RNA–Protein interactions for RNA: ENST00000506696.1

SNCB-203, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNCB, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-203ENST00000506696 KCNQ3O43525 872 aa18.47■□□□□ 0.55
SNCB-203ENST00000506696 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
SNCB-203ENST00000506696 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNCB-203ENST00000506696 TTC5Q8N0Z6 440 aa18.47■□□□□ 0.55
SNCB-203ENST00000506696 ZNF496Q96IT1 587 aaPredicted RBP18.47■□□□□ 0.55
SNCB-203ENST00000506696 SENP3-EIF4A1A0A087X0R7 540 aa18.46■□□□□ 0.55
SNCB-203ENST00000506696 ZPR1O75312 459 aa18.46■□□□□ 0.55
SNCB-203ENST00000506696 POLRMTO00411 1230 aaKnown RBP18.45■□□□□ 0.54
SNCB-203ENST00000506696 CHRNA5P30532 468 aa18.45■□□□□ 0.54
SNCB-203ENST00000506696 TGFB2P61812 414 aa18.45■□□□□ 0.54
SNCB-203ENST00000506696 BCL2L12Q9HB09 334 aa18.45■□□□□ 0.54
SNCB-203ENST00000506696 ZNF330Q9Y3S2 320 aaPredicted RBP18.45■□□□□ 0.54
SNCB-203ENST00000506696 BRCA1P38398 1863 aaKnown RBP18.44■□□□□ 0.54
SNCB-203ENST00000506696 FCHSD2O94868 740 aa18.44■□□□□ 0.54
SNCB-203ENST00000506696 KCNA3P22001 575 aa18.44■□□□□ 0.54
SNCB-203ENST00000506696 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
SNCB-203ENST00000506696 MCM10Q7L590 875 aa18.44■□□□□ 0.54
SNCB-203ENST00000506696 CEMIPQ8WUJ3 1361 aa18.43■□□□□ 0.54
SNCB-203ENST00000506696 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
SNCB-203ENST00000506696 TM4SF1P30408 202 aa18.43■□□□□ 0.54
SNCB-203ENST00000506696 DCTN1Q14203 1278 aa18.43■□□□□ 0.54
SNCB-203ENST00000506696 NFIXQ14938 502 aa18.43■□□□□ 0.54
SNCB-203ENST00000506696 VSIG10Q8N0Z9 540 aa18.43■□□□□ 0.54
SNCB-203ENST00000506696 NARFQ9UHQ1 456 aa18.43■□□□□ 0.54
SNCB-203ENST00000506696 PIP4K2AP48426 406 aaPredicted RBP18.42■□□□□ 0.54
SNCB-203ENST00000506696 BICDL1Q6ZP65 573 aa18.42■□□□□ 0.54
SNCB-203ENST00000506696 ARHGAP27Q6ZUM4 889 aa18.42■□□□□ 0.54
SNCB-203ENST00000506696 GPBP1L1Q9HC44 474 aaPredicted RBP18.42■□□□□ 0.54
SNCB-203ENST00000506696 NUDCQ9Y266 331 aa18.42■□□□□ 0.54
SNCB-203ENST00000506696 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
SNCB-203ENST00000506696 PRAMEF22A3QJZ6 481 aa18.41■□□□□ 0.54
SNCB-203ENST00000506696 CARMIL3Q8ND23 1372 aa18.41■□□□□ 0.54
SNCB-203ENST00000506696 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
SNCB-203ENST00000506696 STARD3NLO95772 234 aa18.4■□□□□ 0.54
SNCB-203ENST00000506696 SCN7AQ01118 1682 aa18.4■□□□□ 0.54
SNCB-203ENST00000506696 A1BGP04217 495 aa18.39■□□□□ 0.53
SNCB-203ENST00000506696 EIF5P55010 431 aaKnown RBP18.39■□□□□ 0.53
SNCB-203ENST00000506696 FMNL2Q96PY5 1086 aa18.39■□□□□ 0.53
SNCB-203ENST00000506696 CEP350Q5VT06 3117 aa18.38■□□□□ 0.53
SNCB-203ENST00000506696 CCDC24Q8N4L8 307 aa18.38■□□□□ 0.53
SNCB-203ENST00000506696 TBC1D2BQ9UPU7 963 aa18.38■□□□□ 0.53
SNCB-203ENST00000506696 NRXN2Q9P2S2 1712 aa18.37■□□□□ 0.53
SNCB-203ENST00000506696 DALRD3Q5D0E6 543 aaKnown RBP18.37■□□□□ 0.53
SNCB-203ENST00000506696 PIM2Q9P1W9 311 aa18.37■□□□□ 0.53
SNCB-203ENST00000506696 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
SNCB-203ENST00000506696 SERPINB2P05120 415 aa18.36■□□□□ 0.53
SNCB-203ENST00000506696 TBC1D9BQ66K14 1250 aa18.36■□□□□ 0.53
SNCB-203ENST00000506696 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
SNCB-203ENST00000506696 MIS18AQ9NYP9 233 aa18.36■□□□□ 0.53
SNCB-203ENST00000506696 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
SNCB-203ENST00000506696 C9orf131Q5VYM1 1079 aa18.33■□□□□ 0.52
SNCB-203ENST00000506696 THUMPD2Q9BTF0 503 aaKnown RBP18.33■□□□□ 0.52
SNCB-203ENST00000506696 DLG5Q8TDM6 1919 aa18.32■□□□□ 0.52
SNCB-203ENST00000506696 A0A087WZG4 1122 aa18.32■□□□□ 0.52
SNCB-203ENST00000506696 IL6STP40189 918 aaPredicted RBP18.32■□□□□ 0.52
SNCB-203ENST00000506696 RASSF7Q02833 373 aa18.32■□□□□ 0.52
SNCB-203ENST00000506696 C2CD5Q86YS7 1000 aa18.32■□□□□ 0.52
SNCB-203ENST00000506696 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
SNCB-203ENST00000506696 ANKRD31Q8N7Z5 1873 aa18.32■□□□□ 0.52
SNCB-203ENST00000506696 BCORQ6W2J9 1755 aa18.32■□□□□ 0.52
SNCB-203ENST00000506696 COL11A2P13942 1736 aaPredicted RBP18.32■□□□□ 0.52
SNCB-203ENST00000506696 KIF3CO14782 793 aa18.31■□□□□ 0.52
SNCB-203ENST00000506696 CAMTA2O94983 1202 aa18.31■□□□□ 0.52
SNCB-203ENST00000506696 DLEC1Q9Y238 1755 aa18.31■□□□□ 0.52
SNCB-203ENST00000506696 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
SNCB-203ENST00000506696 RNF181Q9P0P0 153 aa18.3■□□□□ 0.52
SNCB-203ENST00000506696 PRR5LQ6MZQ0 368 aa18.29■□□□□ 0.52
SNCB-203ENST00000506696 DZIP3Q86Y13 1208 aaKnown RBP18.29■□□□□ 0.52
SNCB-203ENST00000506696 PLEKHF1Q96S99 279 aa18.29■□□□□ 0.52
SNCB-203ENST00000506696 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
SNCB-203ENST00000506696 NBPF26B4DH59 902 aa18.28■□□□□ 0.52
SNCB-203ENST00000506696 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
SNCB-203ENST00000506696 PRELPP51888 382 aa18.28■□□□□ 0.52
SNCB-203ENST00000506696 NBPF10Q6P3W6 841 aaKnown RBP18.28■□□□□ 0.52
SNCB-203ENST00000506696 NBPF15Q8N660 670 aa18.28■□□□□ 0.52
SNCB-203ENST00000506696 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.52
SNCB-203ENST00000506696 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
SNCB-203ENST00000506696 NPM2Q86SE8 214 aaKnown RBP18.27■□□□□ 0.52
SNCB-203ENST00000506696 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.51
SNCB-203ENST00000506696 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
SNCB-203ENST00000506696 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
SNCB-203ENST00000506696 LAMB4A4D0S4 1761 aa18.26■□□□□ 0.51
SNCB-203ENST00000506696 H0YIN7 160 aa18.25■□□□□ 0.51
SNCB-203ENST00000506696 TTLL6Q8N841 843 aa18.25■□□□□ 0.51
SNCB-203ENST00000506696 CNBD1Q8NA66 436 aa18.25■□□□□ 0.51
SNCB-203ENST00000506696 ZNF622Q969S3 477 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNCB-203ENST00000506696 SETDB2Q96T68 719 aa18.25■□□□□ 0.51
SNCB-203ENST00000506696 MAPK8IP3Q9UPT6 1336 aa18.24■□□□□ 0.51
SNCB-203ENST00000506696 FAM177BA6PVY3 158 aa18.24■□□□□ 0.51
SNCB-203ENST00000506696 NPHP1O15259 732 aa18.24■□□□□ 0.51
SNCB-203ENST00000506696 NEFMP07197 916 aa18.24■□□□□ 0.51
SNCB-203ENST00000506696 NGEFQ8N5V2 710 aa18.24■□□□□ 0.51
SNCB-203ENST00000506696 SBF1O95248 1867 aa18.24■□□□□ 0.51
SNCB-203ENST00000506696 CACNA1SQ13698 1873 aa18.22■□□□□ 0.51
SNCB-203ENST00000506696 NFKBIEO00221 500 aa18.22■□□□□ 0.51
SNCB-203ENST00000506696 BRIP1Q9BX63 1249 aa18.22■□□□□ 0.51
SNCB-203ENST00000506696 TIAM2Q8IVF5 1701 aa18.21■□□□□ 0.51
SNCB-203ENST00000506696 C21orf2O43822 256 aa18.21■□□□□ 0.51
SNCB-203ENST00000506696 HSPA6P17066 643 aa18.21■□□□□ 0.51
SNCB-203ENST00000506696 HLFQ16534 295 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms