RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	KCNQ3	O43525	872 aa		18.34	■□□□□ 0.53
CDHR2-204	ENST00000508085	PELP1	Q8IZL8	1130 aa	Known RBP	18.34	■□□□□ 0.53
CDHR2-204	ENST00000508085	NLGN1	Q8N2Q7	840 aa		18.34	■□□□□ 0.53
CDHR2-204	ENST00000508085	BCOR	Q6W2J9	1755 aa		18.34	■□□□□ 0.53
CDHR2-204	ENST00000508085	COL15A1	P39059	1388 aa		18.33	■□□□□ 0.53
CDHR2-204	ENST00000508085	DCTN1	Q14203	1278 aa		18.33	■□□□□ 0.52
CDHR2-204	ENST00000508085	PXDNL	A1KZ92	1463 aa		18.33	■□□□□ 0.52
CDHR2-204	ENST00000508085	FKBP8	Q14318	412 aa		18.32	■□□□□ 0.52
CDHR2-204	ENST00000508085	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.31	■□□□□ 0.52
CDHR2-204	ENST00000508085	BTBD11	A6QL63	1104 aa		18.31	■□□□□ 0.52
CDHR2-204	ENST00000508085	HTATSF1	O43719	755 aa	Known RBP	18.31	■□□□□ 0.52
CDHR2-204	ENST00000508085	RTF1	Q92541	710 aa	Known RBP	18.31	■□□□□ 0.52
CDHR2-204	ENST00000508085	ARFGEF1	Q9Y6D6	1849 aa		18.3	■□□□□ 0.52
CDHR2-204	ENST00000508085	FMNL2	Q96PY5	1086 aa		18.3	■□□□□ 0.52
CDHR2-204	ENST00000508085	DLEC1	Q9Y238	1755 aa		18.3	■□□□□ 0.52
CDHR2-204	ENST00000508085	DDR1	Q08345	913 aa		18.29	■□□□□ 0.52
CDHR2-204	ENST00000508085	USPL1	Q5W0Q7	1092 aa		18.29	■□□□□ 0.52
CDHR2-204	ENST00000508085	STARD3NL	O95772	234 aa		18.28	■□□□□ 0.52
CDHR2-204	ENST00000508085	CANX	P27824	592 aa	Known RBP	18.28	■□□□□ 0.52
CDHR2-204	ENST00000508085	NARF	Q9UHQ1	456 aa		18.28	■□□□□ 0.52
CDHR2-204	ENST00000508085	ANKRD31	Q8N7Z5	1873 aa		18.27	■□□□□ 0.52
CDHR2-204	ENST00000508085	TM4SF1	P30408	202 aa		18.27	■□□□□ 0.52
CDHR2-204	ENST00000508085	EIF5	P55010	431 aa	Known RBP	18.27	■□□□□ 0.52
CDHR2-204	ENST00000508085	NFE2L2	Q16236	605 aa		18.27	■□□□□ 0.52
CDHR2-204	ENST00000508085	BCL2L12	Q9HB09	334 aa		18.27	■□□□□ 0.52
CDHR2-204	ENST00000508085	WWC3	Q9ULE0	1092 aa		18.27	■□□□□ 0.52
CDHR2-204	ENST00000508085	PARP3	Q9Y6F1	533 aa		18.27	■□□□□ 0.52
CDHR2-204	ENST00000508085	PRAMEF22	A3QJZ6	481 aa		18.26	■□□□□ 0.51
CDHR2-204	ENST00000508085	ZPR1	O75312	459 aa		18.26	■□□□□ 0.51
CDHR2-204	ENST00000508085	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.26	■□□□□ 0.51
CDHR2-204	ENST00000508085	POLRMT	O00411	1230 aa	Known RBP	18.25	■□□□□ 0.51
CDHR2-204	ENST00000508085	GRIN3B	O60391	1043 aa		18.25	■□□□□ 0.51
CDHR2-204	ENST00000508085	A1BG	P04217	495 aa		18.25	■□□□□ 0.51
CDHR2-204	ENST00000508085	NEFM	P07197	916 aa		18.25	■□□□□ 0.51
CDHR2-204	ENST00000508085	MAPK8IP3	Q9UPT6	1336 aa		18.24	■□□□□ 0.51
CDHR2-204	ENST00000508085	ZEB1	P37275	1124 aa	Predicted RBP	18.24	■□□□□ 0.51
CDHR2-204	ENST00000508085	TAF7	Q15545	349 aa	Predicted RBP	18.24	■□□□□ 0.51
CDHR2-204	ENST00000508085	THUMPD2	Q9BTF0	503 aa	Known RBP	18.24	■□□□□ 0.51
CDHR2-204	ENST00000508085	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.24	■□□□□ 0.51
CDHR2-204	ENST00000508085	MIS18A	Q9NYP9	233 aa		18.24	■□□□□ 0.51
CDHR2-204	ENST00000508085	USP16	Q9Y5T5	823 aa		18.24	■□□□□ 0.51
CDHR2-204	ENST00000508085	TGFB2	P61812	414 aa		18.23	■□□□□ 0.51
CDHR2-204	ENST00000508085	NFIX	Q14938	502 aa		18.23	■□□□□ 0.51
CDHR2-204	ENST00000508085	ZNF784	Q8NCA9	323 aa	Predicted RBP	18.23	■□□□□ 0.51
CDHR2-204	ENST00000508085	PNN	Q9H307	717 aa	Known RBP	18.23	■□□□□ 0.51
CDHR2-204	ENST00000508085		A0A0G2JLW4	131 aa		18.22	■□□□□ 0.51
CDHR2-204	ENST00000508085	IL6ST	P40189	918 aa	Predicted RBP	18.22	■□□□□ 0.51
CDHR2-204	ENST00000508085	PIP4K2A	P48426	406 aa	Predicted RBP	18.22	■□□□□ 0.51
CDHR2-204	ENST00000508085	COL11A2	P13942	1736 aa	Predicted RBP	18.22	■□□□□ 0.51
CDHR2-204	ENST00000508085	NUP98	P52948	1817 aa		18.21	■□□□□ 0.51
CDHR2-204	ENST00000508085		A0A087WZG4	1122 aa		18.21	■□□□□ 0.51
CDHR2-204	ENST00000508085	SNRPA1	P09661	255 aa	Known RBP	18.21	■□□□□ 0.51
CDHR2-204	ENST00000508085	DPEP1	P16444	411 aa		18.21	■□□□□ 0.51
CDHR2-204	ENST00000508085	CACNA1S	Q13698	1873 aa		18.2	■□□□□ 0.5
CDHR2-204	ENST00000508085	KCNA3	P22001	575 aa		18.2	■□□□□ 0.5
CDHR2-204	ENST00000508085	TBC1D2B	Q9UPU7	963 aa		18.2	■□□□□ 0.5
CDHR2-204	ENST00000508085	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.2	■□□□□ 0.5
CDHR2-204	ENST00000508085	SBF1	O95248	1867 aa		18.19	■□□□□ 0.5
CDHR2-204	ENST00000508085	CARMIL3	Q8ND23	1372 aa		18.18	■□□□□ 0.5
CDHR2-204	ENST00000508085	NBPF26	B4DH59	902 aa		18.18	■□□□□ 0.5
CDHR2-204	ENST00000508085	TMPO	P42166	694 aa	Known RBP	18.18	■□□□□ 0.5
CDHR2-204	ENST00000508085	TBC1D9B	Q66K14	1250 aa		18.18	■□□□□ 0.5
CDHR2-204	ENST00000508085	NBPF10	Q6P3W6	841 aa	Known RBP	18.18	■□□□□ 0.5
CDHR2-204	ENST00000508085	CCDC146	Q8IYE0	955 aa		18.18	■□□□□ 0.5
CDHR2-204	ENST00000508085	NBPF15	Q8N660	670 aa		18.18	■□□□□ 0.5
CDHR2-204	ENST00000508085	CAMTA2	O94983	1202 aa		18.17	■□□□□ 0.5
CDHR2-204	ENST00000508085	RIPK4	P57078	832 aa		18.17	■□□□□ 0.5
CDHR2-204	ENST00000508085	EIF4A1	P60842	406 aa	Known RBP	18.17	■□□□□ 0.5
CDHR2-204	ENST00000508085	PNISR	Q8TF01	805 aa	Known RBP	18.17	■□□□□ 0.5
CDHR2-204	ENST00000508085	ADCY9	O60503	1353 aa		18.17	■□□□□ 0.5
CDHR2-204	ENST00000508085	CCDC88A	Q3V6T2	1871 aa		18.16	■□□□□ 0.5
CDHR2-204	ENST00000508085	SERPINB2	P05120	415 aa		18.16	■□□□□ 0.5
CDHR2-204	ENST00000508085	CHRNA5	P30532	468 aa		18.16	■□□□□ 0.5
CDHR2-204	ENST00000508085	BICDL1	Q6ZP65	573 aa		18.16	■□□□□ 0.5
CDHR2-204	ENST00000508085	ADAMTS8	Q9UP79	889 aa		18.16	■□□□□ 0.5
CDHR2-204	ENST00000508085	BCS1L	Q9Y276	419 aa		18.16	■□□□□ 0.5
CDHR2-204	ENST00000508085	RRP7A	Q9Y3A4	280 aa	Known RBP	18.16	■□□□□ 0.5
CDHR2-204	ENST00000508085	ARFGEF2	Q9Y6D5	1785 aa		18.15	■□□□□ 0.5
CDHR2-204	ENST00000508085	WDR43	Q15061	677 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
CDHR2-204	ENST00000508085	DZIP3	Q86Y13	1208 aa	Known RBP	18.15	■□□□□ 0.5
CDHR2-204	ENST00000508085	GIGYF1	O75420	1035 aa	Predicted RBP	18.14	■□□□□ 0.49
CDHR2-204	ENST00000508085	RUNDC1	Q96C34	613 aa		18.14	■□□□□ 0.49
CDHR2-204	ENST00000508085	ATP10D	Q9P241	1426 aa		18.14	■□□□□ 0.49
CDHR2-204	ENST00000508085	NEUROD2	Q15784	382 aa		18.12	■□□□□ 0.49
CDHR2-204	ENST00000508085	PIM2	Q9P1W9	311 aa		18.12	■□□□□ 0.49
CDHR2-204	ENST00000508085	TRIM35	Q9UPQ4	493 aa		18.12	■□□□□ 0.49
CDHR2-204	ENST00000508085	LMOD3	Q0VAK6	560 aa		18.11	■□□□□ 0.49
CDHR2-204	ENST00000508085	NPM2	Q86SE8	214 aa	Known RBP	18.11	■□□□□ 0.49
CDHR2-204	ENST00000508085	TSPYL4	Q9UJ04	414 aa		18.11	■□□□□ 0.49
CDHR2-204	ENST00000508085	ANKRD36C	Q5JPF3	1778 aa		18.11	■□□□□ 0.49
CDHR2-204	ENST00000508085	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.1	■□□□□ 0.49
CDHR2-204	ENST00000508085	DALRD3	Q5D0E6	543 aa	Known RBP	18.1	■□□□□ 0.49
CDHR2-204	ENST00000508085	PRR5L	Q6MZQ0	368 aa		18.1	■□□□□ 0.49
CDHR2-204	ENST00000508085	FER1L6	Q2WGJ9	1857 aa		18.09	■□□□□ 0.49
CDHR2-204	ENST00000508085	CCDC184	Q52MB2	194 aa		18.09	■□□□□ 0.49
CDHR2-204	ENST00000508085	CCDC24	Q8N4L8	307 aa		18.09	■□□□□ 0.49
CDHR2-204	ENST00000508085	SLX4	Q8IY92	1834 aa		18.09	■□□□□ 0.49
CDHR2-204	ENST00000508085	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.09	■□□□□ 0.49
CDHR2-204	ENST00000508085	CLEC4G	Q6UXB4	293 aa		18.08	■□□□□ 0.48
CDHR2-204	ENST00000508085	SETDB2	Q96T68	719 aa		18.08	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms