RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
PDLIM7-214ENST00000505746 ARHGAP27Q6ZUM4 889 aa16.14■□□□□ 0.17
PDLIM7-214ENST00000505746 ZNF526Q8TF50 670 aaPredicted RBP16.14■□□□□ 0.17
PDLIM7-214ENST00000505746 RSPH6AQ9H0K4 717 aa16.14■□□□□ 0.17
PDLIM7-214ENST00000505746 COL15A1P39059 1388 aa16.13■□□□□ 0.17
PDLIM7-214ENST00000505746 U2AF1L5P0DN76 240 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-214ENST00000505746 KCNA3P22001 575 aa16.13■□□□□ 0.17
PDLIM7-214ENST00000505746 CANXP27824 592 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-214ENST00000505746 U2AF1Q01081 240 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDLIM7-214ENST00000505746 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
PDLIM7-214ENST00000505746 ADAMTS7Q9UKP4 1686 aa16.13■□□□□ 0.17
PDLIM7-214ENST00000505746 MYH14Q7Z406 1995 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-214ENST00000505746 A0A087WZG4 1122 aa16.12■□□□□ 0.17
PDLIM7-214ENST00000505746 DALRD3Q5D0E6 543 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-214ENST00000505746 ZNF496Q96IT1 587 aaPredicted RBP16.12■□□□□ 0.17
PDLIM7-214ENST00000505746 FMNL2Q96PY5 1086 aa16.12■□□□□ 0.17
PDLIM7-214ENST00000505746 KIF13BQ9NQT8 1826 aa16.11■□□□□ 0.17
PDLIM7-214ENST00000505746 BTBD11A6QL63 1104 aa16.11■□□□□ 0.17
PDLIM7-214ENST00000505746 NFIXQ14938 502 aa16.11■□□□□ 0.17
PDLIM7-214ENST00000505746 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
PDLIM7-214ENST00000505746 EIF5P55010 431 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-214ENST00000505746 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-214ENST00000505746 CEMIPQ8WUJ3 1361 aa16.1■□□□□ 0.17
PDLIM7-214ENST00000505746 SERPINB2P05120 415 aa16.09■□□□□ 0.17
PDLIM7-214ENST00000505746 CHRNA5P30532 468 aa16.09■□□□□ 0.17
PDLIM7-214ENST00000505746 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-214ENST00000505746 BCL2L12Q9HB09 334 aa16.09■□□□□ 0.17
PDLIM7-214ENST00000505746 IL6STP40189 918 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-214ENST00000505746 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-214ENST00000505746 KIAA1551Q9HCM1 1747 aa16.07■□□□□ 0.16
PDLIM7-214ENST00000505746 N4BP2Q86UW6 1770 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-214ENST00000505746 NEFMP07197 916 aa16.06■□□□□ 0.16
PDLIM7-214ENST00000505746 ZNF330Q9Y3S2 320 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-214ENST00000505746 KCNQ3O43525 872 aa16.05■□□□□ 0.16
PDLIM7-214ENST00000505746 A1BGP04217 495 aa16.05■□□□□ 0.16
PDLIM7-214ENST00000505746 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
PDLIM7-214ENST00000505746 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
PDLIM7-214ENST00000505746 MCM10Q7L590 875 aa16.05■□□□□ 0.16
PDLIM7-214ENST00000505746 TBC1D2BQ9UPU7 963 aa16.05■□□□□ 0.16
PDLIM7-214ENST00000505746 KIF3CO14782 793 aa16.04■□□□□ 0.16
PDLIM7-214ENST00000505746 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-214ENST00000505746 UBR2Q8IWV8 1755 aa16.04■□□□□ 0.16
PDLIM7-214ENST00000505746 H0YIN7 160 aa16.03■□□□□ 0.16
PDLIM7-214ENST00000505746 TBC1D9BQ66K14 1250 aa16.03■□□□□ 0.16
PDLIM7-214ENST00000505746 C2CD5Q86YS7 1000 aa16.03■□□□□ 0.16
PDLIM7-214ENST00000505746 PDZRN3Q9UPQ7 1066 aa16.03■□□□□ 0.16
PDLIM7-214ENST00000505746 HSPA6P17066 643 aa16.02■□□□□ 0.16
PDLIM7-214ENST00000505746 TTLL6Q8N841 843 aa16.02■□□□□ 0.16
PDLIM7-214ENST00000505746 USP16Q9Y5T5 823 aa16.02■□□□□ 0.16
PDLIM7-214ENST00000505746 DCTN1Q14203 1278 aa16.01■□□□□ 0.15
PDLIM7-214ENST00000505746 TAF7Q15545 349 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-214ENST00000505746 DZIP3Q86Y13 1208 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-214ENST00000505746 SETDB2Q96T68 719 aa16.01■□□□□ 0.15
PDLIM7-214ENST00000505746 BRIP1Q9BX63 1249 aa16.01■□□□□ 0.15
PDLIM7-214ENST00000505746 PNNQ9H307 717 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-214ENST00000505746 RNF181Q9P0P0 153 aa16.01■□□□□ 0.15
PDLIM7-214ENST00000505746 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
PDLIM7-214ENST00000505746 TOMM70O94826 608 aa16■□□□□ 0.15
PDLIM7-214ENST00000505746 CAMTA2O94983 1202 aa16■□□□□ 0.15
PDLIM7-214ENST00000505746 PDE6BP35913 854 aa16■□□□□ 0.15
PDLIM7-214ENST00000505746 KDM2BQ8NHM5 1336 aa15.99■□□□□ 0.15
PDLIM7-214ENST00000505746 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-214ENST00000505746 NPHP1O15259 732 aa15.99■□□□□ 0.15
PDLIM7-214ENST00000505746 PNISRQ8TF01 805 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-214ENST00000505746 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-214ENST00000505746 PRAMEF22A3QJZ6 481 aa15.98■□□□□ 0.15
PDLIM7-214ENST00000505746 PRR5LQ6MZQ0 368 aa15.98■□□□□ 0.15
PDLIM7-214ENST00000505746 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
PDLIM7-214ENST00000505746 NMRK2Q9NPI5 230 aa15.98■□□□□ 0.15
PDLIM7-214ENST00000505746 ZNF652Q9Y2D9 606 aa15.98■□□□□ 0.15
PDLIM7-214ENST00000505746 BRCA1P38398 1863 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-214ENST00000505746 NRXN2Q9P2S2 1712 aa15.97■□□□□ 0.15
PDLIM7-214ENST00000505746 LMNB1P20700 586 aa15.97■□□□□ 0.15
PDLIM7-214ENST00000505746 PIP4K2AP48426 406 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-214ENST00000505746 ST5P78524 1137 aa15.97■□□□□ 0.15
PDLIM7-214ENST00000505746 C16orf71Q8IYS4 520 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-214ENST00000505746 CNBD1Q8NA66 436 aa15.97■□□□□ 0.15
PDLIM7-214ENST00000505746 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDLIM7-214ENST00000505746 ZC3H4Q9UPT8 1303 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-214ENST00000505746 NFE2L2Q16236 605 aa15.96■□□□□ 0.15
PDLIM7-214ENST00000505746 PLEKHF1Q96S99 279 aa15.96■□□□□ 0.15
PDLIM7-214ENST00000505746 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.14
PDLIM7-214ENST00000505746 MAPK8IP3Q9UPT6 1336 aa15.95■□□□□ 0.14
PDLIM7-214ENST00000505746 RGL2O15211 777 aa15.95■□□□□ 0.14
PDLIM7-214ENST00000505746 RASSF7Q02833 373 aa15.95■□□□□ 0.14
PDLIM7-214ENST00000505746 CCDC24Q8N4L8 307 aa15.95■□□□□ 0.14
PDLIM7-214ENST00000505746 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
PDLIM7-214ENST00000505746 RALBP1Q15311 655 aa15.94■□□□□ 0.14
PDLIM7-214ENST00000505746 NBPF5PQ86XG9 351 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-214ENST00000505746 CNKSR1Q969H4 720 aa15.94■□□□□ 0.14
PDLIM7-214ENST00000505746 NBPF26B4DH59 902 aa15.93■□□□□ 0.14
PDLIM7-214ENST00000505746 APLP1P51693 650 aa15.93■□□□□ 0.14
PDLIM7-214ENST00000505746 STYK1Q6J9G0 422 aa15.93■□□□□ 0.14
PDLIM7-214ENST00000505746 NBPF10Q6P3W6 841 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-214ENST00000505746 NBPF15Q8N660 670 aa15.93■□□□□ 0.14
PDLIM7-214ENST00000505746 RBM46Q8TBY0 533 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-214ENST00000505746 AFDNP55196 1824 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-214ENST00000505746 SCN7AQ01118 1682 aa15.92■□□□□ 0.14
PDLIM7-214ENST00000505746 C21orf2O43822 256 aa15.92■□□□□ 0.14
PDLIM7-214ENST00000505746 TPTE2Q6XPS3 522 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms