RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 VSIG10Q8N0Z9 540 aa22.28■■□□□ 1.16
RNF4-209ENST00000507784 CLUAP1Q96AJ1 413 aa22.28■■□□□ 1.16
RNF4-209ENST00000507784 TEX13AQ9BXU3 409 aaPredicted RBP22.28■■□□□ 1.16
RNF4-209ENST00000507784 DBF4Q9UBU7 674 aaPredicted RBP22.28■■□□□ 1.16
RNF4-209ENST00000507784 TNNQ9UQP3 1299 aa22.28■■□□□ 1.16
RNF4-209ENST00000507784 PALLDQ8WX93 1383 aa22.27■■□□□ 1.16
RNF4-209ENST00000507784 ANXA1P04083 346 aa22.27■■□□□ 1.16
RNF4-209ENST00000507784 MS4A1P11836 297 aa22.27■■□□□ 1.16
RNF4-209ENST00000507784 ATF7IPQ6VMQ6 1270 aa22.27■■□□□ 1.16
RNF4-209ENST00000507784 TRIM37O94972 964 aa22.26■■□□□ 1.15
RNF4-209ENST00000507784 FTSJ3Q8IY81 847 aaKnown RBP22.26■■□□□ 1.15
RNF4-209ENST00000507784 API5Q9BZZ5 524 aaKnown RBP22.26■■□□□ 1.15
RNF4-209ENST00000507784 BCL11BQ9C0K0 894 aaPredicted RBP22.26■■□□□ 1.15
RNF4-209ENST00000507784 MYL6BP14649 208 aa22.25■■□□□ 1.15
RNF4-209ENST00000507784 ATP6V1AP38606 617 aa22.25■■□□□ 1.15
RNF4-209ENST00000507784 PDE3AQ14432 1141 aa22.25■■□□□ 1.15
RNF4-209ENST00000507784 DZIP1LQ8IYY4 767 aaKnown RBP22.25■■□□□ 1.15
RNF4-209ENST00000507784 PANK1Q8TE04 598 aa22.25■■□□□ 1.15
RNF4-209ENST00000507784 ARHGAP45Q92619 1136 aa22.25■■□□□ 1.15
RNF4-209ENST00000507784 PHAXQ9H814 394 aaKnown RBP22.25■■□□□ 1.15
RNF4-209ENST00000507784 LOC102724428A0A0B4J2F2 783 aa22.24■■□□□ 1.15
RNF4-209ENST00000507784 TRIM27P14373 513 aa22.24■■□□□ 1.15
RNF4-209ENST00000507784 PIP4K2AP48426 406 aaPredicted RBP22.24■■□□□ 1.15
RNF4-209ENST00000507784 SIK1P57059 783 aa22.24■■□□□ 1.15
RNF4-209ENST00000507784 SLC4A9Q96Q91 983 aa22.24■■□□□ 1.15
RNF4-209ENST00000507784 CRBNQ96SW2 442 aa22.24■■□□□ 1.15
RNF4-209ENST00000507784 DDX21Q9NR30 783 aaKnown RBP eCLIP22.24■■□□□ 1.15
RNF4-209ENST00000507784 HYPKQ9NX55 129 aa22.24■■□□□ 1.15
RNF4-209ENST00000507784 STARD3NLO95772 234 aa22.23■■□□□ 1.15
RNF4-209ENST00000507784 FLIIQ13045 1269 aa22.23■■□□□ 1.15
RNF4-209ENST00000507784 FKBP5Q13451 457 aaPredicted RBP22.23■■□□□ 1.15
RNF4-209ENST00000507784 PROSER3Q2NL68 480 aa22.23■■□□□ 1.15
RNF4-209ENST00000507784 PTPRCP08575 1304 aa22.23■■□□□ 1.15
RNF4-209ENST00000507784 A1BGP04217 495 aa22.22■■□□□ 1.15
RNF4-209ENST00000507784 TJP1Q07157 1748 aa22.21■■□□□ 1.15
RNF4-209ENST00000507784 AIMP1Q12904 312 aaKnown RBP22.21■■□□□ 1.15
RNF4-209ENST00000507784 PDIA6Q15084 440 aa22.21■■□□□ 1.15
RNF4-209ENST00000507784 EXOC6Q8TAG9 804 aa22.21■■□□□ 1.15
RNF4-209ENST00000507784 COG6Q9Y2V7 657 aa22.21■■□□□ 1.15
RNF4-209ENST00000507784 ERBB4Q15303 1308 aa22.2■■□□□ 1.14
RNF4-209ENST00000507784 CYP19A1P11511 503 aaPredicted RBP22.19■■□□□ 1.14
RNF4-209ENST00000507784 RLBP1P12271 317 aa22.19■■□□□ 1.14
RNF4-209ENST00000507784 ITPK1Q13572 414 aa22.18■■□□□ 1.14
RNF4-209ENST00000507784 NBPF26B4DH59 902 aa22.17■■□□□ 1.14
RNF4-209ENST00000507784 KCNQ4P56696 695 aa22.17■■□□□ 1.14
RNF4-209ENST00000507784 NBPF14Q5TI25 921 aa22.17■■□□□ 1.14
RNF4-209ENST00000507784 NBPF10Q6P3W6 841 aaKnown RBP22.17■■□□□ 1.14
RNF4-209ENST00000507784 SLC4A10Q6U841 1118 aa22.17■■□□□ 1.14
RNF4-209ENST00000507784 TMEM57Q8N5G2 664 aa22.17■■□□□ 1.14
RNF4-209ENST00000507784 NBPF15Q8N660 670 aa22.17■■□□□ 1.14
RNF4-209ENST00000507784 XAGE3Q8WTP9 111 aa22.17■■□□□ 1.14
RNF4-209ENST00000507784 CCNL1Q9UK58 526 aaPredicted RBP22.17■■□□□ 1.14
RNF4-209ENST00000507784 ZNF330Q9Y3S2 320 aaPredicted RBP22.17■■□□□ 1.14
RNF4-209ENST00000507784 F6X3S4 739 aa22.16■■□□□ 1.14
RNF4-209ENST00000507784 COPS6Q7L5N1 327 aa22.16■■□□□ 1.14
RNF4-209ENST00000507784 ITPRIPQ8IWB1 547 aa22.16■■□□□ 1.14
RNF4-209ENST00000507784 LY75O60449 1722 aa22.15■■□□□ 1.14
RNF4-209ENST00000507784 DDX58O95786 925 aaKnown RBP22.15■■□□□ 1.14
RNF4-209ENST00000507784 ERICH6BQ5W0A0 696 aa22.15■■□□□ 1.14
RNF4-209ENST00000507784 ABCC4O15439 1325 aa22.14■■□□□ 1.14
RNF4-209ENST00000507784 APBA3O96018 575 aa22.14■■□□□ 1.13
RNF4-209ENST00000507784 MVPQ14764 893 aaKnown RBP22.14■■□□□ 1.13
RNF4-209ENST00000507784 ARXQ96QS3 562 aa22.14■■□□□ 1.13
RNF4-209ENST00000507784 CCDC87Q9NVE4 849 aa22.14■■□□□ 1.13
RNF4-209ENST00000507784 ZNF831Q5JPB2 1677 aa22.14■■□□□ 1.13
RNF4-209ENST00000507784 PI4KAP2A4QPH2 592 aa22.13■■□□□ 1.13
RNF4-209ENST00000507784 CRKLP46109 303 aaKnown RBP22.13■■□□□ 1.13
RNF4-209ENST00000507784 RIC3Q7Z5B4 369 aa22.13■■□□□ 1.13
RNF4-209ENST00000507784 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
RNF4-209ENST00000507784 PI4KAP1Q8N8J0 262 aa22.13■■□□□ 1.13
RNF4-209ENST00000507784 KSR2Q6VAB6 950 aa22.12■■□□□ 1.13
RNF4-209ENST00000507784 LINC00116Q8NCU8 138 aa22.12■■□□□ 1.13
RNF4-209ENST00000507784 ZBTB1Q9Y2K1 713 aa22.12■■□□□ 1.13
RNF4-209ENST00000507784 CICQ96RK0 1608 aaPredicted RBP22.12■■□□□ 1.13
RNF4-209ENST00000507784 LRP10Q7Z4F1 713 aa22.11■■□□□ 1.13
RNF4-209ENST00000507784 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
RNF4-209ENST00000507784 DDX19BQ9UMR2 479 aa22.11■■□□□ 1.13
RNF4-209ENST00000507784 MAP3K2Q9Y2U5 619 aa22.11■■□□□ 1.13
RNF4-209ENST00000507784 COL5A3P25940 1745 aaPredicted RBP22.11■■□□□ 1.13
RNF4-209ENST00000507784 CCT4P50991 539 aaKnown RBP22.1■■□□□ 1.13
RNF4-209ENST00000507784 INTS5Q6P9B9 1019 aaKnown RBP22.1■■□□□ 1.13
RNF4-209ENST00000507784 ANKRD13DQ6ZTN6 518 aa22.1■■□□□ 1.13
RNF4-209ENST00000507784 INTS3Q68E01 1043 aaKnown RBP22.09■■□□□ 1.13
RNF4-209ENST00000507784 TTLL7Q6ZT98 887 aa22.09■■□□□ 1.13
RNF4-209ENST00000507784 ADCY9O60503 1353 aa22.09■■□□□ 1.13
RNF4-209ENST00000507784 IL6STP40189 918 aaPredicted RBP22.08■■□□□ 1.13
RNF4-209ENST00000507784 KIF6Q6ZMV9 814 aa22.08■■□□□ 1.13
RNF4-209ENST00000507784 PPP4R2Q9NY27 417 aa22.08■■□□□ 1.13
RNF4-209ENST00000507784 TAF1LQ8IZX4 1826 aa22.08■■□□□ 1.12
RNF4-209ENST00000507784 MYH14Q7Z406 1995 aaKnown RBP22.07■■□□□ 1.12
RNF4-209ENST00000507784 PLBD2Q8NHP8 589 aa22.07■■□□□ 1.12
RNF4-209ENST00000507784 TNS1Q9HBL0 1735 aaKnown RBP22.06■■□□□ 1.12
RNF4-209ENST00000507784 TXNRD1Q16881 649 aa22.06■■□□□ 1.12
RNF4-209ENST00000507784 SLC27A3Q5K4L6 730 aa22.06■■□□□ 1.12
RNF4-209ENST00000507784 SRCIN1Q9C0H9 1055 aa22.06■■□□□ 1.12
RNF4-209ENST00000507784 CHMP4BQ9H444 224 aaKnown RBP22.06■■□□□ 1.12
RNF4-209ENST00000507784 ZBTB3Q9H5J0 574 aa22.06■■□□□ 1.12
RNF4-209ENST00000507784 CNTNAP4Q9C0A0 1308 aa22.06■■□□□ 1.12
RNF4-209ENST00000507784 RREB1Q92766 1687 aa22.05■■□□□ 1.12
RNF4-209ENST00000507784 PLSCR1O15162 318 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms