RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
DDR1-263ENST00000508317 NARFQ9UHQ1 456 aa21.88■■□□□ 1.09
DDR1-263ENST00000508317 SOS1Q07889 1333 aaPredicted RBP21.87■■□□□ 1.09
DDR1-263ENST00000508317 NPHP1O15259 732 aa21.87■■□□□ 1.09
DDR1-263ENST00000508317 ZNF330Q9Y3S2 320 aaPredicted RBP21.87■■□□□ 1.09
DDR1-263ENST00000508317 HTRA3P83110 453 aa21.86■■□□□ 1.09
DDR1-263ENST00000508317 COL15A1P39059 1388 aa21.86■■□□□ 1.09
DDR1-263ENST00000508317 U2AF1L5P0DN76 240 aaPredicted RBP21.85■■□□□ 1.09
DDR1-263ENST00000508317 U2AF1Q01081 240 aaKnown RBP eCLIP21.85■■□□□ 1.09
DDR1-263ENST00000508317 C16orf71Q8IYS4 520 aaPredicted RBP21.85■■□□□ 1.09
DDR1-263ENST00000508317 FMNL2Q96PY5 1086 aa21.85■■□□□ 1.09
DDR1-263ENST00000508317 ZNF790Q6PG37 636 aa21.84■■□□□ 1.09
DDR1-263ENST00000508317 POLRMTO00411 1230 aaKnown RBP21.83■■□□□ 1.09
DDR1-263ENST00000508317 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
DDR1-263ENST00000508317 DDR1Q08345 913 aa21.83■■□□□ 1.09
DDR1-263ENST00000508317 ZBTB1Q9Y2K1 713 aa21.83■■□□□ 1.09
DDR1-263ENST00000508317 BTBD11A6QL63 1104 aa21.82■■□□□ 1.08
DDR1-263ENST00000508317 CAPN15O75808 1086 aa21.82■■□□□ 1.08
DDR1-263ENST00000508317 TM4SF1P30408 202 aa21.82■■□□□ 1.08
DDR1-263ENST00000508317 C4AP0C0L4 1744 aa21.82■■□□□ 1.08
DDR1-263ENST00000508317 MRC1P22897 1456 aa21.82■■□□□ 1.08
DDR1-263ENST00000508317 TOMM70O94826 608 aa21.81■■□□□ 1.08
DDR1-263ENST00000508317 SERPINB2P05120 415 aa21.81■■□□□ 1.08
DDR1-263ENST00000508317 NMRK2Q9NPI5 230 aa21.81■■□□□ 1.08
DDR1-263ENST00000508317 WDR90Q96KV7 1748 aa21.8■■□□□ 1.08
DDR1-263ENST00000508317 KIAA1551Q9HCM1 1747 aa21.8■■□□□ 1.08
DDR1-263ENST00000508317 H0YIN7 160 aa21.8■■□□□ 1.08
DDR1-263ENST00000508317 NFIXQ14938 502 aa21.8■■□□□ 1.08
DDR1-263ENST00000508317 C9orf131Q5VYM1 1079 aa21.8■■□□□ 1.08
DDR1-263ENST00000508317 BICDL1Q6ZP65 573 aa21.8■■□□□ 1.08
DDR1-263ENST00000508317 PDZRN3Q9UPQ7 1066 aa21.8■■□□□ 1.08
DDR1-263ENST00000508317 COL5A3P25940 1745 aaPredicted RBP21.8■■□□□ 1.08
DDR1-263ENST00000508317 KDM2BQ8NHM5 1336 aa21.8■■□□□ 1.08
DDR1-263ENST00000508317 CHRNA5P30532 468 aa21.79■■□□□ 1.08
DDR1-263ENST00000508317 IL17REQ8NFR9 667 aa21.79■■□□□ 1.08
DDR1-263ENST00000508317 ZNF496Q96IT1 587 aaPredicted RBP21.79■■□□□ 1.08
DDR1-263ENST00000508317 HEG1Q9ULI3 1381 aa21.78■■□□□ 1.08
DDR1-263ENST00000508317 RNF181Q9P0P0 153 aa21.78■■□□□ 1.08
DDR1-263ENST00000508317 SCN11AQ9UI33 1791 aa21.78■■□□□ 1.08
DDR1-263ENST00000508317 IL6STP40189 918 aaPredicted RBP21.77■■□□□ 1.08
DDR1-263ENST00000508317 TTLL6Q8N841 843 aa21.77■■□□□ 1.08
DDR1-263ENST00000508317 JMYQ8N9B5 988 aa21.77■■□□□ 1.08
DDR1-263ENST00000508317 PNNQ9H307 717 aaKnown RBP21.77■■□□□ 1.08
DDR1-263ENST00000508317 KCNA3P22001 575 aa21.76■■□□□ 1.07
DDR1-263ENST00000508317 PPP2R1AP30153 589 aa21.76■■□□□ 1.07
DDR1-263ENST00000508317 PDE6BP35913 854 aa21.76■■□□□ 1.07
DDR1-263ENST00000508317 C2CD5Q86YS7 1000 aa21.76■■□□□ 1.07
DDR1-263ENST00000508317 EIF5P55010 431 aaKnown RBP21.75■■□□□ 1.07
DDR1-263ENST00000508317 KLRG1Q96E93 195 aa21.75■■□□□ 1.07
DDR1-263ENST00000508317 SETDB2Q96T68 719 aa21.75■■□□□ 1.07
DDR1-263ENST00000508317 RSPH6AQ9H0K4 717 aa21.75■■□□□ 1.07
DDR1-263ENST00000508317 HTATSF1O43719 755 aaKnown RBP21.74■■□□□ 1.07
DDR1-263ENST00000508317 ZNF652Q9Y2D9 606 aa21.74■■□□□ 1.07
DDR1-263ENST00000508317 KCPQ6ZWJ8 1503 aa21.74■■□□□ 1.07
DDR1-263ENST00000508317 SNRPA1P09661 255 aaKnown RBP21.73■■□□□ 1.07
DDR1-263ENST00000508317 ST5P78524 1137 aa21.73■■□□□ 1.07
DDR1-263ENST00000508317 PHACTR3Q96KR7 559 aa21.73■■□□□ 1.07
DDR1-263ENST00000508317 TBC1D2BQ9UPU7 963 aa21.73■■□□□ 1.07
DDR1-263ENST00000508317 TJP1Q07157 1748 aa21.72■■□□□ 1.07
DDR1-263ENST00000508317 COL3A1P02461 1466 aaPredicted RBP21.72■■□□□ 1.07
DDR1-263ENST00000508317 ZNF622Q969S3 477 aaKnown RBP eCLIP21.72■■□□□ 1.07
DDR1-263ENST00000508317 CARMIL3Q8ND23 1372 aa21.71■■□□□ 1.07
DDR1-263ENST00000508317 MYH14Q7Z406 1995 aaKnown RBP21.7■■□□□ 1.07
DDR1-263ENST00000508317 PRELPP51888 382 aa21.7■■□□□ 1.06
DDR1-263ENST00000508317 DZIP3Q86Y13 1208 aaKnown RBP21.7■■□□□ 1.06
DDR1-263ENST00000508317 CNBD1Q8NA66 436 aa21.7■■□□□ 1.06
DDR1-263ENST00000508317 PNISRQ8TF01 805 aaKnown RBP21.7■■□□□ 1.06
DDR1-263ENST00000508317 BRIP1Q9BX63 1249 aa21.7■■□□□ 1.06
DDR1-263ENST00000508317 KIF13BQ9NQT8 1826 aa21.7■■□□□ 1.06
DDR1-263ENST00000508317 CEMIPQ8WUJ3 1361 aa21.7■■□□□ 1.06
DDR1-263ENST00000508317 A1BGP04217 495 aa21.69■■□□□ 1.06
DDR1-263ENST00000508317 LMNB1P20700 586 aa21.69■■□□□ 1.06
DDR1-263ENST00000508317 TBC1D9BQ66K14 1250 aa21.69■■□□□ 1.06
DDR1-263ENST00000508317 MCM10Q7L590 875 aa21.69■■□□□ 1.06
DDR1-263ENST00000508317 TNS4Q8IZW8 715 aa21.69■■□□□ 1.06
DDR1-263ENST00000508317 RBM46Q8TBY0 533 aaKnown RBP21.69■■□□□ 1.06
DDR1-263ENST00000508317 BCL2L12Q9HB09 334 aa21.69■■□□□ 1.06
DDR1-263ENST00000508317 ZC3H4Q9UPT8 1303 aaKnown RBP21.69■■□□□ 1.06
DDR1-263ENST00000508317 N4BP2Q86UW6 1770 aaPredicted RBP21.69■■□□□ 1.06
DDR1-263ENST00000508317 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
DDR1-263ENST00000508317 MAPK8IP3Q9UPT6 1336 aa21.68■■□□□ 1.06
DDR1-263ENST00000508317 SOGA3Q5TF21 947 aa21.66■■□□□ 1.06
DDR1-263ENST00000508317 DPY19L2Q6NUT2 758 aa21.66■■□□□ 1.06
DDR1-263ENST00000508317 CLEC4GQ6UXB4 293 aa21.66■■□□□ 1.06
DDR1-263ENST00000508317 NBPF5PQ86XG9 351 aaPredicted RBP21.66■■□□□ 1.06
DDR1-263ENST00000508317 CNKSR1Q969H4 720 aa21.66■■□□□ 1.06
DDR1-263ENST00000508317 GTF2E1P29083 439 aaPredicted RBP21.65■■□□□ 1.06
DDR1-263ENST00000508317 ADAMTS7Q9UKP4 1686 aa21.64■■□□□ 1.05
DDR1-263ENST00000508317 FSTL1Q12841 308 aa21.64■■□□□ 1.05
DDR1-263ENST00000508317 PRR5LQ6MZQ0 368 aa21.63■■□□□ 1.05
DDR1-263ENST00000508317 TPTE2Q6XPS3 522 aa21.63■■□□□ 1.05
DDR1-263ENST00000508317 RRAGCQ9HB90 399 aa21.63■■□□□ 1.05
DDR1-263ENST00000508317 USP16Q9Y5T5 823 aa21.63■■□□□ 1.05
DDR1-263ENST00000508317 KCNQ3O43525 872 aa21.62■■□□□ 1.05
DDR1-263ENST00000508317 CAMTA2O94983 1202 aa21.62■■□□□ 1.05
DDR1-263ENST00000508317 RASSF7Q02833 373 aa21.62■■□□□ 1.05
DDR1-263ENST00000508317 ZNF219Q9P2Y4 722 aaPredicted RBP21.62■■□□□ 1.05
DDR1-263ENST00000508317 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
DDR1-263ENST00000508317 RGL2O15211 777 aa21.6■■□□□ 1.05
DDR1-263ENST00000508317 C21orf2O43822 256 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms