RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CHRNA5P30532 468 aa13□□□□□ -0.33
NEDD9-211ENST00000508546 WBP1LQ9NX94 342 aa13□□□□□ -0.33
NEDD9-211ENST00000508546 AFDNP55196 1824 aaKnown RBP12.99□□□□□ -0.33
NEDD9-211ENST00000508546 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
NEDD9-211ENST00000508546 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
NEDD9-211ENST00000508546 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
NEDD9-211ENST00000508546 VEGFBP49765 207 aa12.99□□□□□ -0.33
NEDD9-211ENST00000508546 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
NEDD9-211ENST00000508546 PLEKHO1Q53GL0 409 aaPredicted RBP12.98□□□□□ -0.33
NEDD9-211ENST00000508546 LMNB1P20700 586 aa12.97□□□□□ -0.33
NEDD9-211ENST00000508546 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
NEDD9-211ENST00000508546 CABP4P57796 275 aa12.97□□□□□ -0.33
NEDD9-211ENST00000508546 DDR1Q08345 913 aa12.97□□□□□ -0.33
NEDD9-211ENST00000508546 FKBP8Q14318 412 aa12.97□□□□□ -0.33
NEDD9-211ENST00000508546 AMOTQ4VCS5 1084 aa12.97□□□□□ -0.33
NEDD9-211ENST00000508546 NRXN2Q9P2S2 1712 aa12.96□□□□□ -0.33
NEDD9-211ENST00000508546 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.33
NEDD9-211ENST00000508546 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
NEDD9-211ENST00000508546 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.33
NEDD9-211ENST00000508546 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
NEDD9-211ENST00000508546 PASKQ96RG2 1323 aa12.95□□□□□ -0.34
NEDD9-211ENST00000508546 POLRMTO00411 1230 aaKnown RBP12.95□□□□□ -0.34
NEDD9-211ENST00000508546 PTCD1O75127 700 aaKnown RBP12.95□□□□□ -0.34
NEDD9-211ENST00000508546 TM4SF1P30408 202 aa12.95□□□□□ -0.34
NEDD9-211ENST00000508546 LTBP1Q14766 1721 aa12.95□□□□□ -0.34
NEDD9-211ENST00000508546 MTHFSP49914 203 aa12.94□□□□□ -0.34
NEDD9-211ENST00000508546 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
NEDD9-211ENST00000508546 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
NEDD9-211ENST00000508546 INTS5Q6P9B9 1019 aaKnown RBP12.93□□□□□ -0.34
NEDD9-211ENST00000508546 NFATC2IPQ8NCF5 419 aa12.93□□□□□ -0.34
NEDD9-211ENST00000508546 NFKBIEO00221 500 aa12.92□□□□□ -0.34
NEDD9-211ENST00000508546 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
NEDD9-211ENST00000508546 ZPR1O75312 459 aa12.91□□□□□ -0.34
NEDD9-211ENST00000508546 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
NEDD9-211ENST00000508546 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
NEDD9-211ENST00000508546 USPL1Q5W0Q7 1092 aa12.9□□□□□ -0.34
NEDD9-211ENST00000508546 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
NEDD9-211ENST00000508546 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
NEDD9-211ENST00000508546 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
NEDD9-211ENST00000508546 MRC1P22897 1456 aa12.89□□□□□ -0.35
NEDD9-211ENST00000508546 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
NEDD9-211ENST00000508546 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
NEDD9-211ENST00000508546 SCN4AP35499 1836 aa12.88□□□□□ -0.35
NEDD9-211ENST00000508546 RASSF10A6NK89 507 aa12.88□□□□□ -0.35
NEDD9-211ENST00000508546 NFIXQ14938 502 aa12.88□□□□□ -0.35
NEDD9-211ENST00000508546 DNAJC10Q8IXB1 793 aa12.88□□□□□ -0.35
NEDD9-211ENST00000508546 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
NEDD9-211ENST00000508546 NARFQ9UHQ1 456 aa12.88□□□□□ -0.35
NEDD9-211ENST00000508546 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
NEDD9-211ENST00000508546 COL15A1P39059 1388 aa12.87□□□□□ -0.35
NEDD9-211ENST00000508546 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
NEDD9-211ENST00000508546 AKAP4Q5JQC9 854 aa12.87□□□□□ -0.35
NEDD9-211ENST00000508546 SULT6B1Q6IMI4 303 aa12.87□□□□□ -0.35
NEDD9-211ENST00000508546 SLC52A2Q9HAB3 445 aa12.87□□□□□ -0.35
NEDD9-211ENST00000508546 CARMIL3Q8ND23 1372 aa12.86□□□□□ -0.35
NEDD9-211ENST00000508546 SERPINB2P05120 415 aa12.86□□□□□ -0.35
NEDD9-211ENST00000508546 MAP2K1Q02750 393 aaPredicted RBP12.86□□□□□ -0.35
NEDD9-211ENST00000508546 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
NEDD9-211ENST00000508546 LDHDQ86WU2 507 aa12.86□□□□□ -0.35
NEDD9-211ENST00000508546 MCOLN1Q9GZU1 580 aa12.86□□□□□ -0.35
NEDD9-211ENST00000508546 TIMELESSQ9UNS1 1208 aa12.86□□□□□ -0.35
NEDD9-211ENST00000508546 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
NEDD9-211ENST00000508546 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
NEDD9-211ENST00000508546 ITGBL1O95965 494 aaPredicted RBP12.85□□□□□ -0.35
NEDD9-211ENST00000508546 POLR3GLQ9BT43 218 aa12.85□□□□□ -0.35
NEDD9-211ENST00000508546 PANK3Q9H999 370 aa12.85□□□□□ -0.35
NEDD9-211ENST00000508546 BCL2L12Q9HB09 334 aa12.85□□□□□ -0.35
NEDD9-211ENST00000508546 TSKSQ9UJT2 592 aa12.85□□□□□ -0.35
NEDD9-211ENST00000508546 CACNA1SQ13698 1873 aa12.85□□□□□ -0.35
NEDD9-211ENST00000508546 CASP8AP2Q9UKL3 1982 aa12.84□□□□□ -0.35
NEDD9-211ENST00000508546 H0YIN7 160 aa12.84□□□□□ -0.35
NEDD9-211ENST00000508546 IL13P35225 146 aa12.84□□□□□ -0.35
NEDD9-211ENST00000508546 ERFEQ4G0M1 354 aa12.84□□□□□ -0.35
NEDD9-211ENST00000508546 C2CD5Q86YS7 1000 aa12.84□□□□□ -0.35
NEDD9-211ENST00000508546 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
NEDD9-211ENST00000508546 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
NEDD9-211ENST00000508546 ZBTB1Q9Y2K1 713 aa12.84□□□□□ -0.35
NEDD9-211ENST00000508546 ARFGEF2Q9Y6D5 1785 aa12.84□□□□□ -0.35
NEDD9-211ENST00000508546 RNMTO43148 476 aaKnown RBP12.83□□□□□ -0.36
NEDD9-211ENST00000508546 MORC1Q86VD1 984 aa12.83□□□□□ -0.36
NEDD9-211ENST00000508546 LGR6Q9HBX8 967 aa12.83□□□□□ -0.36
NEDD9-211ENST00000508546 SCN7AQ01118 1682 aa12.83□□□□□ -0.36
NEDD9-211ENST00000508546 SLC39A6Q13433 755 aa12.82□□□□□ -0.36
NEDD9-211ENST00000508546 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
NEDD9-211ENST00000508546 PRPF38BQ5VTL8 546 aaKnown RBP12.82□□□□□ -0.36
NEDD9-211ENST00000508546 TAF1DQ9H5J8 278 aaPredicted RBP12.82□□□□□ -0.36
NEDD9-211ENST00000508546 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
NEDD9-211ENST00000508546 LTBP3Q9NS15 1303 aa12.81□□□□□ -0.36
NEDD9-211ENST00000508546 SIPA1L3O60292 1781 aaPredicted RBP12.8□□□□□ -0.36
NEDD9-211ENST00000508546 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
NEDD9-211ENST00000508546 L3MBTL3Q96JM7 780 aaPredicted RBP12.8□□□□□ -0.36
NEDD9-211ENST00000508546 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
NEDD9-211ENST00000508546 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
NEDD9-211ENST00000508546 A0A087WZG4 1122 aa12.79□□□□□ -0.36
NEDD9-211ENST00000508546 IQCA1LA6NCM1 817 aa12.79□□□□□ -0.36
NEDD9-211ENST00000508546 STARD3NLO95772 234 aa12.79□□□□□ -0.36
NEDD9-211ENST00000508546 PDE6BP35913 854 aa12.79□□□□□ -0.36
NEDD9-211ENST00000508546 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
NEDD9-211ENST00000508546 C21orf2O43822 256 aa12.78□□□□□ -0.36
NEDD9-211ENST00000508546 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms