RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ALDH8A1Q9H2A2 487 aaPredicted RBP9.29□□□□□ -0.92
PDGFRA-206ENST00000508170 PARP2Q9UGN5 583 aa9.29□□□□□ -0.92
PDGFRA-206ENST00000508170 A6NJY4 79 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 ARHGAP4P98171 946 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 EXOSC10Q01780 885 aaKnown RBP9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 MTA1Q13330 715 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 NFE2Q16621 373 aaPredicted RBP9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 CCDC92Q53HC0 331 aaPredicted RBP9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 CARD10Q9BWT7 1032 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 SEZ6LQ9BYH1 1024 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 GPHNQ9NQX3 736 aaPredicted RBP9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 PCDHGB7Q9Y5F8 929 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 CDC45O75419 566 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 CDC37Q16543 378 aaPredicted RBP9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 TUSC1Q2TAM9 212 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 ZNF394Q53GI3 561 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 RPAINQ86UA6 219 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 TEX19Q8NA77 164 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 MYRIPQ8NFW9 859 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 PTPRHQ9HD43 1115 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 FANCLQ9NW38 375 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 ASAP1Q9ULH1 1129 aa9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 MRPS23Q9Y3D9 190 aaKnown RBP9.28□□□□□ -0.92
PDGFRA-206ENST00000508170 NR1I2O75469 434 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 TDO2P48775 406 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 LRRC41Q15345 812 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 TAS1R3Q7RTX0 852 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 KRT77Q7Z794 578 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 ERP27Q96DN0 273 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 KANSL2Q9H9L4 492 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 SLC45A1Q9Y2W3 748 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 USP17L3A6NCW0 530 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 USP17L4A6NCW7 530 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 PIK3CDO00329 1044 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 SORBS3O60504 671 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 LILRB3O75022 631 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 RACK1P63244 317 aaKnown RBP9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 USP17L2Q6R6M4 530 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 USP17L1Q7RTZ2 530 aa9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 SUGP1Q8IWZ8 645 aaKnown RBP9.27□□□□□ -0.93
PDGFRA-206ENST00000508170 SLC26A4O43511 780 aa9.26□□□□□ -0.93
PDGFRA-206ENST00000508170 CDKN1CP49918 316 aaPredicted RBP9.26□□□□□ -0.93
PDGFRA-206ENST00000508170 BRDTQ58F21 947 aaPredicted RBP9.26□□□□□ -0.93
PDGFRA-206ENST00000508170 C1orf216Q8TAB5 229 aa9.26□□□□□ -0.93
PDGFRA-206ENST00000508170 AGBL1Q96MI9 1066 aa9.26□□□□□ -0.93
PDGFRA-206ENST00000508170 VTI1BQ9UEU0 232 aa9.26□□□□□ -0.93
PDGFRA-206ENST00000508170 ABCF2Q9UG63 623 aa9.26□□□□□ -0.93
PDGFRA-206ENST00000508170 SPTLC1O15269 473 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 C21orf2O43822 256 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 SRGNP10124 158 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 HCLS1P14317 486 aaPredicted RBP9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 CTHP32929 405 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 FAM160A1Q05DH4 1040 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 GRAMD1BQ3KR37 738 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 DDX12PQ92771 950 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 SRPK1Q96SB4 655 aaKnown RBP9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 POLG2Q9UHN1 485 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 HDAC9Q9UKV0 1011 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 ABCB7O75027 752 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 RBP3P10745 1247 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 SEC13P55735 322 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 TMC4Q7Z404 712 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 SKAP1Q86WV1 359 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 HSCBQ8IWL3 235 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 ZNF513Q8N8E2 541 aaPredicted RBP9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 SPIRE2Q8WWL2 714 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 CLIC5Q9NZA1 410 aa9.25□□□□□ -0.93
PDGFRA-206ENST00000508170 ACBD5Q5T8D3 534 aaPredicted RBP9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 RSBN1LQ6PCB5 846 aaPredicted RBP9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 CKAP2LQ8IYA6 745 aa9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 ANP32BQ92688 251 aaKnown RBP9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 DUSP9Q99956 384 aaKnown RBP9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 TMX1Q9H3N1 280 aa9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 NACADO15069 1562 aa9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 MAP3K7O43318 606 aa9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 IGHDP01880 384 aa9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 PTK7Q13308 1070 aa9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 DSG2Q14126 1118 aa9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 CREBZFQ9NS37 354 aa9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 DDX41Q9UJV9 622 aaKnown RBP9.24□□□□□ -0.93
PDGFRA-206ENST00000508170 PRSS47A8MTI9 375 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 MYL3P08590 195 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 PDXDC1Q6P996 788 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 JAMLQ86YT9 394 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 IFNL3Q8IZI9 196 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 E2F7Q96AV8 911 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 ZNF700Q9H0M5 742 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 MASP1P48740 699 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 TOMM20Q15388 145 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 CXorf56Q9H5V9 222 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 EMILIN1Q9Y6C2 1016 aa9.23□□□□□ -0.93
PDGFRA-206ENST00000508170 RB1CC1Q8TDY2 1594 aa9.22□□□□□ -0.93
PDGFRA-206ENST00000508170 ALDH1L1O75891 902 aa9.22□□□□□ -0.93
PDGFRA-206ENST00000508170 HDGFL2Q7Z4V5 671 aaPredicted RBP9.22□□□□□ -0.93
PDGFRA-206ENST00000508170 C14orf80Q86SX3 495 aa9.22□□□□□ -0.93
PDGFRA-206ENST00000508170 PPP2R3BQ9Y5P8 575 aa9.22□□□□□ -0.93
PDGFRA-206ENST00000508170 CASP2P42575 452 aa9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 MTMR3Q13615 1198 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms