RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 NRXN2Q9P2S2 1712 aa14.29□□□□□ -0.12
SIL1-210ENST00000508639 SIPA1L3O60292 1781 aaPredicted RBP14.28□□□□□ -0.12
SIL1-210ENST00000508639 FCHSD2O94868 740 aa14.28□□□□□ -0.12
SIL1-210ENST00000508639 NFIXQ14938 502 aa14.28□□□□□ -0.12
SIL1-210ENST00000508639 ARHGAP27Q6ZUM4 889 aa14.28□□□□□ -0.12
SIL1-210ENST00000508639 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
SIL1-210ENST00000508639 PHACTR3Q96KR7 559 aa14.27□□□□□ -0.13
SIL1-210ENST00000508639 NMRK2Q9NPI5 230 aa14.27□□□□□ -0.13
SIL1-210ENST00000508639 KCNQ3O43525 872 aa14.26□□□□□ -0.13
SIL1-210ENST00000508639 HSPA6P17066 643 aa14.26□□□□□ -0.13
SIL1-210ENST00000508639 NARFQ9UHQ1 456 aa14.26□□□□□ -0.13
SIL1-210ENST00000508639 EIF5P55010 431 aaKnown RBP14.25□□□□□ -0.13
SIL1-210ENST00000508639 CNGB1Q14028 1251 aaPredicted RBP14.25□□□□□ -0.13
SIL1-210ENST00000508639 C9orf131Q5VYM1 1079 aa14.25□□□□□ -0.13
SIL1-210ENST00000508639 ZNF496Q96IT1 587 aaPredicted RBP14.25□□□□□ -0.13
SIL1-210ENST00000508639 PIM2Q9P1W9 311 aa14.25□□□□□ -0.13
SIL1-210ENST00000508639 COL15A1P39059 1388 aa14.24□□□□□ -0.13
SIL1-210ENST00000508639 CARMIL3Q8ND23 1372 aa14.24□□□□□ -0.13
SIL1-210ENST00000508639 VSIG10Q8N0Z9 540 aa14.24□□□□□ -0.13
SIL1-210ENST00000508639 DNAJC5GQ8N7S2 189 aa14.24□□□□□ -0.13
SIL1-210ENST00000508639 ANKRD31Q8N7Z5 1873 aa14.23□□□□□ -0.13
SIL1-210ENST00000508639 CEMIPQ8WUJ3 1361 aa14.22□□□□□ -0.13
SIL1-210ENST00000508639 SERPINB2P05120 415 aa14.22□□□□□ -0.13
SIL1-210ENST00000508639 CANXP27824 592 aaKnown RBP14.22□□□□□ -0.13
SIL1-210ENST00000508639 DALRD3Q5D0E6 543 aaKnown RBP14.22□□□□□ -0.13
SIL1-210ENST00000508639 RSPH6AQ9H0K4 717 aa14.22□□□□□ -0.13
SIL1-210ENST00000508639 CCDC88AQ3V6T2 1871 aa14.22□□□□□ -0.13
SIL1-210ENST00000508639 PRAMEF22A3QJZ6 481 aa14.21□□□□□ -0.13
SIL1-210ENST00000508639 ZPR1O75312 459 aa14.21□□□□□ -0.13
SIL1-210ENST00000508639 A1BGP04217 495 aa14.21□□□□□ -0.13
SIL1-210ENST00000508639 ZNF790Q6PG37 636 aa14.21□□□□□ -0.13
SIL1-210ENST00000508639 DLEC1Q9Y238 1755 aa14.21□□□□□ -0.13
SIL1-210ENST00000508639 HEG1Q9ULI3 1381 aa14.21□□□□□ -0.14
SIL1-210ENST00000508639 GNAT3A8MTJ3 354 aa14.2□□□□□ -0.14
SIL1-210ENST00000508639 U2SURPO15042 1029 aaKnown RBP14.2□□□□□ -0.14
SIL1-210ENST00000508639 RASSF7Q02833 373 aa14.2□□□□□ -0.14
SIL1-210ENST00000508639 TBC1D9BQ66K14 1250 aa14.2□□□□□ -0.14
SIL1-210ENST00000508639 CCDC24Q8N4L8 307 aa14.2□□□□□ -0.14
SIL1-210ENST00000508639 TOMM70O94826 608 aa14.19□□□□□ -0.14
SIL1-210ENST00000508639 TBC1D2BQ9UPU7 963 aa14.19□□□□□ -0.14
SIL1-210ENST00000508639 USP16Q9Y5T5 823 aa14.19□□□□□ -0.14
SIL1-210ENST00000508639 PRKAR2BP31323 418 aa14.18□□□□□ -0.14
SIL1-210ENST00000508639 HTRA3P83110 453 aa14.18□□□□□ -0.14
SIL1-210ENST00000508639 RNF181Q9P0P0 153 aa14.18□□□□□ -0.14
SIL1-210ENST00000508639 NFKBIEO00221 500 aa14.17□□□□□ -0.14
SIL1-210ENST00000508639 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
SIL1-210ENST00000508639 PIP4K2AP48426 406 aaPredicted RBP14.17□□□□□ -0.14
SIL1-210ENST00000508639 BICDL1Q6ZP65 573 aa14.17□□□□□ -0.14
SIL1-210ENST00000508639 COL11A2P13942 1736 aaPredicted RBP14.16□□□□□ -0.14
SIL1-210ENST00000508639 POTECB2RU33 542 aa14.16□□□□□ -0.14
SIL1-210ENST00000508639 CAMTA2O94983 1202 aa14.16□□□□□ -0.14
SIL1-210ENST00000508639 DCTN1Q14203 1278 aa14.16□□□□□ -0.14
SIL1-210ENST00000508639 GAS2L2Q8NHY3 880 aa14.16□□□□□ -0.14
SIL1-210ENST00000508639 RRAGCQ9HB90 399 aa14.16□□□□□ -0.14
SIL1-210ENST00000508639 SCN7AQ01118 1682 aa14.16□□□□□ -0.14
SIL1-210ENST00000508639 PCNTO95613 3336 aa14.16□□□□□ -0.14
SIL1-210ENST00000508639 PRR5LQ6MZQ0 368 aa14.15□□□□□ -0.14
SIL1-210ENST00000508639 C2CD5Q86YS7 1000 aa14.15□□□□□ -0.14
SIL1-210ENST00000508639 SLX4Q8IY92 1834 aa14.15□□□□□ -0.14
SIL1-210ENST00000508639 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
SIL1-210ENST00000508639 STARD3NLO95772 234 aa14.14□□□□□ -0.15
SIL1-210ENST00000508639 IL6STP40189 918 aaPredicted RBP14.14□□□□□ -0.15
SIL1-210ENST00000508639 TEFQ10587 303 aa14.14□□□□□ -0.15
SIL1-210ENST00000508639 IFFO2Q5TF58 517 aa14.14□□□□□ -0.15
SIL1-210ENST00000508639 NBPF10Q6P3W6 841 aaKnown RBP14.14□□□□□ -0.15
SIL1-210ENST00000508639 MCM10Q7L590 875 aa14.14□□□□□ -0.15
SIL1-210ENST00000508639 TTC5Q8N0Z6 440 aa14.14□□□□□ -0.15
SIL1-210ENST00000508639 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
SIL1-210ENST00000508639 RBM46Q8TBY0 533 aaKnown RBP14.14□□□□□ -0.15
SIL1-210ENST00000508639 FER1L6Q2WGJ9 1857 aa14.14□□□□□ -0.15
SIL1-210ENST00000508639 TTLL6Q8N841 843 aa14.13□□□□□ -0.15
SIL1-210ENST00000508639 FMNL2Q96PY5 1086 aa14.13□□□□□ -0.15
SIL1-210ENST00000508639 BCORQ6W2J9 1755 aa14.13□□□□□ -0.15
SIL1-210ENST00000508639 BTBD11A6QL63 1104 aa14.12□□□□□ -0.15
SIL1-210ENST00000508639 APLP1P51693 650 aa14.12□□□□□ -0.15
SIL1-210ENST00000508639 WDR90Q96KV7 1748 aa14.12□□□□□ -0.15
SIL1-210ENST00000508639 A0A087WZG4 1122 aa14.11□□□□□ -0.15
SIL1-210ENST00000508639 BRIP1Q9BX63 1249 aa14.11□□□□□ -0.15
SIL1-210ENST00000508639 TEX13AQ9BXU3 409 aaPredicted RBP14.11□□□□□ -0.15
SIL1-210ENST00000508639 MIS18AQ9NYP9 233 aa14.11□□□□□ -0.15
SIL1-210ENST00000508639 DLG5Q8TDM6 1919 aa14.11□□□□□ -0.15
SIL1-210ENST00000508639 DICER1Q9UPY3 1922 aaKnown RBP14.11□□□□□ -0.15
SIL1-210ENST00000508639 H0YIN7 160 aa14.1□□□□□ -0.15
SIL1-210ENST00000508639 LMNB1P20700 586 aa14.1□□□□□ -0.15
SIL1-210ENST00000508639 C7orf43Q8WVR3 580 aa14.1□□□□□ -0.15
SIL1-210ENST00000508639 ZNF330Q9Y3S2 320 aaPredicted RBP14.1□□□□□ -0.15
SIL1-210ENST00000508639 TNRC6CQ9HCJ0 1690 aaKnown RBP14.1□□□□□ -0.15
SIL1-210ENST00000508639 GLTPD2A6NH11 291 aa14.09□□□□□ -0.15
SIL1-210ENST00000508639 C21orf2O43822 256 aa14.09□□□□□ -0.15
SIL1-210ENST00000508639 U2AF1L5P0DN76 240 aaPredicted RBP14.09□□□□□ -0.15
SIL1-210ENST00000508639 U2AF1Q01081 240 aaKnown RBP eCLIP14.09□□□□□ -0.15
SIL1-210ENST00000508639 PLEKHF1Q96S99 279 aa14.09□□□□□ -0.15
SIL1-210ENST00000508639 ZNF219Q9P2Y4 722 aaPredicted RBP14.09□□□□□ -0.15
SIL1-210ENST00000508639 CACNA1SQ13698 1873 aa14.09□□□□□ -0.15
SIL1-210ENST00000508639 TIAM2Q8IVF5 1701 aa14.08□□□□□ -0.16
SIL1-210ENST00000508639 SRGNP10124 158 aa14.08□□□□□ -0.16
SIL1-210ENST00000508639 HLFQ16534 295 aa14.08□□□□□ -0.16
SIL1-210ENST00000508639 DZIP3Q86Y13 1208 aaKnown RBP14.08□□□□□ -0.16
SIL1-210ENST00000508639 ZNF622Q969S3 477 aaKnown RBP eCLIP14.08□□□□□ -0.162e-6■■■□□ 14.6
SIL1-210ENST00000508639 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms