RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 USPL1Q5W0Q7 1092 aa19.06■□□□□ 0.64
RAB28-205ENST00000508274 PARP3Q9Y6F1 533 aa19.06■□□□□ 0.64
RAB28-205ENST00000508274 BRCA1P38398 1863 aaKnown RBP19.06■□□□□ 0.64
RAB28-205ENST00000508274 KCNQ3O43525 872 aa19.06■□□□□ 0.64
RAB28-205ENST00000508274 MCM10Q7L590 875 aa19.06■□□□□ 0.64
RAB28-205ENST00000508274 CANXP27824 592 aaKnown RBP19.05■□□□□ 0.64
RAB28-205ENST00000508274 DCTN1Q14203 1278 aa19.05■□□□□ 0.64
RAB28-205ENST00000508274 PPP4R3CPQ6ZMV5 832 aa19.05■□□□□ 0.64
RAB28-205ENST00000508274 A0A0G2JLW4 131 aa19.04■□□□□ 0.64
RAB28-205ENST00000508274 AFDNP55196 1824 aaKnown RBP19.04■□□□□ 0.64
RAB28-205ENST00000508274 BTBD11A6QL63 1104 aa19.03■□□□□ 0.64
RAB28-205ENST00000508274 ZPR1O75312 459 aa19.03■□□□□ 0.64
RAB28-205ENST00000508274 RTF1Q92541 710 aaKnown RBP19.02■□□□□ 0.64
RAB28-205ENST00000508274 NARFQ9UHQ1 456 aa19.02■□□□□ 0.64
RAB28-205ENST00000508274 POLRMTO00411 1230 aaKnown RBP19.02■□□□□ 0.63
RAB28-205ENST00000508274 STARD3NLO95772 234 aa19.02■□□□□ 0.63
RAB28-205ENST00000508274 DPEP1P16444 411 aa19.02■□□□□ 0.63
RAB28-205ENST00000508274 TM4SF1P30408 202 aa19.02■□□□□ 0.63
RAB28-205ENST00000508274 TGFB2P61812 414 aa19.02■□□□□ 0.63
RAB28-205ENST00000508274 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.63
RAB28-205ENST00000508274 FMNL2Q96PY5 1086 aa19.02■□□□□ 0.63
RAB28-205ENST00000508274 BCL2L12Q9HB09 334 aa19.02■□□□□ 0.63
RAB28-205ENST00000508274 SCN7AQ01118 1682 aa19.01■□□□□ 0.63
RAB28-205ENST00000508274 NRXN2Q9P2S2 1712 aa19■□□□□ 0.63
RAB28-205ENST00000508274 EIF5P55010 431 aaKnown RBP19■□□□□ 0.63
RAB28-205ENST00000508274 POTEDQ86YR6 584 aa19■□□□□ 0.63
RAB28-205ENST00000508274 PRAMEF22A3QJZ6 481 aa18.99■□□□□ 0.63
RAB28-205ENST00000508274 NFIXQ14938 502 aa18.99■□□□□ 0.63
RAB28-205ENST00000508274 PLEKHF1Q96S99 279 aa18.99■□□□□ 0.63
RAB28-205ENST00000508274 BCS1LQ9Y276 419 aa18.99■□□□□ 0.63
RAB28-205ENST00000508274 A1BGP04217 495 aa18.98■□□□□ 0.63
RAB28-205ENST00000508274 KCNA3P22001 575 aa18.98■□□□□ 0.63
RAB28-205ENST00000508274 ZNF330Q9Y3S2 320 aaPredicted RBP18.98■□□□□ 0.63
RAB28-205ENST00000508274 TEX13AQ9BXU3 409 aaPredicted RBP18.98■□□□□ 0.63
RAB28-205ENST00000508274 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
RAB28-205ENST00000508274 ATP10DQ9P241 1426 aa18.97■□□□□ 0.63
RAB28-205ENST00000508274 ADCY9O60503 1353 aa18.97■□□□□ 0.63
RAB28-205ENST00000508274 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
RAB28-205ENST00000508274 PIP4K2AP48426 406 aaPredicted RBP18.97■□□□□ 0.63
RAB28-205ENST00000508274 BCORQ6W2J9 1755 aa18.96■□□□□ 0.63
RAB28-205ENST00000508274 KDM3BQ7LBC6 1761 aa18.96■□□□□ 0.63
RAB28-205ENST00000508274 RALBP1Q15311 655 aa18.96■□□□□ 0.63
RAB28-205ENST00000508274 USP16Q9Y5T5 823 aa18.96■□□□□ 0.63
RAB28-205ENST00000508274 CHRNA5P30532 468 aa18.95■□□□□ 0.62
RAB28-205ENST00000508274 MIS18AQ9NYP9 233 aa18.95■□□□□ 0.62
RAB28-205ENST00000508274 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
RAB28-205ENST00000508274 NEFMP07197 916 aa18.94■□□□□ 0.62
RAB28-205ENST00000508274 IL6STP40189 918 aaPredicted RBP18.94■□□□□ 0.62
RAB28-205ENST00000508274 BICDL1Q6ZP65 573 aa18.94■□□□□ 0.62
RAB28-205ENST00000508274 THUMPD2Q9BTF0 503 aaKnown RBP18.94■□□□□ 0.62
RAB28-205ENST00000508274 LAMB4A4D0S4 1761 aa18.94■□□□□ 0.62
RAB28-205ENST00000508274 A0A087WZG4 1122 aa18.93■□□□□ 0.62
RAB28-205ENST00000508274 NFE2L2Q16236 605 aa18.93■□□□□ 0.62
RAB28-205ENST00000508274 DLEC1Q9Y238 1755 aa18.93■□□□□ 0.62
RAB28-205ENST00000508274 CARMIL3Q8ND23 1372 aa18.93■□□□□ 0.62
RAB28-205ENST00000508274 SERPINB2P05120 415 aa18.93■□□□□ 0.62
RAB28-205ENST00000508274 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
RAB28-205ENST00000508274 TBC1D9BQ66K14 1250 aa18.93■□□□□ 0.62
RAB28-205ENST00000508274 ANKRD31Q8N7Z5 1873 aa18.93■□□□□ 0.62
RAB28-205ENST00000508274 MAPK8IP3Q9UPT6 1336 aa18.92■□□□□ 0.62
RAB28-205ENST00000508274 SNRPA1P09661 255 aaKnown RBP18.92■□□□□ 0.62
RAB28-205ENST00000508274 TAF7Q15545 349 aaPredicted RBP18.92■□□□□ 0.62
RAB28-205ENST00000508274 ZNF526Q8TF50 670 aaPredicted RBP18.92■□□□□ 0.62
RAB28-205ENST00000508274 PIM2Q9P1W9 311 aa18.92■□□□□ 0.62
RAB28-205ENST00000508274 MYBBP1AQ9BQG0 1328 aaKnown RBP18.91■□□□□ 0.62
RAB28-205ENST00000508274 GIGYF1O75420 1035 aaPredicted RBP18.91■□□□□ 0.62
RAB28-205ENST00000508274 CAMTA2O94983 1202 aa18.9■□□□□ 0.62
RAB28-205ENST00000508274 ARHGAP27Q6ZUM4 889 aa18.9■□□□□ 0.62
RAB28-205ENST00000508274 DZIP3Q86Y13 1208 aaKnown RBP18.89■□□□□ 0.62
RAB28-205ENST00000508274 C1QTNF8P60827 252 aa18.89■□□□□ 0.61
RAB28-205ENST00000508274 DALRD3Q5D0E6 543 aaKnown RBP18.89■□□□□ 0.61
RAB28-205ENST00000508274 NPM2Q86SE8 214 aaKnown RBP18.89■□□□□ 0.61
RAB28-205ENST00000508274 COL11A2P13942 1736 aaPredicted RBP18.88■□□□□ 0.61
RAB28-205ENST00000508274 NBPF26B4DH59 902 aa18.88■□□□□ 0.61
RAB28-205ENST00000508274 NBPF10Q6P3W6 841 aaKnown RBP18.88■□□□□ 0.61
RAB28-205ENST00000508274 NBPF15Q8N660 670 aa18.88■□□□□ 0.61
RAB28-205ENST00000508274 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
RAB28-205ENST00000508274 CCDC24Q8N4L8 307 aa18.87■□□□□ 0.61
RAB28-205ENST00000508274 GPBP1L1Q9HC44 474 aaPredicted RBP18.87■□□□□ 0.61
RAB28-205ENST00000508274 SBF1O95248 1867 aa18.85■□□□□ 0.61
RAB28-205ENST00000508274 PRR5LQ6MZQ0 368 aa18.85■□□□□ 0.61
RAB28-205ENST00000508274 CCDC146Q8IYE0 955 aa18.85■□□□□ 0.61
RAB28-205ENST00000508274 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
RAB28-205ENST00000508274 RIPK4P57078 832 aa18.85■□□□□ 0.61
RAB28-205ENST00000508274 EIF4A1P60842 406 aaKnown RBP18.85■□□□□ 0.61
RAB28-205ENST00000508274 C2CD5Q86YS7 1000 aa18.85■□□□□ 0.61
RAB28-205ENST00000508274 CACNA1SQ13698 1873 aa18.84■□□□□ 0.61
RAB28-205ENST00000508274 TMPOP42166 694 aaKnown RBP18.83■□□□□ 0.6
RAB28-205ENST00000508274 SETDB2Q96T68 719 aa18.83■□□□□ 0.6
RAB28-205ENST00000508274 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.6
RAB28-205ENST00000508274 PRKRIP1Q9H875 184 aaPredicted RBP18.82■□□□□ 0.6
RAB28-205ENST00000508274 H0YIN7 160 aa18.81■□□□□ 0.6
RAB28-205ENST00000508274 C9orf131Q5VYM1 1079 aa18.81■□□□□ 0.6
RAB28-205ENST00000508274 CNBD1Q8NA66 436 aa18.81■□□□□ 0.6
RAB28-205ENST00000508274 CEP350Q5VT06 3117 aa18.81■□□□□ 0.6
RAB28-205ENST00000508274 RASSF7Q02833 373 aa18.81■□□□□ 0.6
RAB28-205ENST00000508274 NEUROD2Q15784 382 aa18.81■□□□□ 0.6
RAB28-205ENST00000508274 BRIP1Q9BX63 1249 aa18.81■□□□□ 0.6
RAB28-205ENST00000508274 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
RAB28-205ENST00000508274 NUP98P52948 1817 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms