RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 LGR6Q9HBX8 967 aa7.6□□□□□ -1.19
USP46-206ENST00000506707 PLSCR1O15162 318 aa7.59□□□□□ -1.19
USP46-206ENST00000506707 HSP90AB1P08238 724 aaKnown RBP7.59□□□□□ -1.19
USP46-206ENST00000506707 WDR43Q15061 677 aaKnown RBP eCLIP7.59□□□□□ -1.19
USP46-206ENST00000506707 C1orf141Q5JVX7 400 aa7.59□□□□□ -1.19
USP46-206ENST00000506707 MPRIPQ6WCQ1 1025 aa7.59□□□□□ -1.19
USP46-206ENST00000506707 DEFB132Q7Z7B7 95 aa7.59□□□□□ -1.19
USP46-206ENST00000506707 IL17REQ8NFR9 667 aa7.59□□□□□ -1.19
USP46-206ENST00000506707 PIGBQ92521 554 aa7.59□□□□□ -1.19
USP46-206ENST00000506707 CAMKK2Q96RR4 588 aa7.59□□□□□ -1.19
USP46-206ENST00000506707 PNNQ9H307 717 aaKnown RBP7.59□□□□□ -1.19
USP46-206ENST00000506707 MRS2Q9HD23 443 aa7.59□□□□□ -1.19
USP46-206ENST00000506707 ERVV-2B6SEH9 535 aa7.58□□□□□ -1.2
USP46-206ENST00000506707 RNMTO43148 476 aaKnown RBP7.58□□□□□ -1.2
USP46-206ENST00000506707 EN1Q05925 392 aaPredicted RBP7.58□□□□□ -1.2
USP46-206ENST00000506707 SF3B2Q13435 895 aaKnown RBP7.58□□□□□ -1.2
USP46-206ENST00000506707 GAS2L2Q8NHY3 880 aa7.58□□□□□ -1.2
USP46-206ENST00000506707 SYTL4Q96C24 671 aaPredicted RBP7.58□□□□□ -1.2
USP46-206ENST00000506707 WNK3Q9BYP7 1800 aa7.57□□□□□ -1.2
USP46-206ENST00000506707 GNAT3A8MTJ3 354 aa7.57□□□□□ -1.2
USP46-206ENST00000506707 BAG6P46379 1132 aa7.57□□□□□ -1.2
USP46-206ENST00000506707 EZH2Q15910 746 aaKnown RBP7.57□□□□□ -1.2
USP46-206ENST00000506707 CCDC146Q8IYE0 955 aa7.57□□□□□ -1.2
USP46-206ENST00000506707 NFATC2IPQ8NCF5 419 aa7.57□□□□□ -1.2
USP46-206ENST00000506707 RUNDC1Q96C34 613 aa7.57□□□□□ -1.2
USP46-206ENST00000506707 KDM6AO15550 1401 aaPredicted RBP7.57□□□□□ -1.2
USP46-206ENST00000506707 PKD1L3Q7Z443 1732 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 SHANK3Q9BYB0 1731 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 CCER2I3L3R5 266 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 HTATSF1O43719 755 aaKnown RBP7.56□□□□□ -1.2
USP46-206ENST00000506707 NEFMP07197 916 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 TMPOP42166 694 aaKnown RBP7.56□□□□□ -1.2
USP46-206ENST00000506707 CABP4P57796 275 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 DCTN1Q14203 1278 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 NFE2L2Q16236 605 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 GPR153Q6NV75 609 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 SLC52A2Q9HAB3 445 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 ASAP1Q9ULH1 1129 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 MAP3K5Q99683 1374 aa7.56□□□□□ -1.2
USP46-206ENST00000506707 RIPK4P57078 832 aa7.55□□□□□ -1.2
USP46-206ENST00000506707 MCM10Q7L590 875 aa7.55□□□□□ -1.2
USP46-206ENST00000506707 MICALL2Q8IY33 904 aa7.55□□□□□ -1.2
USP46-206ENST00000506707 ATG3Q9NT62 314 aa7.55□□□□□ -1.2
USP46-206ENST00000506707 LRRC4BQ9NT99 713 aa7.55□□□□□ -1.2
USP46-206ENST00000506707 TMOD3Q9NYL9 352 aa7.55□□□□□ -1.2
USP46-206ENST00000506707 RRP7AQ9Y3A4 280 aaKnown RBP7.55□□□□□ -1.2
USP46-206ENST00000506707 CEMIPQ8WUJ3 1361 aa7.55□□□□□ -1.2
USP46-206ENST00000506707 MAPK8IP3Q9UPT6 1336 aa7.54□□□□□ -1.2
USP46-206ENST00000506707 APAF1O14727 1248 aa7.54□□□□□ -1.2
USP46-206ENST00000506707 NEUROD2Q15784 382 aa7.54□□□□□ -1.2
USP46-206ENST00000506707 TXNRD1Q16881 649 aa7.54□□□□□ -1.2
USP46-206ENST00000506707 TMEM92Q6UXU6 159 aa7.54□□□□□ -1.2
USP46-206ENST00000506707 FAM9BQ8IZU0 186 aa7.54□□□□□ -1.2
USP46-206ENST00000506707 RTF1Q92541 710 aaKnown RBP7.54□□□□□ -1.2
USP46-206ENST00000506707 KCNQ4P56696 695 aa7.53□□□□□ -1.2
USP46-206ENST00000506707 SLC39A6Q13433 755 aa7.53□□□□□ -1.2
USP46-206ENST00000506707 ANKRD13DQ6ZTN6 518 aa7.53□□□□□ -1.2
USP46-206ENST00000506707 EFCAB3Q8N7B9 438 aa7.53□□□□□ -1.2
USP46-206ENST00000506707 SMARCC1Q92922 1105 aaPredicted RBP7.53□□□□□ -1.2
USP46-206ENST00000506707 SLC4A9Q96Q91 983 aa7.53□□□□□ -1.2
USP46-206ENST00000506707 THUMPD2Q9BTF0 503 aaKnown RBP7.53□□□□□ -1.2
USP46-206ENST00000506707 CIZ1Q9ULV3 898 aaPredicted RBP7.53□□□□□ -1.2
USP46-206ENST00000506707 PALLDQ8WX93 1383 aa7.52□□□□□ -1.21
USP46-206ENST00000506707 SENP3-EIF4A1A0A087X0R7 540 aa7.52□□□□□ -1.21
USP46-206ENST00000506707 LOC102724428A0A0B4J2F2 783 aa7.52□□□□□ -1.21
USP46-206ENST00000506707 SIK1P57059 783 aa7.52□□□□□ -1.21
USP46-206ENST00000506707 TEFQ10587 303 aa7.52□□□□□ -1.21
USP46-206ENST00000506707 TAF7Q15545 349 aaPredicted RBP7.52□□□□□ -1.21
USP46-206ENST00000506707 SLC27A3Q5K4L6 730 aa7.52□□□□□ -1.21
USP46-206ENST00000506707 SBF2Q86WG5 1849 aa7.52□□□□□ -1.21
USP46-206ENST00000506707 NHSQ6T4R5 1651 aa7.51□□□□□ -1.21
USP46-206ENST00000506707 BTBD11A6QL63 1104 aa7.51□□□□□ -1.21
USP46-206ENST00000506707 KCNQ3O43525 872 aa7.51□□□□□ -1.21
USP46-206ENST00000506707 PTCD1O75127 700 aaKnown RBP7.51□□□□□ -1.21
USP46-206ENST00000506707 ITPK1Q13572 414 aa7.51□□□□□ -1.21
USP46-206ENST00000506707 ZNF790Q6PG37 636 aa7.51□□□□□ -1.21
USP46-206ENST00000506707 SPOCK2Q92563 424 aa7.51□□□□□ -1.21
USP46-206ENST00000506707 MIS18AQ9NYP9 233 aa7.51□□□□□ -1.21
USP46-206ENST00000506707 CCNL1Q9UK58 526 aaPredicted RBP7.51□□□□□ -1.21
USP46-206ENST00000506707 TNS1Q9HBL0 1735 aaKnown RBP7.51□□□□□ -1.21
USP46-206ENST00000506707 TOGARAM1Q9Y4F4 1720 aa7.51□□□□□ -1.21
USP46-206ENST00000506707 ADAMTS7Q9UKP4 1686 aa7.51□□□□□ -1.21
USP46-206ENST00000506707 MRC1P22897 1456 aa7.5□□□□□ -1.21
USP46-206ENST00000506707 ATP6V1AP38606 617 aa7.5□□□□□ -1.21
USP46-206ENST00000506707 LSM11P83369 360 aaKnown RBP eCLIP7.5□□□□□ -1.21
USP46-206ENST00000506707 LMOD3Q0VAK6 560 aa7.5□□□□□ -1.21
USP46-206ENST00000506707 CCDC27Q2M243 656 aa7.5□□□□□ -1.21
USP46-206ENST00000506707 ZNF496Q96IT1 587 aaPredicted RBP7.5□□□□□ -1.21
USP46-206ENST00000506707 ANO8Q9HCE9 1232 aaPredicted RBP7.5□□□□□ -1.21
USP46-206ENST00000506707 DOT1LQ8TEK3 1739 aa7.49□□□□□ -1.21
USP46-206ENST00000506707 CHL1O00533 1208 aa7.49□□□□□ -1.21
USP46-206ENST00000506707 ZNF853P0CG23 659 aa7.49□□□□□ -1.21
USP46-206ENST00000506707 SLC15A2Q16348 729 aa7.49□□□□□ -1.21
USP46-206ENST00000506707 NBPF14Q5TI25 921 aa7.49□□□□□ -1.21
USP46-206ENST00000506707 WWC1Q8IX03 1113 aa7.49□□□□□ -1.21
USP46-206ENST00000506707 LINC00116Q8NCU8 138 aa7.49□□□□□ -1.21
USP46-206ENST00000506707 PLA2G2EQ9NZK7 142 aa7.49□□□□□ -1.21
USP46-206ENST00000506707 BTAF1O14981 1849 aa7.48□□□□□ -1.21
USP46-206ENST00000506707 EIF4A1P60842 406 aaKnown RBP7.48□□□□□ -1.21
USP46-206ENST00000506707 ZNF827Q17R98 1081 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms