RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 USP17L13C9JLJ4 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 USP17L12C9JPN9 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 USP17L11C9JVI0 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 USP17L21D6R901 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 USP17L18D6R9N7 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 USP17L22D6RA61 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 USP17L17D6RBQ6 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 USP17L19D6RCP7 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 USP17L20D6RJB6 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 USP17L24Q0WX57 530 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 LBRQ14739 615 aaKnown RBP11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 FOXR1Q6PIV2 292 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 AIDAQ96BJ3 306 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 TSPAN10Q9H1Z9 355 aaPredicted RBP11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 PARP3Q9Y6F1 533 aa11.08□□□□□ -0.64
TOPBP1-206ENST00000508524 SLURP2P0DP57 97 aa11.07□□□□□ -0.64
TOPBP1-206ENST00000508524 CSB-PGBD3P0DP91 1061 aa11.07□□□□□ -0.64
TOPBP1-206ENST00000508524 TEAD4Q15561 434 aa11.07□□□□□ -0.64
TOPBP1-206ENST00000508524 PGBD3Q8N328 593 aa11.07□□□□□ -0.64
TOPBP1-206ENST00000508524 ZDHHC3Q9NYG2 299 aa11.07□□□□□ -0.64
TOPBP1-206ENST00000508524 SEC13P55735 322 aa11.06□□□□□ -0.64
TOPBP1-206ENST00000508524 DPYDQ12882 1025 aa11.06□□□□□ -0.64
TOPBP1-206ENST00000508524 NBPF1Q3BBV0 1214 aa11.06□□□□□ -0.64
TOPBP1-206ENST00000508524 L3MBTL2Q969R5 705 aa11.06□□□□□ -0.64
TOPBP1-206ENST00000508524 TRERF1Q96PN7 1200 aa11.06□□□□□ -0.64
TOPBP1-206ENST00000508524 RBM19Q9Y4C8 960 aaKnown RBP11.06□□□□□ -0.64
TOPBP1-206ENST00000508524 NOS2P35228 1153 aa11.05□□□□□ -0.64
TOPBP1-206ENST00000508524 TXLNAP40222 546 aa11.05□□□□□ -0.64
TOPBP1-206ENST00000508524 EFHC2Q5JST6 749 aa11.05□□□□□ -0.64
TOPBP1-206ENST00000508524 MBIPQ9NS73 344 aa11.05□□□□□ -0.64
TOPBP1-206ENST00000508524 RFX1P22670 979 aa11.04□□□□□ -0.64
TOPBP1-206ENST00000508524 SRSF11Q05519 484 aaKnown RBP11.04□□□□□ -0.64
TOPBP1-206ENST00000508524 SH3PXD2AQ5TCZ1 1133 aa11.04□□□□□ -0.64
TOPBP1-206ENST00000508524 POTEAQ6S8J7 498 aa11.04□□□□□ -0.64
TOPBP1-206ENST00000508524 ANKMY2Q8IV38 441 aa11.04□□□□□ -0.64
TOPBP1-206ENST00000508524 ARXQ96QS3 562 aa11.04□□□□□ -0.64
TOPBP1-206ENST00000508524 EML1O00423 815 aa11.03□□□□□ -0.64
TOPBP1-206ENST00000508524 C21orf2O43822 256 aa11.03□□□□□ -0.64
TOPBP1-206ENST00000508524 ADAMTS2O95450 1211 aa11.03□□□□□ -0.64
TOPBP1-206ENST00000508524 CFHR5Q9BXR6 569 aa11.03□□□□□ -0.64
TOPBP1-206ENST00000508524 NDFIP2Q9NV92 336 aa11.03□□□□□ -0.64
TOPBP1-206ENST00000508524 ARID3CA6NKF2 412 aa11.02□□□□□ -0.65
TOPBP1-206ENST00000508524 TATP17735 454 aaPredicted RBP11.02□□□□□ -0.65
TOPBP1-206ENST00000508524 PSMA6P60900 246 aaKnown RBP11.02□□□□□ -0.65
TOPBP1-206ENST00000508524 CDCA8Q53HL2 280 aa11.02□□□□□ -0.65
TOPBP1-206ENST00000508524 WHAMMQ8TF30 809 aa11.02□□□□□ -0.65
TOPBP1-206ENST00000508524 ZIC5Q96T25 663 aa11.02□□□□□ -0.65
TOPBP1-206ENST00000508524 ZNF232Q9UNY5 417 aa11.02□□□□□ -0.65
TOPBP1-206ENST00000508524 A0A1W2PNR3 127 aa11.01□□□□□ -0.65
TOPBP1-206ENST00000508524 SERTM1A2A2V5 107 aa11.01□□□□□ -0.65
TOPBP1-206ENST00000508524 ARSJQ5FYB0 599 aaPredicted RBP11.01□□□□□ -0.65
TOPBP1-206ENST00000508524 ZNF385CQ66K41 422 aaPredicted RBP11.01□□□□□ -0.65
TOPBP1-206ENST00000508524 NLRP8Q86W28 1048 aa11.01□□□□□ -0.65
TOPBP1-206ENST00000508524 BNIP3LO60238 219 aa11□□□□□ -0.65
TOPBP1-206ENST00000508524 HIRAP54198 1017 aaPredicted RBP11□□□□□ -0.65
TOPBP1-206ENST00000508524 SRPK2P78362 688 aaKnown RBP11□□□□□ -0.65
TOPBP1-206ENST00000508524 C7orf43Q8WVR3 580 aa11□□□□□ -0.65
TOPBP1-206ENST00000508524 ZCCHC2Q9C0B9 1178 aaKnown RBP11□□□□□ -0.65
TOPBP1-206ENST00000508524 IGF1RP08069 1367 aa11□□□□□ -0.65
TOPBP1-206ENST00000508524 FAM181BA6NEQ2 426 aa10.99□□□□□ -0.65
TOPBP1-206ENST00000508524 MX2P20592 715 aa10.99□□□□□ -0.65
TOPBP1-206ENST00000508524 C14orf37Q86TY3 774 aa10.99□□□□□ -0.65
TOPBP1-206ENST00000508524 ABHD17AQ96GS6 310 aa10.99□□□□□ -0.65
TOPBP1-206ENST00000508524 ATXN7L1Q9ULK2 861 aaPredicted RBP10.99□□□□□ -0.65
TOPBP1-206ENST00000508524 PHF24Q9UPV7 400 aa10.99□□□□□ -0.65
TOPBP1-206ENST00000508524 PPP1R12BO60237 982 aaPredicted RBP10.98□□□□□ -0.65
TOPBP1-206ENST00000508524 LGR5O75473 907 aa10.98□□□□□ -0.65
TOPBP1-206ENST00000508524 FIGNL1Q6PIW4 674 aa10.98□□□□□ -0.65
TOPBP1-206ENST00000508524 KLRG1Q96E93 195 aa10.98□□□□□ -0.65
TOPBP1-206ENST00000508524 ATAD2Q6PL18 1390 aa10.98□□□□□ -0.65
TOPBP1-206ENST00000508524 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.97□□□□□ -0.65
TOPBP1-206ENST00000508524 LYPD4Q6UWN0 246 aa10.97□□□□□ -0.65
TOPBP1-206ENST00000508524 SCG3Q8WXD2 468 aaKnown RBP10.97□□□□□ -0.65
TOPBP1-206ENST00000508524 CCDC97Q96F63 343 aaPredicted RBP10.97□□□□□ -0.65
TOPBP1-206ENST00000508524 HINFPQ9BQA5 517 aa10.97□□□□□ -0.65
TOPBP1-206ENST00000508524 HCN2Q9UL51 889 aa10.97□□□□□ -0.65
TOPBP1-206ENST00000508524 PCDHGC4Q9Y5F7 938 aa10.97□□□□□ -0.65
TOPBP1-206ENST00000508524 BICDL1Q6ZP65 573 aa10.96□□□□□ -0.65
TOPBP1-206ENST00000508524 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
TOPBP1-206ENST00000508524 SVOPQ8N4V2 548 aa10.96□□□□□ -0.65
TOPBP1-206ENST00000508524 C2orf49Q9BVC5 232 aaPredicted RBP10.96□□□□□ -0.65
TOPBP1-206ENST00000508524 ATXN7O15265 892 aaPredicted RBP10.95□□□□□ -0.66
TOPBP1-206ENST00000508524 GAS2L2Q8NHY3 880 aa10.95□□□□□ -0.66
TOPBP1-206ENST00000508524 SERPINA10Q9UK55 444 aa10.95□□□□□ -0.66
TOPBP1-206ENST00000508524 ZMIZ1Q9ULJ6 1067 aa10.95□□□□□ -0.66
TOPBP1-206ENST00000508524 NOVA2Q9UNW9 492 aaKnown RBP10.95□□□□□ -0.66
TOPBP1-206ENST00000508524 CHMP3Q9Y3E7 222 aa10.95□□□□□ -0.66
TOPBP1-206ENST00000508524 HCN4Q9Y3Q4 1203 aa10.95□□□□□ -0.66
TOPBP1-206ENST00000508524 ARHGEF15O94989 841 aa10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 CELA2BP08218 269 aaPredicted RBP10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 FGFR3P22607 806 aa10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 SAMD5Q5TGI4 173 aa10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 C1orf53Q5VUE5 145 aa10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 FAM200AQ8TCP9 573 aa10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 ACDQ96AP0 544 aa10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 PHACTR1Q9C0D0 580 aa10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 C1orf115Q9H7X2 142 aa10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 NSFL1CQ9UNZ2 370 aaKnown RBP10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 GPC6Q9Y625 555 aaPredicted RBP10.94□□□□□ -0.66
TOPBP1-206ENST00000508524 DCDC2BA2VCK2 349 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms