RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 SCN7AQ01118 1682 aa12.71□□□□□ -0.37
UBE2D3-223ENST00000508249 FOXN1O15353 648 aa12.71□□□□□ -0.37
UBE2D3-223ENST00000508249 RFC4P35249 363 aa12.71□□□□□ -0.37
UBE2D3-223ENST00000508249 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.38
UBE2D3-223ENST00000508249 VEGFAP15692 232 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-223ENST00000508249 TM4SF1P30408 202 aa12.7□□□□□ -0.38
UBE2D3-223ENST00000508249 CRKLP46109 303 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-223ENST00000508249 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
UBE2D3-223ENST00000508249 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
UBE2D3-223ENST00000508249 LMNB1P20700 586 aa12.69□□□□□ -0.38
UBE2D3-223ENST00000508249 RBM42Q9BTD8 480 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-223ENST00000508249 MRC1P22897 1456 aa12.69□□□□□ -0.38
UBE2D3-223ENST00000508249 CNTNAP1P78357 1384 aa12.69□□□□□ -0.38
UBE2D3-223ENST00000508249 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
UBE2D3-223ENST00000508249 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-223ENST00000508249 SCN4AP35499 1836 aa12.67□□□□□ -0.38
UBE2D3-223ENST00000508249 HSPA5P11021 654 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-223ENST00000508249 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-223ENST00000508249 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
UBE2D3-223ENST00000508249 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-223ENST00000508249 BCL2L12Q9HB09 334 aa12.66□□□□□ -0.38
UBE2D3-223ENST00000508249 PRDM10Q9NQV6 1147 aa12.66□□□□□ -0.38
UBE2D3-223ENST00000508249 POLKQ9UBT6 870 aa12.66□□□□□ -0.38
UBE2D3-223ENST00000508249 SLX4Q8IY92 1834 aa12.66□□□□□ -0.38
UBE2D3-223ENST00000508249 SOS1Q07889 1333 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-223ENST00000508249 PASKQ96RG2 1323 aa12.65□□□□□ -0.38
UBE2D3-223ENST00000508249 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
UBE2D3-223ENST00000508249 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-223ENST00000508249 NFIXQ14938 502 aa12.64□□□□□ -0.39
UBE2D3-223ENST00000508249 USPL1Q5W0Q7 1092 aa12.64□□□□□ -0.39
UBE2D3-223ENST00000508249 LTBP1Q14766 1721 aa12.63□□□□□ -0.39
UBE2D3-223ENST00000508249 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-223ENST00000508249 FAM161AQ3B820 660 aa12.63□□□□□ -0.39
UBE2D3-223ENST00000508249 COL15A1P39059 1388 aa12.63□□□□□ -0.39
UBE2D3-223ENST00000508249 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
UBE2D3-223ENST00000508249 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-223ENST00000508249 VEGFBP49765 207 aa12.6□□□□□ -0.39
UBE2D3-223ENST00000508249 ZNF530Q6P9A1 599 aaPredicted RBP12.6□□□□□ -0.39
UBE2D3-223ENST00000508249 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
UBE2D3-223ENST00000508249 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
UBE2D3-223ENST00000508249 TTLL6Q8N841 843 aa12.6□□□□□ -0.39
UBE2D3-223ENST00000508249 WBP1LQ9NX94 342 aa12.6□□□□□ -0.39
UBE2D3-223ENST00000508249 LTBP3Q9NS15 1303 aa12.6□□□□□ -0.39
UBE2D3-223ENST00000508249 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-223ENST00000508249 HSPA8P11142 646 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-223ENST00000508249 CTCFP49711 727 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-223ENST00000508249 CABP4P57796 275 aa12.59□□□□□ -0.39
UBE2D3-223ENST00000508249 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
UBE2D3-223ENST00000508249 ABHD8Q96I13 439 aa12.59□□□□□ -0.39
UBE2D3-223ENST00000508249 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
UBE2D3-223ENST00000508249 ZBTB1Q9Y2K1 713 aa12.59□□□□□ -0.39
UBE2D3-223ENST00000508249 ITGBL1O95965 494 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-223ENST00000508249 SERPINB2P05120 415 aa12.58□□□□□ -0.4
UBE2D3-223ENST00000508249 CYP19A1P11511 503 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-223ENST00000508249 LBX1P52954 281 aa12.58□□□□□ -0.4
UBE2D3-223ENST00000508249 C2CD5Q86YS7 1000 aa12.58□□□□□ -0.4
UBE2D3-223ENST00000508249 DDNO94850 711 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-223ENST00000508249 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
UBE2D3-223ENST00000508249 L3MBTL3Q96JM7 780 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-223ENST00000508249 SNED1Q8TER0 1413 aa12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 TRPM7Q96QT4 1865 aa12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 COL4A5P29400 1685 aa12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 C21orf2O43822 256 aa12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 ZPR1O75312 459 aa12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 RGS19P49795 217 aa12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 MTHFSP49914 203 aa12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 PLEKHO1Q53GL0 409 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
UBE2D3-223ENST00000508249 RASSF10A6NK89 507 aa12.54□□□□□ -0.4
UBE2D3-223ENST00000508249 ZEB1P37275 1124 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-223ENST00000508249 AMOTQ4VCS5 1084 aa12.54□□□□□ -0.4
UBE2D3-223ENST00000508249 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
UBE2D3-223ENST00000508249 LDHDQ86WU2 507 aa12.54□□□□□ -0.4
UBE2D3-223ENST00000508249 TAF1DQ9H5J8 278 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-223ENST00000508249 TMEM88BA6NKF7 163 aa12.53□□□□□ -0.4
UBE2D3-223ENST00000508249 H0YIN7 160 aa12.53□□□□□ -0.4
UBE2D3-223ENST00000508249 SLC39A6Q13433 755 aa12.53□□□□□ -0.4
UBE2D3-223ENST00000508249 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
UBE2D3-223ENST00000508249 KIF7Q2M1P5 1343 aa12.53□□□□□ -0.4
UBE2D3-223ENST00000508249 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
UBE2D3-223ENST00000508249 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-223ENST00000508249 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
UBE2D3-223ENST00000508249 CCDC24Q8N4L8 307 aa12.52□□□□□ -0.41
UBE2D3-223ENST00000508249 TAOK3Q9H2K8 898 aa12.52□□□□□ -0.41
UBE2D3-223ENST00000508249 PANK3Q9H999 370 aa12.52□□□□□ -0.41
UBE2D3-223ENST00000508249 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.41
UBE2D3-223ENST00000508249 LGR6Q9HBX8 967 aa12.52□□□□□ -0.41
UBE2D3-223ENST00000508249 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-223ENST00000508249 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-223ENST00000508249 AIDAQ96BJ3 306 aa12.51□□□□□ -0.41
UBE2D3-223ENST00000508249 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
UBE2D3-223ENST00000508249 C1orf141Q5JVX7 400 aa12.5□□□□□ -0.41
UBE2D3-223ENST00000508249 PRPF40BQ6NWY9 871 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-223ENST00000508249 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
UBE2D3-223ENST00000508249 BRIP1Q9BX63 1249 aa12.5□□□□□ -0.41
UBE2D3-223ENST00000508249 PDE4DIPQ5VU43 2346 aa12.5□□□□□ -0.41
UBE2D3-223ENST00000508249 CASP8AP2Q9UKL3 1982 aa12.49□□□□□ -0.41
UBE2D3-223ENST00000508249 WDR33Q9C0J8 1336 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-223ENST00000508249 MLLT1Q03111 559 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms