RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 PCDHGC4Q9Y5F7 938 aa10.61□□□□□ -0.71
LINC01088-203ENST00000507476 FOXK2Q01167 660 aa10.6□□□□□ -0.71
LINC01088-203ENST00000507476 FIGNL1Q6PIW4 674 aa10.6□□□□□ -0.71
LINC01088-203ENST00000507476 NLRP8Q86W28 1048 aa10.6□□□□□ -0.71
LINC01088-203ENST00000507476 A0A1W2PNR3 127 aa10.59□□□□□ -0.71
LINC01088-203ENST00000507476 LZTS3O60299 673 aaPredicted RBP10.59□□□□□ -0.71
LINC01088-203ENST00000507476 IGHA1P01876 353 aa10.59□□□□□ -0.71
LINC01088-203ENST00000507476 ITGB2P05107 769 aa10.59□□□□□ -0.71
LINC01088-203ENST00000507476 WWC1Q8IX03 1113 aa10.59□□□□□ -0.71
LINC01088-203ENST00000507476 DEPDC4Q8N2C3 294 aa10.59□□□□□ -0.71
LINC01088-203ENST00000507476 GOLGA6L1Q8N7Z2 621 aa10.59□□□□□ -0.71
LINC01088-203ENST00000507476 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC01088-203ENST00000507476 EDARADDQ8WWZ3 215 aa10.59□□□□□ -0.71
LINC01088-203ENST00000507476 ZNF358Q9NW07 568 aa10.59□□□□□ -0.71
LINC01088-203ENST00000507476 LOC100996750A0A140TA64 210 aa10.58□□□□□ -0.72
LINC01088-203ENST00000507476 USP17L5A8MUK1 530 aa10.58□□□□□ -0.72
LINC01088-203ENST00000507476 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
LINC01088-203ENST00000507476 KRTAP4-6Q9BYQ5 205 aa10.58□□□□□ -0.72
LINC01088-203ENST00000507476 ZDHHC3Q9NYG2 299 aa10.58□□□□□ -0.72
LINC01088-203ENST00000507476 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
LINC01088-203ENST00000507476 GGA1Q9UJY5 639 aa10.58□□□□□ -0.72
LINC01088-203ENST00000507476 PARP3Q9Y6F1 533 aa10.58□□□□□ -0.72
LINC01088-203ENST00000507476 ATXN7O15265 892 aaPredicted RBP10.57□□□□□ -0.72
LINC01088-203ENST00000507476 RAD21O60216 631 aa10.57□□□□□ -0.72
LINC01088-203ENST00000507476 HOXB4P17483 251 aaPredicted RBP10.57□□□□□ -0.72
LINC01088-203ENST00000507476 FLIIQ13045 1269 aa10.57□□□□□ -0.72
LINC01088-203ENST00000507476 PLA2G4EQ3MJ16 856 aa10.57□□□□□ -0.72
LINC01088-203ENST00000507476 ARSJQ5FYB0 599 aaPredicted RBP10.57□□□□□ -0.72
LINC01088-203ENST00000507476 SLCO4C1Q6ZQN7 724 aa10.57□□□□□ -0.72
LINC01088-203ENST00000507476 ZDHHC1Q8WTX9 485 aa10.57□□□□□ -0.72
LINC01088-203ENST00000507476 ZIC5Q96T25 663 aa10.57□□□□□ -0.72
LINC01088-203ENST00000507476 SCHIP1Q9P0W5 487 aaPredicted RBP10.57□□□□□ -0.72
LINC01088-203ENST00000507476 BACH1O14867 736 aa10.56□□□□□ -0.72
LINC01088-203ENST00000507476 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
LINC01088-203ENST00000507476 EPHA4P54764 986 aa10.56□□□□□ -0.72
LINC01088-203ENST00000507476 TNP2Q05952 138 aa10.56□□□□□ -0.72
LINC01088-203ENST00000507476 PSME1Q06323 249 aa10.56□□□□□ -0.72
LINC01088-203ENST00000507476 DCDC2BA2VCK2 349 aa10.55□□□□□ -0.72
LINC01088-203ENST00000507476 TATP17735 454 aaPredicted RBP10.55□□□□□ -0.72
LINC01088-203ENST00000507476 UCN2Q96RP3 112 aa10.55□□□□□ -0.72
LINC01088-203ENST00000507476 ARAFP10398 606 aa10.54□□□□□ -0.72
LINC01088-203ENST00000507476 MAPTP10636 758 aaKnown RBP10.54□□□□□ -0.72
LINC01088-203ENST00000507476 TXLNAP40222 546 aa10.54□□□□□ -0.72
LINC01088-203ENST00000507476 CD33P20138 364 aa10.53□□□□□ -0.72
LINC01088-203ENST00000507476 RRAGCQ9HB90 399 aa10.53□□□□□ -0.72
LINC01088-203ENST00000507476 MKL2Q9ULH7 1088 aa10.53□□□□□ -0.72
LINC01088-203ENST00000507476 KIAA1024Q9UPX6 916 aa10.53□□□□□ -0.72
LINC01088-203ENST00000507476 NEURL1BA8MQ27 555 aa10.52□□□□□ -0.73
LINC01088-203ENST00000507476 ZBTB7BO15156 539 aaPredicted RBP10.52□□□□□ -0.73
LINC01088-203ENST00000507476 EPXP11678 715 aa10.52□□□□□ -0.73
LINC01088-203ENST00000507476 FAM182BQ5T319 152 aa10.52□□□□□ -0.73
LINC01088-203ENST00000507476 HDGFL1Q5TGJ6 251 aa10.52□□□□□ -0.73
LINC01088-203ENST00000507476 LINC00114Q6XXX2 140 aa10.52□□□□□ -0.73
LINC01088-203ENST00000507476 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
LINC01088-203ENST00000507476 TNS4Q8IZW8 715 aa10.52□□□□□ -0.73
LINC01088-203ENST00000507476 KLF15Q9UIH9 416 aa10.52□□□□□ -0.73
LINC01088-203ENST00000507476 USP17L3A6NCW0 530 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 USP17L4A6NCW7 530 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 KHNYNO15037 678 aaKnown RBP10.51□□□□□ -0.73
LINC01088-203ENST00000507476 FAM157BP0CG42 384 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 COL8A1P27658 744 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 TEAD4Q15561 434 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 TBCELQ5QJ74 424 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 USP17L1Q7RTZ2 530 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 SLC9A9Q8IVB4 645 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 L3MBTL2Q969R5 705 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 BTBD6Q96KE9 485 aa10.51□□□□□ -0.73
LINC01088-203ENST00000507476 NOS2P35228 1153 aa10.5□□□□□ -0.73
LINC01088-203ENST00000507476 CLDN10P78369 228 aa10.5□□□□□ -0.73
LINC01088-203ENST00000507476 SAMD5Q5TGI4 173 aa10.5□□□□□ -0.73
LINC01088-203ENST00000507476 TRIM50Q86XT4 487 aa10.5□□□□□ -0.73
LINC01088-203ENST00000507476 TPCN2Q8NHX9 752 aa10.5□□□□□ -0.73
LINC01088-203ENST00000507476 SPOCK3Q9BQ16 436 aa10.5□□□□□ -0.73
LINC01088-203ENST00000507476 STRN4Q9NRL3 753 aa10.5□□□□□ -0.73
LINC01088-203ENST00000507476 MSTNO14793 375 aa10.49□□□□□ -0.73
LINC01088-203ENST00000507476 PROCP04070 461 aa10.49□□□□□ -0.73
LINC01088-203ENST00000507476 AMPD1P23109 780 aa10.49□□□□□ -0.73
LINC01088-203ENST00000507476 BICDL1Q6ZP65 573 aa10.49□□□□□ -0.73
LINC01088-203ENST00000507476 C7orf43Q8WVR3 580 aa10.49□□□□□ -0.73
LINC01088-203ENST00000507476 GJA3Q9Y6H8 435 aa10.49□□□□□ -0.73
LINC01088-203ENST00000507476 KRBA1A5PL33 1030 aa10.48□□□□□ -0.73
LINC01088-203ENST00000507476 EML1O00423 815 aa10.48□□□□□ -0.73
LINC01088-203ENST00000507476 EFSO43281 561 aa10.48□□□□□ -0.73
LINC01088-203ENST00000507476 SH3PXD2AQ5TCZ1 1133 aa10.48□□□□□ -0.73
LINC01088-203ENST00000507476 FCHSD1Q86WN1 690 aa10.48□□□□□ -0.73
LINC01088-203ENST00000507476 SUV39H2Q9H5I1 410 aa10.48□□□□□ -0.73
LINC01088-203ENST00000507476 ATP9BO43861 1147 aa10.47□□□□□ -0.73
LINC01088-203ENST00000507476 CCDC102BQ68D86 513 aa10.47□□□□□ -0.73
LINC01088-203ENST00000507476 ADH6P28332 368 aa10.46□□□□□ -0.73
LINC01088-203ENST00000507476 DGKGP49619 791 aa10.46□□□□□ -0.73
LINC01088-203ENST00000507476 AVENQ9NQS1 362 aaPredicted RBP10.46□□□□□ -0.73
LINC01088-203ENST00000507476 ATP1A2P50993 1020 aa10.45□□□□□ -0.74
LINC01088-203ENST00000507476 LRRC69Q6ZNQ3 347 aa10.45□□□□□ -0.74
LINC01088-203ENST00000507476 CLUAP1Q96AJ1 413 aa10.45□□□□□ -0.74
LINC01088-203ENST00000507476 MARK1Q9P0L2 795 aa10.45□□□□□ -0.74
LINC01088-203ENST00000507476 ZNF232Q9UNY5 417 aa10.45□□□□□ -0.74
LINC01088-203ENST00000507476 SERTM1A2A2V5 107 aa10.44□□□□□ -0.74
LINC01088-203ENST00000507476 PCBP4P57723 403 aaKnown RBP10.44□□□□□ -0.74
LINC01088-203ENST00000507476 LAMC2Q13753 1193 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms