RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 LRRFIP2Q9Y608 721 aaKnown RBP21.36■■□□□ 1.01
TRAPPC11-204ENST00000505676 HSP90AB4PQ58FF6 505 aa21.36■■□□□ 1.01
TRAPPC11-204ENST00000505676 CARD10Q9BWT7 1032 aa21.36■■□□□ 1.01
TRAPPC11-204ENST00000505676 AOX1Q06278 1338 aa21.36■■□□□ 1.01
TRAPPC11-204ENST00000505676 TBC1D9Q6ZT07 1266 aa21.35■■□□□ 1.01
TRAPPC11-204ENST00000505676 TTC5Q8N0Z6 440 aa21.35■■□□□ 1.01
TRAPPC11-204ENST00000505676 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
TRAPPC11-204ENST00000505676 POLA2Q14181 598 aa21.34■■□□□ 1.01
TRAPPC11-204ENST00000505676 CYP27B1O15528 508 aa21.33■■□□□ 1.01
TRAPPC11-204ENST00000505676 ERBB4Q15303 1308 aa21.33■■□□□ 1
TRAPPC11-204ENST00000505676 SNRPA1P09661 255 aaKnown RBP21.33■■□□□ 1
TRAPPC11-204ENST00000505676 MTX1Q13505 466 aa21.33■■□□□ 1
TRAPPC11-204ENST00000505676 FMNL2Q96PY5 1086 aa21.33■■□□□ 1
TRAPPC11-204ENST00000505676 TOM1L2Q6ZVM7 507 aa21.32■■□□□ 1
TRAPPC11-204ENST00000505676 LINS1Q8NG48 757 aa21.32■■□□□ 1
TRAPPC11-204ENST00000505676 ERVV-2B6SEH9 535 aa21.32■■□□□ 1
TRAPPC11-204ENST00000505676 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
TRAPPC11-204ENST00000505676 CABP4P57796 275 aa21.31■■□□□ 1
TRAPPC11-204ENST00000505676 NKX1-1Q15270 411 aaPredicted RBP21.31■■□□□ 1
TRAPPC11-204ENST00000505676 ZCRB1Q8TBF4 217 aaKnown RBP21.31■■□□□ 1
TRAPPC11-204ENST00000505676 SNX21Q969T3 373 aa21.31■■□□□ 1
TRAPPC11-204ENST00000505676 PNMA6EA0A0J9YXQ4 647 aa21.31■■□□□ 1
TRAPPC11-204ENST00000505676 MAP3K2Q9Y2U5 619 aa21.31■■□□□ 1
TRAPPC11-204ENST00000505676 UTYO14607 1347 aa21.3■■□□□ 1
TRAPPC11-204ENST00000505676 IL2RBP14784 551 aa21.3■■□□□ 1
TRAPPC11-204ENST00000505676 PDE1AP54750 535 aa21.3■■□□□ 1
TRAPPC11-204ENST00000505676 STAP2Q9UGK3 403 aa21.3■■□□□ 1
TRAPPC11-204ENST00000505676 SALL3Q9BXA9 1300 aa21.3■■□□□ 1
TRAPPC11-204ENST00000505676 LARP1Q6PKG0 1096 aaKnown RBP21.29■■□□□ 1
TRAPPC11-204ENST00000505676 LAMB4A4D0S4 1761 aa21.29■■□□□ 1
TRAPPC11-204ENST00000505676 TBC1D2Q9BYX2 928 aa21.29■■□□□ 1
TRAPPC11-204ENST00000505676 SLC4A3P48751 1232 aa21.28■■□□□ 1
TRAPPC11-204ENST00000505676 EXOC6BQ9Y2D4 811 aa21.28■■□□□ 1
TRAPPC11-204ENST00000505676 C5P01031 1676 aa21.28■■□□□ 1
TRAPPC11-204ENST00000505676 PDIA6Q15084 440 aa21.28■■□□□ 1
TRAPPC11-204ENST00000505676 PPP1R42Q7Z4L9 355 aa21.28■■□□□ 1
TRAPPC11-204ENST00000505676 HSCBQ8IWL3 235 aa21.28■■□□□ 1
TRAPPC11-204ENST00000505676 C16orf71Q8IYS4 520 aaPredicted RBP21.28■■□□□ 1
TRAPPC11-204ENST00000505676 SMARCA5O60264 1052 aaPredicted RBP21.27■■□□□ 1
TRAPPC11-204ENST00000505676 NEXNQ0ZGT2 675 aa21.27■■□□□ 1
TRAPPC11-204ENST00000505676 NBR1Q14596 966 aa21.27■■□□□ 1
TRAPPC11-204ENST00000505676 KIF1BPQ96EK5 621 aa21.27■■□□□ 1
TRAPPC11-204ENST00000505676 C9orf78Q9NZ63 289 aaPredicted RBP21.27■■□□□ 1
TRAPPC11-204ENST00000505676 SDSP20132 328 aa21.27■□□□□ 0.99
TRAPPC11-204ENST00000505676 MX1P20591 662 aa21.27■□□□□ 0.99
TRAPPC11-204ENST00000505676 AHDC1Q5TGY3 1603 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC11-204ENST00000505676 REC8O95072 547 aa21.26■□□□□ 0.99
TRAPPC11-204ENST00000505676 ZNF496Q96IT1 587 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC11-204ENST00000505676 ERC1Q8IUD2 1116 aa21.25■□□□□ 0.99
TRAPPC11-204ENST00000505676 SRGAP3O43295 1099 aa21.25■□□□□ 0.99
TRAPPC11-204ENST00000505676 NBPF7P0C2Y1 421 aaPredicted RBP21.25■□□□□ 0.99
TRAPPC11-204ENST00000505676 SLC39A6Q13433 755 aa21.25■□□□□ 0.99
TRAPPC11-204ENST00000505676 PROSER3Q2NL68 480 aa21.25■□□□□ 0.99
TRAPPC11-204ENST00000505676 APBB1O00213 710 aa21.24■□□□□ 0.99
TRAPPC11-204ENST00000505676 EVA1CP58658 441 aa21.24■□□□□ 0.99
TRAPPC11-204ENST00000505676 IL27Q8NEV9 243 aa21.24■□□□□ 0.99
TRAPPC11-204ENST00000505676 GRM8O00222 908 aa21.24■□□□□ 0.99
TRAPPC11-204ENST00000505676 ANXA1P04083 346 aa21.24■□□□□ 0.99
TRAPPC11-204ENST00000505676 RIC3Q7Z5B4 369 aa21.24■□□□□ 0.99
TRAPPC11-204ENST00000505676 OTUD7AQ8TE49 926 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC11-204ENST00000505676 PAPPAQ13219 1627 aa21.24■□□□□ 0.99
TRAPPC11-204ENST00000505676 COL22A1Q8NFW1 1626 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC11-204ENST00000505676 COL15A1P39059 1388 aa21.23■□□□□ 0.99
TRAPPC11-204ENST00000505676 COL14A1Q05707 1796 aaKnown RBP21.23■□□□□ 0.99
TRAPPC11-204ENST00000505676 EPB41L2O43491 1005 aaKnown RBP21.23■□□□□ 0.99
TRAPPC11-204ENST00000505676 SURF6O75683 361 aaKnown RBP21.23■□□□□ 0.99
TRAPPC11-204ENST00000505676 UBR2Q8IWV8 1755 aa21.22■□□□□ 0.99
TRAPPC11-204ENST00000505676 METTL22Q9BUU2 404 aaPredicted RBP21.22■□□□□ 0.99
TRAPPC11-204ENST00000505676 PRAMEF22A3QJZ6 481 aa21.21■□□□□ 0.99
TRAPPC11-204ENST00000505676 RHPN1Q8TCX5 695 aa21.21■□□□□ 0.99
TRAPPC11-204ENST00000505676 GLI3P10071 1580 aa21.21■□□□□ 0.99
TRAPPC11-204ENST00000505676 ERC2O15083 957 aa21.2■□□□□ 0.98
TRAPPC11-204ENST00000505676 USP42Q9H9J4 1324 aaKnown RBP21.2■□□□□ 0.98
TRAPPC11-204ENST00000505676 TUBGCP6Q96RT7 1819 aa21.2■□□□□ 0.98
TRAPPC11-204ENST00000505676 RABEP1Q15276 862 aa21.2■□□□□ 0.98
TRAPPC11-204ENST00000505676 TNS2Q63HR2 1409 aa21.2■□□□□ 0.98
TRAPPC11-204ENST00000505676 ANKRD13DQ6ZTN6 518 aa21.19■□□□□ 0.98
TRAPPC11-204ENST00000505676 LRP10Q7Z4F1 713 aa21.19■□□□□ 0.98
TRAPPC11-204ENST00000505676 XAGE3Q8WTP9 111 aa21.19■□□□□ 0.98
TRAPPC11-204ENST00000505676 ANTXR1Q9H6X2 564 aa21.19■□□□□ 0.98
TRAPPC11-204ENST00000505676 SHANK3Q9BYB0 1731 aa21.19■□□□□ 0.98
TRAPPC11-204ENST00000505676 TTC41PQ6P2S7 1318 aa21.19■□□□□ 0.98
TRAPPC11-204ENST00000505676 NFKBIBQ15653 356 aa21.19■□□□□ 0.98
TRAPPC11-204ENST00000505676 COPS6Q7L5N1 327 aa21.18■□□□□ 0.98
TRAPPC11-204ENST00000505676 USP26Q9BXU7 913 aa21.18■□□□□ 0.98
TRAPPC11-204ENST00000505676 NEURL1BA8MQ27 555 aa21.17■□□□□ 0.98
TRAPPC11-204ENST00000505676 PLCH1Q4KWH8 1693 aa21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 AIMP1Q12904 312 aaKnown RBP21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 PLBD2Q8NHP8 589 aa21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 GPATCH3Q96I76 525 aa21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 KIF2CQ99661 725 aa21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 USP16Q9Y5T5 823 aa21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 KCPQ6ZWJ8 1503 aa21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 ROBO1Q9Y6N7 1651 aa21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 CWF19L2Q2TBE0 894 aaKnown RBP21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 STRN4Q9NRL3 753 aa21.16■□□□□ 0.98
TRAPPC11-204ENST00000505676 MYL6BP14649 208 aa21.15■□□□□ 0.98
TRAPPC11-204ENST00000505676 GCKRQ14397 625 aa21.15■□□□□ 0.98
TRAPPC11-204ENST00000505676 CLASRPQ8N2M8 674 aaKnown RBP21.15■□□□□ 0.98
TRAPPC11-204ENST00000505676 TEX13AQ9BXU3 409 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms