RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 PLEKHF1Q96S99 279 aa18.46■□□□□ 0.55
SNHG4-203ENST00000506188 SRP68Q9UHB9 627 aaKnown RBP18.46■□□□□ 0.55
SNHG4-203ENST00000506188 IL6STP40189 918 aaPredicted RBP18.45■□□□□ 0.54
SNHG4-203ENST00000506188 PRKRIP1Q9H875 184 aaPredicted RBP18.45■□□□□ 0.54
SNHG4-203ENST00000506188 COL15A1P39059 1388 aa18.44■□□□□ 0.54
SNHG4-203ENST00000506188 RIPK4P57078 832 aa18.44■□□□□ 0.54
SNHG4-203ENST00000506188 FKBP8Q14318 412 aa18.44■□□□□ 0.54
SNHG4-203ENST00000506188 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
SNHG4-203ENST00000506188 UBR3Q6ZT12 1888 aa18.43■□□□□ 0.54
SNHG4-203ENST00000506188 KCPQ6ZWJ8 1503 aa18.43■□□□□ 0.54
SNHG4-203ENST00000506188 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
SNHG4-203ENST00000506188 EIF5P55010 431 aaKnown RBP18.42■□□□□ 0.54
SNHG4-203ENST00000506188 ADAMTS7Q9UKP4 1686 aa18.41■□□□□ 0.54
SNHG4-203ENST00000506188 NPHP1O15259 732 aa18.41■□□□□ 0.54
SNHG4-203ENST00000506188 KCNQ3O43525 872 aa18.41■□□□□ 0.54
SNHG4-203ENST00000506188 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
SNHG4-203ENST00000506188 COL24A1Q17RW2 1714 aa18.4■□□□□ 0.54
SNHG4-203ENST00000506188 A1BGP04217 495 aa18.39■□□□□ 0.53
SNHG4-203ENST00000506188 TM4SF1P30408 202 aa18.39■□□□□ 0.53
SNHG4-203ENST00000506188 TMPOP42166 694 aaKnown RBP18.39■□□□□ 0.53
SNHG4-203ENST00000506188 BABAM1Q9NWV8 329 aa18.39■□□□□ 0.53
SNHG4-203ENST00000506188 MIS18AQ9NYP9 233 aa18.39■□□□□ 0.53
SNHG4-203ENST00000506188 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
SNHG4-203ENST00000506188 USP16Q9Y5T5 823 aa18.39■□□□□ 0.53
SNHG4-203ENST00000506188 A0A0G2JLW4 131 aa18.38■□□□□ 0.53
SNHG4-203ENST00000506188 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNHG4-203ENST00000506188 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
SNHG4-203ENST00000506188 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
SNHG4-203ENST00000506188 TBC1D2BQ9UPU7 963 aa18.38■□□□□ 0.53
SNHG4-203ENST00000506188 POLRMTO00411 1230 aaKnown RBP18.37■□□□□ 0.53
SNHG4-203ENST00000506188 SERPINB2P05120 415 aa18.37■□□□□ 0.53
SNHG4-203ENST00000506188 NFIXQ14938 502 aa18.37■□□□□ 0.53
SNHG4-203ENST00000506188 BICDL1Q6ZP65 573 aa18.37■□□□□ 0.53
SNHG4-203ENST00000506188 DZIP3Q86Y13 1208 aaKnown RBP18.37■□□□□ 0.53
SNHG4-203ENST00000506188 SETDB2Q96T68 719 aa18.37■□□□□ 0.53
SNHG4-203ENST00000506188 PIM2Q9P1W9 311 aa18.37■□□□□ 0.53
SNHG4-203ENST00000506188 ADAMTS8Q9UP79 889 aa18.37■□□□□ 0.53
SNHG4-203ENST00000506188 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
SNHG4-203ENST00000506188 COL5A3P25940 1745 aaPredicted RBP18.37■□□□□ 0.53
SNHG4-203ENST00000506188 ANP32CO43423 234 aa18.36■□□□□ 0.53
SNHG4-203ENST00000506188 DDR1Q08345 913 aa18.36■□□□□ 0.53
SNHG4-203ENST00000506188 CCDC146Q8IYE0 955 aa18.36■□□□□ 0.53
SNHG4-203ENST00000506188 CICQ96RK0 1608 aaPredicted RBP18.36■□□□□ 0.53
SNHG4-203ENST00000506188 WWC3Q9ULE0 1092 aa18.36■□□□□ 0.53
SNHG4-203ENST00000506188 DPEP1P16444 411 aa18.35■□□□□ 0.53
SNHG4-203ENST00000506188 THUMPD2Q9BTF0 503 aaKnown RBP18.35■□□□□ 0.53
SNHG4-203ENST00000506188 PDZRN3Q9UPQ7 1066 aa18.35■□□□□ 0.53
SNHG4-203ENST00000506188 TJP1Q07157 1748 aa18.35■□□□□ 0.53
SNHG4-203ENST00000506188 C10orf71Q711Q0 1435 aa18.34■□□□□ 0.53
SNHG4-203ENST00000506188 EIF4A1P60842 406 aaKnown RBP18.34■□□□□ 0.53
SNHG4-203ENST00000506188 CALD1Q05682 793 aaKnown RBP18.34■□□□□ 0.53
SNHG4-203ENST00000506188 DALRD3Q5D0E6 543 aaKnown RBP18.34■□□□□ 0.53
SNHG4-203ENST00000506188 CLEC4GQ6UXB4 293 aa18.34■□□□□ 0.53
SNHG4-203ENST00000506188 GIGYF1O75420 1035 aaPredicted RBP18.33■□□□□ 0.52
SNHG4-203ENST00000506188 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
SNHG4-203ENST00000506188 H0YIN7 160 aa18.32■□□□□ 0.52
SNHG4-203ENST00000506188 RGL2O15211 777 aa18.32■□□□□ 0.52
SNHG4-203ENST00000506188 ARHGAP27Q6ZUM4 889 aa18.32■□□□□ 0.52
SNHG4-203ENST00000506188 ZNF784Q8NCA9 323 aaPredicted RBP18.32■□□□□ 0.52
SNHG4-203ENST00000506188 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
SNHG4-203ENST00000506188 PRAMEF22A3QJZ6 481 aa18.31■□□□□ 0.52
SNHG4-203ENST00000506188 PDE6BP35913 854 aa18.31■□□□□ 0.52
SNHG4-203ENST00000506188 ST5P78524 1137 aa18.31■□□□□ 0.52
SNHG4-203ENST00000506188 TBC1D9BQ66K14 1250 aa18.31■□□□□ 0.52
SNHG4-203ENST00000506188 KIF6Q6ZMV9 814 aa18.31■□□□□ 0.52
SNHG4-203ENST00000506188 LAS1LQ9Y4W2 734 aaKnown RBP18.31■□□□□ 0.52
SNHG4-203ENST00000506188 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
SNHG4-203ENST00000506188 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
SNHG4-203ENST00000506188 CNBD1Q8NA66 436 aa18.3■□□□□ 0.52
SNHG4-203ENST00000506188 PXDNLA1KZ92 1463 aa18.3■□□□□ 0.52
SNHG4-203ENST00000506188 C4AP0C0L4 1744 aa18.29■□□□□ 0.52
SNHG4-203ENST00000506188 ERBB4Q15303 1308 aa18.29■□□□□ 0.52
SNHG4-203ENST00000506188 GTF2E1P29083 439 aaPredicted RBP18.29■□□□□ 0.52
SNHG4-203ENST00000506188 PIP4K2AP48426 406 aaPredicted RBP18.29■□□□□ 0.52
SNHG4-203ENST00000506188 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
SNHG4-203ENST00000506188 BRIP1Q9BX63 1249 aa18.29■□□□□ 0.52
SNHG4-203ENST00000506188 MYH14Q7Z406 1995 aaKnown RBP18.29■□□□□ 0.52
SNHG4-203ENST00000506188 UBR2Q8IWV8 1755 aa18.29■□□□□ 0.52
SNHG4-203ENST00000506188 TPTE2Q6XPS3 522 aa18.28■□□□□ 0.52
SNHG4-203ENST00000506188 NBPF5PQ86XG9 351 aaPredicted RBP18.28■□□□□ 0.52
SNHG4-203ENST00000506188 C2CD5Q86YS7 1000 aa18.28■□□□□ 0.52
SNHG4-203ENST00000506188 NBPF26B4DH59 902 aa18.27■□□□□ 0.52
SNHG4-203ENST00000506188 MYL6BP14649 208 aa18.27■□□□□ 0.52
SNHG4-203ENST00000506188 EIF2S2P20042 333 aaKnown RBP18.27■□□□□ 0.52
SNHG4-203ENST00000506188 CHRNA5P30532 468 aa18.27■□□□□ 0.52
SNHG4-203ENST00000506188 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.52
SNHG4-203ENST00000506188 NBPF15Q8N660 670 aa18.27■□□□□ 0.52
SNHG4-203ENST00000506188 CHMP4AQ9BY43 222 aa18.27■□□□□ 0.52
SNHG4-203ENST00000506188 ERVV-1B6SEH8 477 aa18.26■□□□□ 0.51
SNHG4-203ENST00000506188 TTLL6Q8N841 843 aa18.26■□□□□ 0.51
SNHG4-203ENST00000506188 NIP7Q9Y221 180 aaKnown RBP eCLIP18.26■□□□□ 0.511e-323■■□□□ 14.4
SNHG4-203ENST00000506188 CHL1O00533 1208 aa18.25■□□□□ 0.51
SNHG4-203ENST00000506188 APAF1O14727 1248 aa18.25■□□□□ 0.51
SNHG4-203ENST00000506188 KCNA3P22001 575 aa18.25■□□□□ 0.51
SNHG4-203ENST00000506188 MRS2Q9HD23 443 aa18.25■□□□□ 0.51
SNHG4-203ENST00000506188 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
SNHG4-203ENST00000506188 PRR5LQ6MZQ0 368 aa18.24■□□□□ 0.51
SNHG4-203ENST00000506188 ZNF622Q969S3 477 aaKnown RBP eCLIP18.24■□□□□ 0.51
SNHG4-203ENST00000506188 CFAP44Q96MT7 982 aa18.24■□□□□ 0.51
SNHG4-203ENST00000506188 NYXQ9GZU5 481 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms