RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TRAK2O60296 914 aa17.8■□□□□ 0.44
DDX41-208ENST00000507955 DBF4Q9UBU7 674 aaPredicted RBP17.8■□□□□ 0.44
DDX41-208ENST00000507955 KDM3BQ7LBC6 1761 aa17.79■□□□□ 0.44
DDX41-208ENST00000507955 ERC2O15083 957 aa17.79■□□□□ 0.44
DDX41-208ENST00000507955 L1TD1Q5T7N2 865 aaKnown RBP17.79■□□□□ 0.44
DDX41-208ENST00000507955 PANK2Q9BZ23 570 aa17.79■□□□□ 0.44
DDX41-208ENST00000507955 CACNA1FO60840 1977 aa17.79■□□□□ 0.44
DDX41-208ENST00000507955 RAPGEF4Q8WZA2 1011 aa17.79■□□□□ 0.44
DDX41-208ENST00000507955 RRAGDQ9NQL2 400 aaPredicted RBP17.79■□□□□ 0.44
DDX41-208ENST00000507955 MYL6BP14649 208 aa17.78■□□□□ 0.44
DDX41-208ENST00000507955 LMO7Q8WWI1 1683 aa17.78■□□□□ 0.44
DDX41-208ENST00000507955 AK9Q5TCS8 1911 aa17.78■□□□□ 0.44
DDX41-208ENST00000507955 SSFA2P28290 1259 aa17.78■□□□□ 0.44
DDX41-208ENST00000507955 PA2G4Q9UQ80 394 aaKnown RBP17.78■□□□□ 0.44
DDX41-208ENST00000507955 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.44
DDX41-208ENST00000507955 MST1RQ04912 1400 aa17.77■□□□□ 0.44
DDX41-208ENST00000507955 HOXB7P09629 217 aa17.77■□□□□ 0.43
DDX41-208ENST00000507955 RABEP1Q15276 862 aa17.77■□□□□ 0.43
DDX41-208ENST00000507955 PALD1Q9ULE6 856 aa17.77■□□□□ 0.43
DDX41-208ENST00000507955 PHRF1Q9P1Y6 1649 aaKnown RBP17.77■□□□□ 0.43
DDX41-208ENST00000507955 GOLGA6L3A6NEY3 463 aa17.76■□□□□ 0.43
DDX41-208ENST00000507955 PKP1Q13835 747 aa17.76■□□□□ 0.43
DDX41-208ENST00000507955 POLA2Q14181 598 aa17.76■□□□□ 0.43
DDX41-208ENST00000507955 C9orf78Q9NZ63 289 aaPredicted RBP17.76■□□□□ 0.43
DDX41-208ENST00000507955 REC8O95072 547 aa17.76■□□□□ 0.43
DDX41-208ENST00000507955 CHMLP26374 656 aa17.76■□□□□ 0.43
DDX41-208ENST00000507955 JARID2Q92833 1246 aaPredicted RBP17.76■□□□□ 0.43
DDX41-208ENST00000507955 ESYT1Q9BSJ8 1104 aa17.76■□□□□ 0.43
DDX41-208ENST00000507955 PXDNLA1KZ92 1463 aa17.76■□□□□ 0.43
DDX41-208ENST00000507955 STRCP1A6NGW2 1772 aa17.76■□□□□ 0.43
DDX41-208ENST00000507955 NOL8Q76FK4 1167 aaKnown RBP17.75■□□□□ 0.43
DDX41-208ENST00000507955 ZGPATQ8N5A5 531 aaKnown RBP17.75■□□□□ 0.43
DDX41-208ENST00000507955 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
DDX41-208ENST00000507955 NCAPD2Q15021 1401 aa17.75■□□□□ 0.43
DDX41-208ENST00000507955 RAB3GAP1Q15042 981 aa17.75■□□□□ 0.43
DDX41-208ENST00000507955 ZNF790Q6PG37 636 aa17.75■□□□□ 0.43
DDX41-208ENST00000507955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.75■□□□□ 0.43
DDX41-208ENST00000507955 PDIA6Q15084 440 aa17.74■□□□□ 0.43
DDX41-208ENST00000507955 KSR2Q6VAB6 950 aa17.74■□□□□ 0.43
DDX41-208ENST00000507955 MEGF6O75095 1541 aa17.73■□□□□ 0.43
DDX41-208ENST00000507955 PHKG2P15735 406 aa17.73■□□□□ 0.43
DDX41-208ENST00000507955 OS9Q13438 667 aaPredicted RBP17.73■□□□□ 0.43
DDX41-208ENST00000507955 STAP2Q9UGK3 403 aa17.73■□□□□ 0.43
DDX41-208ENST00000507955 NPHP3Q7Z494 1330 aa17.73■□□□□ 0.43
DDX41-208ENST00000507955 ZNF496Q96IT1 587 aaPredicted RBP17.73■□□□□ 0.43
DDX41-208ENST00000507955 HEG1Q9ULI3 1381 aa17.73■□□□□ 0.43
DDX41-208ENST00000507955 KDM6AO15550 1401 aaPredicted RBP17.73■□□□□ 0.43
DDX41-208ENST00000507955 CYP27B1O15528 508 aa17.72■□□□□ 0.43
DDX41-208ENST00000507955 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
DDX41-208ENST00000507955 NEK4P51957 841 aa17.72■□□□□ 0.43
DDX41-208ENST00000507955 CHAMP1Q96JM3 812 aa17.72■□□□□ 0.43
DDX41-208ENST00000507955 SLC52A2Q9HAB3 445 aa17.72■□□□□ 0.43
DDX41-208ENST00000507955 USP16Q9Y5T5 823 aa17.72■□□□□ 0.43
DDX41-208ENST00000507955 PI4K2BQ8TCG2 481 aa17.72■□□□□ 0.43
DDX41-208ENST00000507955 KLHDC4Q8TBB5 520 aa17.71■□□□□ 0.43
DDX41-208ENST00000507955 KAZALD1Q96I82 304 aa17.71■□□□□ 0.43
DDX41-208ENST00000507955 ALS2Q96Q42 1657 aa17.71■□□□□ 0.42
DDX41-208ENST00000507955 DDX11L8A8MPP1 907 aa17.7■□□□□ 0.42
DDX41-208ENST00000507955 SUCLG2Q96I99 432 aa17.7■□□□□ 0.42
DDX41-208ENST00000507955 KIF1BPQ96EK5 621 aa17.7■□□□□ 0.42
DDX41-208ENST00000507955 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
DDX41-208ENST00000507955 IGKV5-2P06315 115 aa17.69■□□□□ 0.42
DDX41-208ENST00000507955 FOXD4L5Q5VV16 416 aaPredicted RBP17.69■□□□□ 0.42
DDX41-208ENST00000507955 COPS6Q7L5N1 327 aa17.69■□□□□ 0.42
DDX41-208ENST00000507955 RIC3Q7Z5B4 369 aa17.69■□□□□ 0.42
DDX41-208ENST00000507955 FOXD4L4Q8WXT5 416 aaPredicted RBP17.69■□□□□ 0.42
DDX41-208ENST00000507955 SIL1Q9H173 461 aa17.69■□□□□ 0.42
DDX41-208ENST00000507955 DDX21Q9NR30 783 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX41-208ENST00000507955 CIZ1Q9ULV3 898 aaPredicted RBP17.69■□□□□ 0.42
DDX41-208ENST00000507955 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
DDX41-208ENST00000507955 XAGE3Q8WTP9 111 aa17.69■□□□□ 0.42
DDX41-208ENST00000507955 BICC1Q9H694 974 aaKnown RBP17.69■□□□□ 0.42
DDX41-208ENST00000507955 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
DDX41-208ENST00000507955 N4BP2Q86UW6 1770 aaPredicted RBP17.69■□□□□ 0.42
DDX41-208ENST00000507955 ST18O60284 1047 aa17.68■□□□□ 0.42
DDX41-208ENST00000507955 CADPS2Q86UW7 1296 aa17.68■□□□□ 0.42
DDX41-208ENST00000507955 SPG7Q9UQ90 795 aa17.68■□□□□ 0.42
DDX41-208ENST00000507955 TUBGCP6Q96RT7 1819 aa17.68■□□□□ 0.42
DDX41-208ENST00000507955 IFNL2Q8IZJ0 200 aa17.68■□□□□ 0.42
DDX41-208ENST00000507955 KIF1AQ12756 1690 aa17.67■□□□□ 0.42
DDX41-208ENST00000507955 GRM8O00222 908 aa17.67■□□□□ 0.42
DDX41-208ENST00000507955 CWC27Q6UX04 472 aaKnown RBP17.67■□□□□ 0.42
DDX41-208ENST00000507955 SPATA31A3Q5VYP0 1347 aa17.66■□□□□ 0.42
DDX41-208ENST00000507955 EPHA10Q5JZY3 1008 aa17.66■□□□□ 0.42
DDX41-208ENST00000507955 GAS2L3Q86XJ1 694 aa17.66■□□□□ 0.42
DDX41-208ENST00000507955 LINS1Q8NG48 757 aa17.66■□□□□ 0.42
DDX41-208ENST00000507955 MYD88Q99836 296 aa17.66■□□□□ 0.42
DDX41-208ENST00000507955 LARP6Q9BRS8 491 aaKnown RBP17.66■□□□□ 0.42
DDX41-208ENST00000507955 CAMTA1Q9Y6Y1 1673 aa17.66■□□□□ 0.42
DDX41-208ENST00000507955 DTNBO60941 627 aa17.66■□□□□ 0.42
DDX41-208ENST00000507955 BRINP3Q76B58 766 aa17.66■□□□□ 0.42
DDX41-208ENST00000507955 GBP4Q96PP9 640 aa17.66■□□□□ 0.42
DDX41-208ENST00000507955 ALDH1L1O75891 902 aa17.65■□□□□ 0.42
DDX41-208ENST00000507955 CHMP4AQ9BY43 222 aa17.65■□□□□ 0.42
DDX41-208ENST00000507955 SIPA1L3O60292 1781 aaPredicted RBP17.65■□□□□ 0.42
DDX41-208ENST00000507955 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
DDX41-208ENST00000507955 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
DDX41-208ENST00000507955 TMX3Q96JJ7 454 aa17.65■□□□□ 0.42
DDX41-208ENST00000507955 CCDC8Q9H0W5 538 aaPredicted RBP17.65■□□□□ 0.42
DDX41-208ENST00000507955 GRPEL1Q9HAV7 217 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms