RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 PRDM15P57071 1507 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-213ENST00000506927 ZNF608Q9ULD9 1512 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-213ENST00000506927 COL17A1Q9UMD9 1497 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-213ENST00000506927 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-213ENST00000506927 ZNF787Q6DD87 383 aa7.58□□□□□ -1.2
CLDND1-213ENST00000506927 VASH1Q7L8A9 365 aaPredicted RBP7.58□□□□□ -1.2
CLDND1-213ENST00000506927 MAP4K5Q9Y4K4 846 aa7.58□□□□□ -1.2
CLDND1-213ENST00000506927 IQGAP3Q86VI3 1631 aa7.58□□□□□ -1.2
CLDND1-213ENST00000506927 ZBBXA8MT70 800 aa7.57□□□□□ -1.2
CLDND1-213ENST00000506927 NR5A1Q13285 461 aa7.57□□□□□ -1.2
CLDND1-213ENST00000506927 MCM6Q14566 821 aa7.57□□□□□ -1.2
CLDND1-213ENST00000506927 SLC10A4Q96EP9 437 aa7.57□□□□□ -1.2
CLDND1-213ENST00000506927 DACH1Q9UI36 760 aa7.57□□□□□ -1.2
CLDND1-213ENST00000506927 TBC1D2BQ9UPU7 963 aa7.57□□□□□ -1.2
CLDND1-213ENST00000506927 EIF5BO60841 1220 aaKnown RBP7.56□□□□□ -1.2
CLDND1-213ENST00000506927 NR3C2P08235 984 aa7.56□□□□□ -1.2
CLDND1-213ENST00000506927 FBXO45P0C2W1 286 aa7.56□□□□□ -1.2
CLDND1-213ENST00000506927 FSHRP23945 695 aa7.56□□□□□ -1.2
CLDND1-213ENST00000506927 KANK1Q14678 1352 aa7.56□□□□□ -1.2
CLDND1-213ENST00000506927 NEURL4Q96JN8 1562 aa7.55□□□□□ -1.2
CLDND1-213ENST00000506927 NEFMP07197 916 aa7.55□□□□□ -1.2
CLDND1-213ENST00000506927 BECN1Q14457 450 aa7.55□□□□□ -1.2
CLDND1-213ENST00000506927 EFCAB2Q5VUJ9 269 aa7.55□□□□□ -1.2
CLDND1-213ENST00000506927 DZIP3Q86Y13 1208 aaKnown RBP7.55□□□□□ -1.2
CLDND1-213ENST00000506927 EXOC6Q8TAG9 804 aa7.55□□□□□ -1.2
CLDND1-213ENST00000506927 ARHGAP5Q13017 1502 aa7.55□□□□□ -1.2
CLDND1-213ENST00000506927 CLASP1Q7Z460 1538 aa7.55□□□□□ -1.2
CLDND1-213ENST00000506927 PIK3C2GO75747 1445 aa7.54□□□□□ -1.2
CLDND1-213ENST00000506927 CAPN5O15484 640 aaPredicted RBP7.54□□□□□ -1.2
CLDND1-213ENST00000506927 HNRNPMP52272 730 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLDND1-213ENST00000506927 WDR4P57081 412 aaKnown RBP7.54□□□□□ -1.2
CLDND1-213ENST00000506927 KCTD15Q96SI1 283 aaPredicted RBP7.54□□□□□ -1.2
CLDND1-213ENST00000506927 KLF16Q9BXK1 252 aaPredicted RBP7.54□□□□□ -1.2
CLDND1-213ENST00000506927 PANK3Q9H999 370 aa7.54□□□□□ -1.2
CLDND1-213ENST00000506927 UPF2Q9HAU5 1272 aaKnown RBP7.54□□□□□ -1.2
CLDND1-213ENST00000506927 GDPD2Q9HCC8 539 aa7.54□□□□□ -1.2
CLDND1-213ENST00000506927 PRM3Q9NNZ6 103 aa7.54□□□□□ -1.2
CLDND1-213ENST00000506927 CDV3Q9UKY7 258 aaKnown RBP7.54□□□□□ -1.2
CLDND1-213ENST00000506927 MYO5CQ9NQX4 1742 aa7.54□□□□□ -1.2
CLDND1-213ENST00000506927 ZMYM3Q14202 1370 aa7.54□□□□□ -1.2
CLDND1-213ENST00000506927 SYNMO15061 1565 aa7.54□□□□□ -1.2
CLDND1-213ENST00000506927 MAPK8IP3Q9UPT6 1336 aa7.53□□□□□ -1.2
CLDND1-213ENST00000506927 RTEL1-TNFRSF6BF6WH68 1400 aa7.53□□□□□ -1.2
CLDND1-213ENST00000506927 KIAA1210Q9ULL0 1709 aa7.53□□□□□ -1.2
CLDND1-213ENST00000506927 E9PSI1 815 aa7.53□□□□□ -1.2
CLDND1-213ENST00000506927 TIMP2P16035 220 aa7.53□□□□□ -1.2
CLDND1-213ENST00000506927 NR1H3Q13133 447 aa7.53□□□□□ -1.2
CLDND1-213ENST00000506927 CGNL1Q0VF96 1302 aa7.52□□□□□ -1.2
CLDND1-213ENST00000506927 ARAP3Q8WWN8 1544 aa7.52□□□□□ -1.2
CLDND1-213ENST00000506927 CDC42BPBQ9Y5S2 1711 aa7.52□□□□□ -1.2
CLDND1-213ENST00000506927 SAMD9LQ8IVG5 1584 aa7.52□□□□□ -1.21
CLDND1-213ENST00000506927 MAGI2Q86UL8 1455 aa7.52□□□□□ -1.21
CLDND1-213ENST00000506927 POTECB2RU33 542 aa7.52□□□□□ -1.21
CLDND1-213ENST00000506927 IRF5Q13568 498 aa7.52□□□□□ -1.21
CLDND1-213ENST00000506927 PDE3AQ14432 1141 aa7.52□□□□□ -1.21
CLDND1-213ENST00000506927 ITPKCQ96DU7 683 aa7.52□□□□□ -1.21
CLDND1-213ENST00000506927 PCDHB9Q9Y5E1 797 aa7.52□□□□□ -1.21
CLDND1-213ENST00000506927 ASXL1Q8IXJ9 1541 aa7.52□□□□□ -1.21
CLDND1-213ENST00000506927 A2MP01023 1474 aa7.51□□□□□ -1.21
CLDND1-213ENST00000506927 SCAF11Q99590 1463 aaKnown RBP7.51□□□□□ -1.21
CLDND1-213ENST00000506927 ZIC2O95409 532 aaPredicted RBP7.51□□□□□ -1.21
CLDND1-213ENST00000506927 ABL2P42684 1182 aa7.51□□□□□ -1.21
CLDND1-213ENST00000506927 FLIIQ13045 1269 aa7.51□□□□□ -1.21
CLDND1-213ENST00000506927 NBPF20Q3BBV1 942 aa7.51□□□□□ -1.21
CLDND1-213ENST00000506927 INTS6LQ5JSJ4 861 aaKnown RBP7.51□□□□□ -1.21
CLDND1-213ENST00000506927 NPM2Q86SE8 214 aaKnown RBP7.51□□□□□ -1.21
CLDND1-213ENST00000506927 CCDC116Q8IYX3 515 aa7.51□□□□□ -1.21
CLDND1-213ENST00000506927 TESK2Q96S53 571 aa7.51□□□□□ -1.21
CLDND1-213ENST00000506927 ZFAND3Q9H8U3 227 aa7.51□□□□□ -1.21
CLDND1-213ENST00000506927 ATP13A2Q9NQ11 1180 aa7.51□□□□□ -1.21
CLDND1-213ENST00000506927 RNF17Q9BXT8 1623 aaKnown RBP7.51□□□□□ -1.21
CLDND1-213ENST00000506927 WDR7Q9Y4E6 1490 aa7.5□□□□□ -1.21
CLDND1-213ENST00000506927 CNGB1Q14028 1251 aaPredicted RBP7.5□□□□□ -1.21
CLDND1-213ENST00000506927 RGL3Q3MIN7 710 aa7.5□□□□□ -1.21
CLDND1-213ENST00000506927 CC2D1BQ5T0F9 858 aaKnown RBP7.5□□□□□ -1.21
CLDND1-213ENST00000506927 PMFBP1Q8TBY8 1022 aa7.5□□□□□ -1.21
CLDND1-213ENST00000506927 COG6Q9Y2V7 657 aa7.5□□□□□ -1.21
CLDND1-213ENST00000506927 NKTRP30414 1462 aaKnown RBP7.49□□□□□ -1.21
CLDND1-213ENST00000506927 SHROOM2Q13796 1616 aa7.49□□□□□ -1.21
CLDND1-213ENST00000506927 ABCC2Q92887 1545 aa7.49□□□□□ -1.21
CLDND1-213ENST00000506927 BMP1P13497 986 aa7.49□□□□□ -1.21
CLDND1-213ENST00000506927 PPP2R1AP30153 589 aa7.49□□□□□ -1.21
CLDND1-213ENST00000506927 RAB15P59190 212 aa7.49□□□□□ -1.21
CLDND1-213ENST00000506927 PPP1R26Q5T8A7 1209 aaPredicted RBP7.49□□□□□ -1.21
CLDND1-213ENST00000506927 POM121Q96HA1 1249 aa7.49□□□□□ -1.21
CLDND1-213ENST00000506927 PUS7Q96PZ0 661 aaKnown RBP7.49□□□□□ -1.21
CLDND1-213ENST00000506927 CRBNQ96SW2 442 aa7.49□□□□□ -1.21
CLDND1-213ENST00000506927 CHMP4BQ9H444 224 aaKnown RBP7.49□□□□□ -1.21
CLDND1-213ENST00000506927 GMPR2Q9P2T1 348 aaKnown RBP7.49□□□□□ -1.21
CLDND1-213ENST00000506927 EMILIN1Q9Y6C2 1016 aa7.49□□□□□ -1.21
CLDND1-213ENST00000506927 PLCH2O75038 1416 aa7.49□□□□□ -1.21
CLDND1-213ENST00000506927 TRPM2O94759 1503 aa7.48□□□□□ -1.21
CLDND1-213ENST00000506927 SYCP2Q9BX26 1530 aa7.48□□□□□ -1.21
CLDND1-213ENST00000506927 ESPNB1AK53 854 aa7.48□□□□□ -1.21
CLDND1-213ENST00000506927 GIGYF1O75420 1035 aaPredicted RBP7.48□□□□□ -1.21
CLDND1-213ENST00000506927 CT47B1P0C2W7 299 aaPredicted RBP7.48□□□□□ -1.21
CLDND1-213ENST00000506927 CANXP27824 592 aaKnown RBP7.48□□□□□ -1.21
CLDND1-213ENST00000506927 SLFN5Q08AF3 891 aa7.48□□□□□ -1.21
CLDND1-213ENST00000506927 L1TD1Q5T7N2 865 aaKnown RBP7.48□□□□□ -1.21
CLDND1-213ENST00000506927 TRIM46Q7Z4K8 759 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms