□□ 0.89
COMMD8-202ENST00000509220 TRIM35Q9UPQ4 493 aa20.6■□□□□ 0.89
COMMD8-202ENST00000509220 BICDL1Q6ZP65 573 aa20.59■□□□□ 0.89
COMMD8-202ENST00000509220 ZNF784Q8NCA9 323 aaPredicted RBP20.59■□□□□ 0.89
COMMD8-202ENST00000509220 PIM2Q9P1W9 311 aa20.59■□□□□ 0.89
COMMD8-202ENST00000509220 WWC3Q9ULE0 1092 aa20.59■□□□□ 0.89
COMMD8-202ENST00000509220 CARMIL3Q8ND23 1372 aa20.59■□□□□ 0.89
COMMD8-202ENST00000509220 SETDB2Q96T68 719 aa20.58■□□□□ 0.89
COMMD8-202ENST00000509220 BCS1LQ9Y276 419 aa20.58■□□□□ 0.89
COMMD8-202ENST00000509220 ZNF652Q9Y2D9 606 aa20.58■□□□□ 0.89
COMMD8-202ENST00000509220 ERBB4Q15303 1308 aa20.56■□□□□ 0.88
COMMD8-202ENST00000509220 CHL1O00533 1208 aa20.56■□□□□ 0.88
COMMD8-202ENST00000509220 ANP32CO43423 234 aa20.56■□□□□ 0.88
COMMD8-202ENST00000509220 ARFGEF1Q9Y6D6 1849 aa20.55■□□□□ 0.88
COMMD8-202ENST00000509220 CHRNA5P30532 468 aa20.54■□□□□ 0.88
COMMD8-202ENST00000509220 DALRD3Q5D0E6 543 aaKnown RBP20.54■□□□□ 0.88
COMMD8-202ENST00000509220 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
COMMD8-202ENST00000509220 APAF1O14727 1248 aa20.53■□□□□ 0.88
COMMD8-202ENST00000509220 PRR5LQ6MZQ0 368 aa20.53■□□□□ 0.88
COMMD8-202ENST00000509220 ERVV-1B6SEH8 477 aa20.52■□□□□ 0.88
COMMD8-202ENST00000509220 CCDC184Q52MB2 194 aa20.52■□□□□ 0.88
COMMD8-202ENST00000509220 CFAP44Q96MT7 982 aa20.52■□□□□ 0.88
COMMD8-202ENST00000509220 BRIP1Q9BX63 1249 aa20.52■□□□□ 0.88
COMMD8-202ENST00000509220 DLEC1Q9Y238 1755 aa20.51■□□□□ 0.87
COMMD8-202ENST00000509220 H0YIN7 160 aa20.51■□□□□ 0.87
COMMD8-202ENST00000509220 PDE6BP35913 854 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms