RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 ARHGAP27Q6ZUM4 889 aa21.27■■□□□ 1
SSBP2-207ENST00000507472 NARFQ9UHQ1 456 aa21.27■■□□□ 1
SSBP2-207ENST00000507472 ADAMTS7Q9UKP4 1686 aa21.27■■□□□ 1
SSBP2-207ENST00000507472 N4BP2Q86UW6 1770 aaPredicted RBP21.26■□□□□ 0.99
SSBP2-207ENST00000507472 CANXP27824 592 aaKnown RBP21.26■□□□□ 0.99
SSBP2-207ENST00000507472 ZNF790Q6PG37 636 aa21.26■□□□□ 0.99
SSBP2-207ENST00000507472 ZNF496Q96IT1 587 aaPredicted RBP21.26■□□□□ 0.99
SSBP2-207ENST00000507472 RSPH6AQ9H0K4 717 aa21.26■□□□□ 0.99
SSBP2-207ENST00000507472 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
SSBP2-207ENST00000507472 STARD3NLO95772 234 aa21.25■□□□□ 0.99
SSBP2-207ENST00000507472 PIM2Q9P1W9 311 aa21.25■□□□□ 0.99
SSBP2-207ENST00000507472 KIAA1551Q9HCM1 1747 aa21.24■□□□□ 0.99
SSBP2-207ENST00000507472 NFIXQ14938 502 aa21.24■□□□□ 0.99
SSBP2-207ENST00000507472 COL15A1P39059 1388 aa21.23■□□□□ 0.99
SSBP2-207ENST00000507472 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
SSBP2-207ENST00000507472 CHRNA5P30532 468 aa21.23■□□□□ 0.99
SSBP2-207ENST00000507472 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.99
SSBP2-207ENST00000507472 BCL2L12Q9HB09 334 aa21.23■□□□□ 0.99
SSBP2-207ENST00000507472 CEP350Q5VT06 3117 aa21.23■□□□□ 0.99
SSBP2-207ENST00000507472 VIRMAQ69YN4 1812 aaKnown RBP21.22■□□□□ 0.99
SSBP2-207ENST00000507472 EIF5P55010 431 aaKnown RBP21.22■□□□□ 0.99
SSBP2-207ENST00000507472 DALRD3Q5D0E6 543 aaKnown RBP21.21■□□□□ 0.99
SSBP2-207ENST00000507472 TEX13AQ9BXU3 409 aaPredicted RBP21.21■□□□□ 0.99
SSBP2-207ENST00000507472 CEMIPQ8WUJ3 1361 aa21.21■□□□□ 0.99
SSBP2-207ENST00000507472 HEG1Q9ULI3 1381 aa21.21■□□□□ 0.99
SSBP2-207ENST00000507472 KCNQ3O43525 872 aa21.2■□□□□ 0.98
SSBP2-207ENST00000507472 BTBD11A6QL63 1104 aa21.19■□□□□ 0.98
SSBP2-207ENST00000507472 SERPINB2P05120 415 aa21.19■□□□□ 0.98
SSBP2-207ENST00000507472 FMNL2Q96PY5 1086 aa21.19■□□□□ 0.98
SSBP2-207ENST00000507472 A0A087WZG4 1122 aa21.18■□□□□ 0.98
SSBP2-207ENST00000507472 UBR2Q8IWV8 1755 aa21.18■□□□□ 0.98
SSBP2-207ENST00000507472 A1BGP04217 495 aa21.17■□□□□ 0.98
SSBP2-207ENST00000507472 BICDL1Q6ZP65 573 aa21.17■□□□□ 0.98
SSBP2-207ENST00000507472 RTF1Q92541 710 aaKnown RBP21.17■□□□□ 0.98
SSBP2-207ENST00000507472 ZNF330Q9Y3S2 320 aaPredicted RBP21.17■□□□□ 0.98
SSBP2-207ENST00000507472 KIF3CO14782 793 aa21.16■□□□□ 0.98
SSBP2-207ENST00000507472 MCM10Q7L590 875 aa21.16■□□□□ 0.98
SSBP2-207ENST00000507472 TBC1D2BQ9UPU7 963 aa21.16■□□□□ 0.98
SSBP2-207ENST00000507472 IL6STP40189 918 aaPredicted RBP21.15■□□□□ 0.98
SSBP2-207ENST00000507472 C9orf131Q5VYM1 1079 aa21.15■□□□□ 0.98
SSBP2-207ENST00000507472 BRCA1P38398 1863 aaKnown RBP21.14■□□□□ 0.97
SSBP2-207ENST00000507472 DCTN1Q14203 1278 aa21.14■□□□□ 0.97
SSBP2-207ENST00000507472 TBC1D9BQ66K14 1250 aa21.14■□□□□ 0.97
SSBP2-207ENST00000507472 USP16Q9Y5T5 823 aa21.14■□□□□ 0.97
SSBP2-207ENST00000507472 NPM2Q86SE8 214 aaKnown RBP21.12■□□□□ 0.97
SSBP2-207ENST00000507472 SIPA1L3O60292 1781 aaPredicted RBP21.11■□□□□ 0.97
SSBP2-207ENST00000507472 PRAMEF22A3QJZ6 481 aa21.11■□□□□ 0.97
SSBP2-207ENST00000507472 HTATSF1O43719 755 aaKnown RBP21.11■□□□□ 0.97
SSBP2-207ENST00000507472 C2CD5Q86YS7 1000 aa21.11■□□□□ 0.97
SSBP2-207ENST00000507472 H0YIN7 160 aa21.1■□□□□ 0.97
SSBP2-207ENST00000507472 PIP4K2AP48426 406 aaPredicted RBP21.1■□□□□ 0.97
SSBP2-207ENST00000507472 AFDNP55196 1824 aaKnown RBP21.09■□□□□ 0.97
SSBP2-207ENST00000507472 CAMTA2O94983 1202 aa21.09■□□□□ 0.97
SSBP2-207ENST00000507472 SNRPA1P09661 255 aaKnown RBP21.09■□□□□ 0.97
SSBP2-207ENST00000507472 HSPA6P17066 643 aa21.09■□□□□ 0.97
SSBP2-207ENST00000507472 TTLL6Q8N841 843 aa21.09■□□□□ 0.97
SSBP2-207ENST00000507472 NMRK2Q9NPI5 230 aa21.09■□□□□ 0.97
SSBP2-207ENST00000507472 RNF181Q9P0P0 153 aa21.09■□□□□ 0.97
SSBP2-207ENST00000507472 CARMIL3Q8ND23 1372 aa21.09■□□□□ 0.97
SSBP2-207ENST00000507472 ARFGEF1Q9Y6D6 1849 aa21.08■□□□□ 0.97
SSBP2-207ENST00000507472 DZIP3Q86Y13 1208 aaKnown RBP21.08■□□□□ 0.97
SSBP2-207ENST00000507472 CCDC24Q8N4L8 307 aa21.08■□□□□ 0.97
SSBP2-207ENST00000507472 NRXN2Q9P2S2 1712 aa21.07■□□□□ 0.96
SSBP2-207ENST00000507472 TAF7Q15545 349 aaPredicted RBP21.07■□□□□ 0.96
SSBP2-207ENST00000507472 SETDB2Q96T68 719 aa21.07■□□□□ 0.96
SSBP2-207ENST00000507472 MIS18AQ9NYP9 233 aa21.07■□□□□ 0.96
SSBP2-207ENST00000507472 PRR5LQ6MZQ0 368 aa21.06■□□□□ 0.96
SSBP2-207ENST00000507472 BRIP1Q9BX63 1249 aa21.06■□□□□ 0.96
SSBP2-207ENST00000507472 TOMM70O94826 608 aa21.05■□□□□ 0.96
SSBP2-207ENST00000507472 NEFMP07197 916 aa21.05■□□□□ 0.96
SSBP2-207ENST00000507472 RASSF7Q02833 373 aa21.05■□□□□ 0.96
SSBP2-207ENST00000507472 PDE6BP35913 854 aa21.04■□□□□ 0.96
SSBP2-207ENST00000507472 ZNF622Q969S3 477 aaKnown RBP eCLIP21.04■□□□□ 0.963e-6■■□□□ 13.5
SSBP2-207ENST00000507472 PLEKHF1Q96S99 279 aa21.04■□□□□ 0.96
SSBP2-207ENST00000507472 NBPF26B4DH59 902 aa21.03■□□□□ 0.96
SSBP2-207ENST00000507472 NBPF10Q6P3W6 841 aaKnown RBP21.03■□□□□ 0.96
SSBP2-207ENST00000507472 NBPF15Q8N660 670 aa21.03■□□□□ 0.96
SSBP2-207ENST00000507472 NPHP1O15259 732 aa21.02■□□□□ 0.96
SSBP2-207ENST00000507472 PRELPP51888 382 aa21.02■□□□□ 0.96
SSBP2-207ENST00000507472 CNBD1Q8NA66 436 aa21.02■□□□□ 0.96
SSBP2-207ENST00000507472 PDZRN3Q9UPQ7 1066 aa21.02■□□□□ 0.96
SSBP2-207ENST00000507472 KDM2BQ8NHM5 1336 aa21.02■□□□□ 0.95
SSBP2-207ENST00000507472 LMNB1P20700 586 aa21.01■□□□□ 0.95
SSBP2-207ENST00000507472 CLEC4GQ6UXB4 293 aa21.01■□□□□ 0.95
SSBP2-207ENST00000507472 NFE2L2Q16236 605 aa21■□□□□ 0.95
SSBP2-207ENST00000507472 THUMPD2Q9BTF0 503 aaKnown RBP21■□□□□ 0.95
SSBP2-207ENST00000507472 NFKBIEO00221 500 aa20.99■□□□□ 0.95
SSBP2-207ENST00000507472 PNISRQ8TF01 805 aaKnown RBP20.99■□□□□ 0.95
SSBP2-207ENST00000507472 RRAGCQ9HB90 399 aa20.99■□□□□ 0.95
SSBP2-207ENST00000507472 ZNF219Q9P2Y4 722 aaPredicted RBP20.99■□□□□ 0.95
SSBP2-207ENST00000507472 ZNF652Q9Y2D9 606 aa20.99■□□□□ 0.95
SSBP2-207ENST00000507472 SCN7AQ01118 1682 aa20.99■□□□□ 0.95
SSBP2-207ENST00000507472 SBF1O95248 1867 aa20.98■□□□□ 0.95
SSBP2-207ENST00000507472 C21orf2O43822 256 aa20.98■□□□□ 0.95
SSBP2-207ENST00000507472 ST5P78524 1137 aa20.98■□□□□ 0.95
SSBP2-207ENST00000507472 NBPF5PQ86XG9 351 aaPredicted RBP20.98■□□□□ 0.95
SSBP2-207ENST00000507472 C16orf71Q8IYS4 520 aaPredicted RBP20.98■□□□□ 0.95
SSBP2-207ENST00000507472 PNNQ9H307 717 aaKnown RBP20.98■□□□□ 0.95
SSBP2-207ENST00000507472 SRGNP10124 158 aa20.97■□□□□ 0.95
SSBP2-207ENST00000507472 RBM46Q8TBY0 533 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 341.5 ms