RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 NLGN1Q8N2Q7 840 aa15.04■□□□□ -0
KDM3B-203ENST00000505756 PNISRQ8TF01 805 aaKnown RBP15.04■□□□□ -0
KDM3B-203ENST00000505756 RUNDC1Q96C34 613 aa15.04■□□□□ -0
KDM3B-203ENST00000505756 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
KDM3B-203ENST00000505756 LMOD3Q0VAK6 560 aa15.03■□□□□ -0
KDM3B-203ENST00000505756 CCDC146Q8IYE0 955 aa15.03■□□□□ -0
KDM3B-203ENST00000505756 KLHL34Q8N239 644 aa15.03■□□□□ -0
KDM3B-203ENST00000505756 ZBTB1Q9Y2K1 713 aa15.03■□□□□ -0
KDM3B-203ENST00000505756 USP42Q9H9J4 1324 aaKnown RBP15.02■□□□□ -0
KDM3B-203ENST00000505756 GYS1P13807 737 aa15.02■□□□□ -0
KDM3B-203ENST00000505756 COL15A1P39059 1388 aa15.01□□□□□ -0.01
KDM3B-203ENST00000505756 THUMPD2Q9BTF0 503 aaKnown RBP15.01□□□□□ -0.01
KDM3B-203ENST00000505756 MMP10P09238 476 aa15□□□□□ -0.01
KDM3B-203ENST00000505756 SNRPA1P09661 255 aaKnown RBP15□□□□□ -0.01
KDM3B-203ENST00000505756 CANXP27824 592 aaKnown RBP15□□□□□ -0.01
KDM3B-203ENST00000505756 MIS18AQ9NYP9 233 aa15□□□□□ -0.01
KDM3B-203ENST00000505756 CD2APQ9Y5K6 639 aa15□□□□□ -0.01
KDM3B-203ENST00000505756 KDM3BQ7LBC6 1761 aa14.99□□□□□ -0.01
KDM3B-203ENST00000505756 ZPR1O75312 459 aa14.99□□□□□ -0.01
KDM3B-203ENST00000505756 EIF5P55010 431 aaKnown RBP14.99□□□□□ -0.01
KDM3B-203ENST00000505756 SRP68Q9UHB9 627 aaKnown RBP14.99□□□□□ -0.01
KDM3B-203ENST00000505756 NARFQ9UHQ1 456 aa14.99□□□□□ -0.01
KDM3B-203ENST00000505756 RRP7AQ9Y3A4 280 aaKnown RBP14.99□□□□□ -0.01
KDM3B-203ENST00000505756 A0A087WZG4 1122 aa14.98□□□□□ -0.01
KDM3B-203ENST00000505756 IL6STP40189 918 aaPredicted RBP14.98□□□□□ -0.01
KDM3B-203ENST00000505756 NEUROD2Q15784 382 aa14.98□□□□□ -0.01
KDM3B-203ENST00000505756 USPL1Q5W0Q7 1092 aa14.98□□□□□ -0.01
KDM3B-203ENST00000505756 NLGN2Q8NFZ4 835 aa14.98□□□□□ -0.01
KDM3B-203ENST00000505756 BABAM1Q9NWV8 329 aa14.98□□□□□ -0.01
KDM3B-203ENST00000505756 USP16Q9Y5T5 823 aa14.98□□□□□ -0.01
KDM3B-203ENST00000505756 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
KDM3B-203ENST00000505756 FKBP8Q14318 412 aa14.97□□□□□ -0.01
KDM3B-203ENST00000505756 CCDC184Q52MB2 194 aa14.97□□□□□ -0.01
KDM3B-203ENST00000505756 PARP3Q9Y6F1 533 aa14.97□□□□□ -0.01
KDM3B-203ENST00000505756 A1BGP04217 495 aa14.96□□□□□ -0.01
KDM3B-203ENST00000505756 EIF4A1P60842 406 aaKnown RBP14.96□□□□□ -0.01
KDM3B-203ENST00000505756 NPM2Q86SE8 214 aaKnown RBP14.96□□□□□ -0.01
KDM3B-203ENST00000505756 TSPYL4Q9UJ04 414 aa14.96□□□□□ -0.01
KDM3B-203ENST00000505756 TRIM35Q9UPQ4 493 aa14.96□□□□□ -0.01
KDM3B-203ENST00000505756 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
KDM3B-203ENST00000505756 ZNF330Q9Y3S2 320 aaPredicted RBP14.95□□□□□ -0.02
KDM3B-203ENST00000505756 LAMB4A4D0S4 1761 aa14.95□□□□□ -0.02
KDM3B-203ENST00000505756 GIGYF1O75420 1035 aaPredicted RBP14.94□□□□□ -0.02
KDM3B-203ENST00000505756 C10orf71Q711Q0 1435 aa14.93□□□□□ -0.02
KDM3B-203ENST00000505756 APAF1O14727 1248 aa14.93□□□□□ -0.02
KDM3B-203ENST00000505756 TM4SF1P30408 202 aa14.93□□□□□ -0.02
KDM3B-203ENST00000505756 DDR1Q08345 913 aa14.93□□□□□ -0.02
KDM3B-203ENST00000505756 GPR162Q16538 588 aa14.93□□□□□ -0.02
KDM3B-203ENST00000505756 BCL2L12Q9HB09 334 aa14.93□□□□□ -0.02
KDM3B-203ENST00000505756 SCN7AQ01118 1682 aa14.93□□□□□ -0.02
KDM3B-203ENST00000505756 KIF13BQ9NQT8 1826 aa14.92□□□□□ -0.02
KDM3B-203ENST00000505756 POLRMTO00411 1230 aaKnown RBP14.92□□□□□ -0.02
KDM3B-203ENST00000505756 TBC1D2BQ9UPU7 963 aa14.92□□□□□ -0.02
KDM3B-203ENST00000505756 NBPF26B4DH59 902 aa14.91□□□□□ -0.02
KDM3B-203ENST00000505756 CHL1O00533 1208 aa14.91□□□□□ -0.02
KDM3B-203ENST00000505756 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
KDM3B-203ENST00000505756 TGFB2P61812 414 aa14.91□□□□□ -0.02
KDM3B-203ENST00000505756 NFIXQ14938 502 aa14.91□□□□□ -0.02
KDM3B-203ENST00000505756 NBPF10Q6P3W6 841 aaKnown RBP14.91□□□□□ -0.02
KDM3B-203ENST00000505756 DZIP3Q86Y13 1208 aaKnown RBP14.91□□□□□ -0.02
KDM3B-203ENST00000505756 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
KDM3B-203ENST00000505756 NBPF15Q8N660 670 aa14.91□□□□□ -0.02
KDM3B-203ENST00000505756 CAMTA2O94983 1202 aa14.9□□□□□ -0.02
KDM3B-203ENST00000505756 CALD1Q05682 793 aaKnown RBP14.9□□□□□ -0.02
KDM3B-203ENST00000505756 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
KDM3B-203ENST00000505756 BCORQ6W2J9 1755 aa14.89□□□□□ -0.03
KDM3B-203ENST00000505756 CFAP44Q96MT7 982 aa14.89□□□□□ -0.03
KDM3B-203ENST00000505756 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
KDM3B-203ENST00000505756 UTRNP46939 3433 aa14.89□□□□□ -0.03
KDM3B-203ENST00000505756 ERBB4Q15303 1308 aa14.89□□□□□ -0.03
KDM3B-203ENST00000505756 GOLGB1Q14789 3259 aaKnown RBP14.88□□□□□ -0.03
KDM3B-203ENST00000505756 RGL2O15211 777 aa14.88□□□□□ -0.03
KDM3B-203ENST00000505756 GRIN3BO60391 1043 aa14.88□□□□□ -0.03
KDM3B-203ENST00000505756 TBC1D9BQ66K14 1250 aa14.88□□□□□ -0.03
KDM3B-203ENST00000505756 CLEC4GQ6UXB4 293 aa14.88□□□□□ -0.03
KDM3B-203ENST00000505756 KIAA1551Q9HCM1 1747 aa14.88□□□□□ -0.03
KDM3B-203ENST00000505756 NRXN2Q9P2S2 1712 aa14.87□□□□□ -0.03
KDM3B-203ENST00000505756 SERPINB2P05120 415 aa14.87□□□□□ -0.03
KDM3B-203ENST00000505756 YBX3P16989 372 aaKnown RBP eCLIP14.87□□□□□ -0.03
KDM3B-203ENST00000505756 BICDL1Q6ZP65 573 aa14.87□□□□□ -0.03
KDM3B-203ENST00000505756 ZNF652Q9Y2D9 606 aa14.87□□□□□ -0.03
KDM3B-203ENST00000505756 CARMIL3Q8ND23 1372 aa14.86□□□□□ -0.03
KDM3B-203ENST00000505756 ZNF853P0CG23 659 aa14.86□□□□□ -0.03
KDM3B-203ENST00000505756 CCDC27Q2M243 656 aa14.86□□□□□ -0.03
KDM3B-203ENST00000505756 NCBP3Q53F19 620 aaKnown RBP14.86□□□□□ -0.03
KDM3B-203ENST00000505756 IFT57Q9NWB7 429 aa14.86□□□□□ -0.03
KDM3B-203ENST00000505756 A0A0G2JLW4 131 aa14.85□□□□□ -0.03
KDM3B-203ENST00000505756 MYL6BP14649 208 aa14.85□□□□□ -0.03
KDM3B-203ENST00000505756 DPEP1P16444 411 aa14.85□□□□□ -0.03
KDM3B-203ENST00000505756 EIF2S2P20042 333 aaKnown RBP14.85□□□□□ -0.03
KDM3B-203ENST00000505756 YY1P25490 414 aa14.85□□□□□ -0.03
KDM3B-203ENST00000505756 GNAI1P63096 354 aa14.85□□□□□ -0.03
KDM3B-203ENST00000505756 SETDB2Q96T68 719 aa14.85□□□□□ -0.03
KDM3B-203ENST00000505756 MBIPQ9NS73 344 aa14.85□□□□□ -0.03
KDM3B-203ENST00000505756 AFDNP55196 1824 aaKnown RBP14.85□□□□□ -0.03
KDM3B-203ENST00000505756 N4BP2Q86UW6 1770 aaPredicted RBP14.84□□□□□ -0.03
KDM3B-203ENST00000505756 HOXB7P09629 217 aa14.84□□□□□ -0.03
KDM3B-203ENST00000505756 NGEFQ8N5V2 710 aa14.84□□□□□ -0.03
KDM3B-203ENST00000505756 ERVV-1B6SEH8 477 aa14.83□□□□□ -0.04
KDM3B-203ENST00000505756 PDIA6Q15084 440 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms