RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 QSER1Q2KHR3 1735 aa10.84□□□□□ -0.67
UBE2D3-222ENST00000508238 NPC1L1Q9UHC9 1359 aa10.83□□□□□ -0.68
UBE2D3-222ENST00000508238 POTEFA5A3E0 1075 aa10.83□□□□□ -0.68
UBE2D3-222ENST00000508238 G3V3G9 751 aa10.83□□□□□ -0.68
UBE2D3-222ENST00000508238 PHKG2P15735 406 aa10.83□□□□□ -0.68
UBE2D3-222ENST00000508238 PDE4AP27815 886 aa10.83□□□□□ -0.68
UBE2D3-222ENST00000508238 PIGBQ92521 554 aa10.83□□□□□ -0.68
UBE2D3-222ENST00000508238 BOLA1Q9Y3E2 137 aa10.83□□□□□ -0.68
UBE2D3-222ENST00000508238 PNPLA7Q6ZV29 1317 aa10.83□□□□□ -0.68
UBE2D3-222ENST00000508238 IL13P35225 146 aa10.82□□□□□ -0.68
UBE2D3-222ENST00000508238 KCNQ4P56696 695 aa10.82□□□□□ -0.68
UBE2D3-222ENST00000508238 AMOTQ4VCS5 1084 aa10.82□□□□□ -0.68
UBE2D3-222ENST00000508238 LARP6Q9BRS8 491 aaKnown RBP10.82□□□□□ -0.68
UBE2D3-222ENST00000508238 TFCP2L1Q9NZI6 479 aa10.82□□□□□ -0.68
UBE2D3-222ENST00000508238 KDRP35968 1356 aa10.81□□□□□ -0.68
UBE2D3-222ENST00000508238 PALLDQ8WX93 1383 aa10.81□□□□□ -0.68
UBE2D3-222ENST00000508238 ERVV-2B6SEH9 535 aa10.81□□□□□ -0.68
UBE2D3-222ENST00000508238 HSP90AB1P08238 724 aaKnown RBP10.81□□□□□ -0.68
UBE2D3-222ENST00000508238 PLEKHO1Q53GL0 409 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-222ENST00000508238 L3MBTL3Q96JM7 780 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-222ENST00000508238 TOGARAM1Q9Y4F4 1720 aa10.81□□□□□ -0.68
UBE2D3-222ENST00000508238 MTHFSP49914 203 aa10.8□□□□□ -0.68
UBE2D3-222ENST00000508238 DCAF5Q96JK2 942 aa10.8□□□□□ -0.68
UBE2D3-222ENST00000508238 ARXQ96QS3 562 aa10.8□□□□□ -0.68
UBE2D3-222ENST00000508238 SYT17Q9BSW7 474 aa10.8□□□□□ -0.68
UBE2D3-222ENST00000508238 TMEM121BQ9BXQ6 578 aaPredicted RBP10.8□□□□□ -0.68
UBE2D3-222ENST00000508238 CRISPLD2Q9H0B8 497 aa10.8□□□□□ -0.68
UBE2D3-222ENST00000508238 TMOD3Q9NYL9 352 aa10.8□□□□□ -0.68
UBE2D3-222ENST00000508238 COL24A1Q17RW2 1714 aa10.8□□□□□ -0.68
UBE2D3-222ENST00000508238 TAF1LQ8IZX4 1826 aa10.79□□□□□ -0.68
UBE2D3-222ENST00000508238 MAP3K5Q99683 1374 aa10.79□□□□□ -0.68
UBE2D3-222ENST00000508238 AEBP1Q8IUX7 1158 aa10.79□□□□□ -0.68
UBE2D3-222ENST00000508238 FLAD1Q8NFF5 587 aa10.79□□□□□ -0.68
UBE2D3-222ENST00000508238 LOC102724428A0A0B4J2F2 783 aa10.78□□□□□ -0.68
UBE2D3-222ENST00000508238 POTEMA6NI47 508 aa10.78□□□□□ -0.68
UBE2D3-222ENST00000508238 SIK1P57059 783 aa10.78□□□□□ -0.68
UBE2D3-222ENST00000508238 SULT6B1Q6IMI4 303 aa10.78□□□□□ -0.68
UBE2D3-222ENST00000508238 COL23A1Q86Y22 540 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-222ENST00000508238 FHDC1Q9C0D6 1143 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-222ENST00000508238 ASAP1Q9ULH1 1129 aa10.78□□□□□ -0.68
UBE2D3-222ENST00000508238 TUBGCP6Q96RT7 1819 aa10.78□□□□□ -0.68
UBE2D3-222ENST00000508238 POLD1P28340 1107 aa10.77□□□□□ -0.69
UBE2D3-222ENST00000508238 CC2D1BQ5T0F9 858 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-222ENST00000508238 ZNF530Q6P9A1 599 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-222ENST00000508238 ATG3Q9NT62 314 aa10.77□□□□□ -0.69
UBE2D3-222ENST00000508238 C5P01031 1676 aa10.76□□□□□ -0.69
UBE2D3-222ENST00000508238 UTRNP46939 3433 aa10.76□□□□□ -0.69
UBE2D3-222ENST00000508238 DIAPH1O60610 1272 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-222ENST00000508238 MFSD10Q14728 455 aa10.75□□□□□ -0.69
UBE2D3-222ENST00000508238 C1orf141Q5JVX7 400 aa10.75□□□□□ -0.69
UBE2D3-222ENST00000508238 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
UBE2D3-222ENST00000508238 DDX27Q96GQ7 796 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-222ENST00000508238 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
UBE2D3-222ENST00000508238 KDM6AO15550 1401 aaPredicted RBP10.75□□□□□ -0.69
UBE2D3-222ENST00000508238 SSFA2P28290 1259 aa10.74□□□□□ -0.69
UBE2D3-222ENST00000508238 ATP6V1AP38606 617 aa10.74□□□□□ -0.69
UBE2D3-222ENST00000508238 CABP4P57796 275 aa10.74□□□□□ -0.69
UBE2D3-222ENST00000508238 ITPK1Q13572 414 aa10.74□□□□□ -0.69
UBE2D3-222ENST00000508238 LINC00116Q8NCU8 138 aa10.74□□□□□ -0.69
UBE2D3-222ENST00000508238 KCNV2Q8TDN2 545 aa10.74□□□□□ -0.69
UBE2D3-222ENST00000508238 AK7Q96M32 723 aa10.74□□□□□ -0.69
UBE2D3-222ENST00000508238 C4BP0C0L5 1744 aa10.74□□□□□ -0.69
UBE2D3-222ENST00000508238 UBR3Q6ZT12 1888 aa10.74□□□□□ -0.69
UBE2D3-222ENST00000508238 ZNF831Q5JPB2 1677 aa10.73□□□□□ -0.69
UBE2D3-222ENST00000508238 NBR1Q14596 966 aa10.73□□□□□ -0.69
UBE2D3-222ENST00000508238 E2F4Q16254 413 aa10.73□□□□□ -0.69
UBE2D3-222ENST00000508238 AKAP4Q5JQC9 854 aa10.73□□□□□ -0.69
UBE2D3-222ENST00000508238 RC3H1Q5TC82 1133 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-222ENST00000508238 AMIGO3Q86WK7 504 aa10.73□□□□□ -0.69
UBE2D3-222ENST00000508238 NFATC2IPQ8NCF5 419 aa10.73□□□□□ -0.69
UBE2D3-222ENST00000508238 TMC2Q8TDI7 906 aa10.73□□□□□ -0.69
UBE2D3-222ENST00000508238 SLC4A9Q96Q91 983 aa10.73□□□□□ -0.69
UBE2D3-222ENST00000508238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.72□□□□□ -0.69
UBE2D3-222ENST00000508238 COL3A1P02461 1466 aaPredicted RBP10.71□□□□□ -0.69
UBE2D3-222ENST00000508238 HMOX1P09601 288 aa10.71□□□□□ -0.69
UBE2D3-222ENST00000508238 MAMSTRQ6ZN01 415 aa10.71□□□□□ -0.69
UBE2D3-222ENST00000508238 MYH14Q7Z406 1995 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-222ENST00000508238 SCN11AQ9UI33 1791 aa10.71□□□□□ -0.69
UBE2D3-222ENST00000508238 CHD4Q14839 1912 aa10.7□□□□□ -0.7
UBE2D3-222ENST00000508238 CNTNAP4Q9C0A0 1308 aa10.7□□□□□ -0.7
UBE2D3-222ENST00000508238 GNPATO15228 680 aa10.7□□□□□ -0.7
UBE2D3-222ENST00000508238 POTEJP0CG39 1038 aa10.7□□□□□ -0.7
UBE2D3-222ENST00000508238 YY1P25490 414 aa10.7□□□□□ -0.7
UBE2D3-222ENST00000508238 MTHFSDQ2M296 383 aaKnown RBP10.7□□□□□ -0.7
UBE2D3-222ENST00000508238 PPP1R15BQ5SWA1 713 aa10.7□□□□□ -0.7
UBE2D3-222ENST00000508238 SLC52A2Q9HAB3 445 aa10.7□□□□□ -0.7
UBE2D3-222ENST00000508238 CD2APQ9Y5K6 639 aa10.7□□□□□ -0.7
UBE2D3-222ENST00000508238 GOLGB1Q14789 3259 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-222ENST00000508238 C2orf72A6NCS6 295 aa10.69□□□□□ -0.7
UBE2D3-222ENST00000508238 RNMTO43148 476 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-222ENST00000508238 DSG2Q14126 1118 aa10.69□□□□□ -0.7
UBE2D3-222ENST00000508238 MSL1Q68DK7 614 aa10.69□□□□□ -0.7
UBE2D3-222ENST00000508238 LGR6Q9HBX8 967 aa10.69□□□□□ -0.7
UBE2D3-222ENST00000508238 RPS6KA4O75676 772 aa10.68□□□□□ -0.7
UBE2D3-222ENST00000508238 PHF14O94880 888 aa10.68□□□□□ -0.7
UBE2D3-222ENST00000508238 PPP2R1AP30153 589 aa10.68□□□□□ -0.7
UBE2D3-222ENST00000508238 TRAPPC3LQ5T215 181 aa10.68□□□□□ -0.7
UBE2D3-222ENST00000508238 SMIM5Q71RC9 77 aa10.68□□□□□ -0.7
UBE2D3-222ENST00000508238 CFAP53Q96M91 514 aa10.68□□□□□ -0.7
UBE2D3-222ENST00000508238 RTCBQ9Y3I0 505 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms