RNA–Protein interactions for RNA: ENST00000507179.1

SKI-203, Transcript of SKI proto-oncogene, humanhuman

TSL 2

Gene SKI, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-203ENST00000507179 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
SKI-203ENST00000507179 UBR2Q8IWV8 1755 aa17.3■□□□□ 0.36
SKI-203ENST00000507179 CEP350Q5VT06 3117 aa17.3■□□□□ 0.36
SKI-203ENST00000507179 COL15A1P39059 1388 aa17.29■□□□□ 0.36
SKI-203ENST00000507179 ZPR1O75312 459 aa17.29■□□□□ 0.36
SKI-203ENST00000507179 NFIXQ14938 502 aa17.29■□□□□ 0.36
SKI-203ENST00000507179 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
SKI-203ENST00000507179 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
SKI-203ENST00000507179 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
SKI-203ENST00000507179 KCNQ3O43525 872 aa17.28■□□□□ 0.36
SKI-203ENST00000507179 CANXP27824 592 aaKnown RBP17.28■□□□□ 0.36
SKI-203ENST00000507179 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
SKI-203ENST00000507179 ZNF790Q6PG37 636 aa17.28■□□□□ 0.36
SKI-203ENST00000507179 GAS2L2Q8NHY3 880 aa17.28■□□□□ 0.36
SKI-203ENST00000507179 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
SKI-203ENST00000507179 KIF3CO14782 793 aa17.27■□□□□ 0.36
SKI-203ENST00000507179 PPP2R1AP30153 589 aa17.27■□□□□ 0.36
SKI-203ENST00000507179 PIM2Q9P1W9 311 aa17.27■□□□□ 0.36
SKI-203ENST00000507179 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
SKI-203ENST00000507179 TEFQ10587 303 aa17.26■□□□□ 0.35
SKI-203ENST00000507179 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
SKI-203ENST00000507179 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
SKI-203ENST00000507179 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
SKI-203ENST00000507179 SIPA1L3O60292 1781 aaPredicted RBP17.25■□□□□ 0.35
SKI-203ENST00000507179 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
SKI-203ENST00000507179 STARD3NLO95772 234 aa17.23■□□□□ 0.35
SKI-203ENST00000507179 SERPINB2P05120 415 aa17.23■□□□□ 0.35
SKI-203ENST00000507179 C9orf131Q5VYM1 1079 aa17.23■□□□□ 0.35
SKI-203ENST00000507179 CARMIL3Q8ND23 1372 aa17.23■□□□□ 0.35
SKI-203ENST00000507179 NRXN2Q9P2S2 1712 aa17.22■□□□□ 0.35
SKI-203ENST00000507179 A1BGP04217 495 aa17.22■□□□□ 0.35
SKI-203ENST00000507179 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
SKI-203ENST00000507179 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
SKI-203ENST00000507179 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
SKI-203ENST00000507179 AFDNP55196 1824 aaKnown RBP17.21■□□□□ 0.35
SKI-203ENST00000507179 PRAMEF22A3QJZ6 481 aa17.21■□□□□ 0.35
SKI-203ENST00000507179 BTBD11A6QL63 1104 aa17.21■□□□□ 0.35
SKI-203ENST00000507179 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
SKI-203ENST00000507179 MCM10Q7L590 875 aa17.21■□□□□ 0.35
SKI-203ENST00000507179 NMRK2Q9NPI5 230 aa17.21■□□□□ 0.35
SKI-203ENST00000507179 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.35
SKI-203ENST00000507179 ARFGEF1Q9Y6D6 1849 aa17.21■□□□□ 0.35
SKI-203ENST00000507179 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
SKI-203ENST00000507179 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
SKI-203ENST00000507179 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
SKI-203ENST00000507179 HSPA6P17066 643 aa17.19■□□□□ 0.34
SKI-203ENST00000507179 PIP4K2AP48426 406 aaPredicted RBP17.19■□□□□ 0.34
SKI-203ENST00000507179 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
SKI-203ENST00000507179 ZNF330Q9Y3S2 320 aaPredicted RBP17.19■□□□□ 0.34
SKI-203ENST00000507179 USP16Q9Y5T5 823 aa17.19■□□□□ 0.34
SKI-203ENST00000507179 A0A087WZG4 1122 aa17.18■□□□□ 0.34
SKI-203ENST00000507179 IL6STP40189 918 aaPredicted RBP17.18■□□□□ 0.34
SKI-203ENST00000507179 PRELPP51888 382 aa17.18■□□□□ 0.34
SKI-203ENST00000507179 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
SKI-203ENST00000507179 CAMTA2O94983 1202 aa17.17■□□□□ 0.34
SKI-203ENST00000507179 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
SKI-203ENST00000507179 RASSF7Q02833 373 aa17.17■□□□□ 0.34
SKI-203ENST00000507179 C2CD5Q86YS7 1000 aa17.16■□□□□ 0.34
SKI-203ENST00000507179 RNF181Q9P0P0 153 aa17.16■□□□□ 0.34
SKI-203ENST00000507179 SCN7AQ01118 1682 aa17.16■□□□□ 0.34
SKI-203ENST00000507179 PRR5LQ6MZQ0 368 aa17.14■□□□□ 0.33
SKI-203ENST00000507179 TTLL6Q8N841 843 aa17.14■□□□□ 0.33
SKI-203ENST00000507179 RTF1Q92541 710 aaKnown RBP17.14■□□□□ 0.33
SKI-203ENST00000507179 MIS18AQ9NYP9 233 aa17.14■□□□□ 0.33
SKI-203ENST00000507179 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
SKI-203ENST00000507179 H0YIN7 160 aa17.13■□□□□ 0.33
SKI-203ENST00000507179 TOMM70O94826 608 aa17.13■□□□□ 0.33
SKI-203ENST00000507179 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
SKI-203ENST00000507179 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
SKI-203ENST00000507179 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
SKI-203ENST00000507179 DLEC1Q9Y238 1755 aa17.12■□□□□ 0.33
SKI-203ENST00000507179 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
SKI-203ENST00000507179 HTATSF1O43719 755 aaKnown RBP17.12■□□□□ 0.33
SKI-203ENST00000507179 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
SKI-203ENST00000507179 DZIP3Q86Y13 1208 aaKnown RBP17.12■□□□□ 0.33
SKI-203ENST00000507179 BRIP1Q9BX63 1249 aa17.12■□□□□ 0.33
SKI-203ENST00000507179 NFKBIEO00221 500 aa17.11■□□□□ 0.33
SKI-203ENST00000507179 SBF1O95248 1867 aa17.11■□□□□ 0.33
SKI-203ENST00000507179 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
SKI-203ENST00000507179 RRAGCQ9HB90 399 aa17.1■□□□□ 0.33
SKI-203ENST00000507179 LMNB1P20700 586 aa17.09■□□□□ 0.33
SKI-203ENST00000507179 TAF7Q15545 349 aaPredicted RBP17.09■□□□□ 0.33
SKI-203ENST00000507179 ZNF622Q969S3 477 aaKnown RBP eCLIP17.09■□□□□ 0.33
SKI-203ENST00000507179 THUMPD2Q9BTF0 503 aaKnown RBP17.09■□□□□ 0.33
SKI-203ENST00000507179 COL11A2P13942 1736 aaPredicted RBP17.09■□□□□ 0.33
SKI-203ENST00000507179 BCORQ6W2J9 1755 aa17.08■□□□□ 0.33
SKI-203ENST00000507179 KDM2BQ8NHM5 1336 aa17.08■□□□□ 0.32
SKI-203ENST00000507179 C21orf2O43822 256 aa17.08■□□□□ 0.32
SKI-203ENST00000507179 PDE6BP35913 854 aa17.08■□□□□ 0.32
SKI-203ENST00000507179 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
SKI-203ENST00000507179 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
SKI-203ENST00000507179 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
SKI-203ENST00000507179 RBM46Q8TBY0 533 aaKnown RBP17.07■□□□□ 0.32
SKI-203ENST00000507179 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
SKI-203ENST00000507179 SRGNP10124 158 aa17.05■□□□□ 0.32
SKI-203ENST00000507179 APLP1P51693 650 aa17.05■□□□□ 0.32
SKI-203ENST00000507179 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
SKI-203ENST00000507179 HLFQ16534 295 aa17.05■□□□□ 0.32
SKI-203ENST00000507179 CLEC4GQ6UXB4 293 aa17.05■□□□□ 0.32
SKI-203ENST00000507179 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms