RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 STAP2Q9UGK3 403 aa23.94■■□□□ 1.42
SDHA-206ENST00000505555 RGPD5Q99666 1765 aa23.94■■□□□ 1.42
SDHA-206ENST00000505555 MAP3K2Q9Y2U5 619 aa23.93■■□□□ 1.42
SDHA-206ENST00000505555 ESYT1Q9BSJ8 1104 aa23.91■■□□□ 1.42
SDHA-206ENST00000505555 MST1RQ04912 1400 aa23.91■■□□□ 1.42
SDHA-206ENST00000505555 SLC39A6Q13433 755 aa23.91■■□□□ 1.42
SDHA-206ENST00000505555 RHPN1Q8TCX5 695 aa23.91■■□□□ 1.42
SDHA-206ENST00000505555 RAPGEF4Q8WZA2 1011 aa23.91■■□□□ 1.42
SDHA-206ENST00000505555 HEG1Q9ULI3 1381 aa23.91■■□□□ 1.42
SDHA-206ENST00000505555 KIF1AQ12756 1690 aa23.9■■□□□ 1.42
SDHA-206ENST00000505555 CHMLP26374 656 aa23.9■■□□□ 1.42
SDHA-206ENST00000505555 RAB11FIP3O75154 756 aa23.9■■□□□ 1.42
SDHA-206ENST00000505555 MAP4K4O95819 1239 aaPredicted RBP23.89■■□□□ 1.41
SDHA-206ENST00000505555 CWF19L2Q2TBE0 894 aaKnown RBP23.89■■□□□ 1.41
SDHA-206ENST00000505555 OVOS2A0A0G2JMS6 1433 aa23.89■■□□□ 1.41
SDHA-206ENST00000505555 DDX11L8A8MPP1 907 aa23.88■■□□□ 1.41
SDHA-206ENST00000505555 SSFA2P28290 1259 aa23.88■■□□□ 1.41
SDHA-206ENST00000505555 CHRNA2Q15822 529 aa23.88■■□□□ 1.41
SDHA-206ENST00000505555 ARXQ96QS3 562 aa23.88■■□□□ 1.41
SDHA-206ENST00000505555 AIMP1Q12904 312 aaKnown RBP23.88■■□□□ 1.41
SDHA-206ENST00000505555 KSR2Q6VAB6 950 aa23.88■■□□□ 1.41
SDHA-206ENST00000505555 CAMTA1Q9Y6Y1 1673 aa23.88■■□□□ 1.41
SDHA-206ENST00000505555 ALS2Q96Q42 1657 aa23.87■■□□□ 1.41
SDHA-206ENST00000505555 C9orf78Q9NZ63 289 aaPredicted RBP23.87■■□□□ 1.41
SDHA-206ENST00000505555 CSB-PGBD3P0DP91 1061 aa23.87■■□□□ 1.41
SDHA-206ENST00000505555 ST18O60284 1047 aa23.86■■□□□ 1.41
SDHA-206ENST00000505555 NFATC2IPQ8NCF5 419 aa23.86■■□□□ 1.41
SDHA-206ENST00000505555 RTN4Q9NQC3 1192 aaKnown RBP23.86■■□□□ 1.41
SDHA-206ENST00000505555 KIF1BPQ96EK5 621 aa23.86■■□□□ 1.41
SDHA-206ENST00000505555 GBP4Q96PP9 640 aa23.86■■□□□ 1.41
SDHA-206ENST00000505555 ANO2Q9NQ90 1003 aa23.86■■□□□ 1.41
SDHA-206ENST00000505555 TATP17735 454 aaPredicted RBP23.85■■□□□ 1.41
SDHA-206ENST00000505555 TUBGCP6Q96RT7 1819 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 ZNF790Q6PG37 636 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 IL25Q9H293 177 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 HYPKQ9NX55 129 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 PALD1Q9ULE6 856 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 NPHP3Q7Z494 1330 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 PHKG2P15735 406 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 PDIA6Q15084 440 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 PI4K2BQ8TCG2 481 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 SLC52A2Q9HAB3 445 aa23.84■■□□□ 1.41
SDHA-206ENST00000505555 STRCP1A6NGW2 1772 aa23.83■■□□□ 1.41
SDHA-206ENST00000505555 HSPA2P54652 639 aa23.83■■□□□ 1.41
SDHA-206ENST00000505555 AOX1Q06278 1338 aa23.83■■□□□ 1.41
SDHA-206ENST00000505555 ALDH1L1O75891 902 aa23.83■■□□□ 1.4
SDHA-206ENST00000505555 OS9Q13438 667 aaPredicted RBP23.83■■□□□ 1.4
SDHA-206ENST00000505555 DDX21Q9NR30 783 aaKnown RBP eCLIP23.83■■□□□ 1.4
SDHA-206ENST00000505555 KDM6AO15550 1401 aaPredicted RBP23.83■■□□□ 1.4
SDHA-206ENST00000505555 NEK4P51957 841 aa23.82■■□□□ 1.4
SDHA-206ENST00000505555 SPG7Q9UQ90 795 aa23.82■■□□□ 1.4
SDHA-206ENST00000505555 MEGF6O75095 1541 aa23.82■■□□□ 1.4
SDHA-206ENST00000505555 MYL6BP14649 208 aa23.82■■□□□ 1.4
SDHA-206ENST00000505555 ZGPATQ8N5A5 531 aaKnown RBP23.82■■□□□ 1.4
SDHA-206ENST00000505555 PA2G4Q9UQ80 394 aaKnown RBP23.82■■□□□ 1.4
SDHA-206ENST00000505555 SIPA1L3O60292 1781 aaPredicted RBP23.81■■□□□ 1.4
SDHA-206ENST00000505555 PKP1Q13835 747 aa23.8■■□□□ 1.4
SDHA-206ENST00000505555 CADPS2Q86UW7 1296 aa23.8■■□□□ 1.4
SDHA-206ENST00000505555 MTX1Q13505 466 aa23.79■■□□□ 1.4
SDHA-206ENST00000505555 HSP90AB4PQ58FF6 505 aa23.79■■□□□ 1.4
SDHA-206ENST00000505555 IFNL2Q8IZJ0 200 aa23.79■■□□□ 1.4
SDHA-206ENST00000505555 LINS1Q8NG48 757 aa23.79■■□□□ 1.4
SDHA-206ENST00000505555 GOLGA6L3A6NEY3 463 aa23.78■■□□□ 1.4
SDHA-206ENST00000505555 DDX58O95786 925 aaKnown RBP23.78■■□□□ 1.4
SDHA-206ENST00000505555 SUCLG2Q96I99 432 aa23.78■■□□□ 1.4
SDHA-206ENST00000505555 ZNF496Q96IT1 587 aaPredicted RBP23.78■■□□□ 1.4
SDHA-206ENST00000505555 ADAMTS7Q9UKP4 1686 aa23.78■■□□□ 1.4
SDHA-206ENST00000505555 GRM8O00222 908 aa23.78■■□□□ 1.4
SDHA-206ENST00000505555 CYP27B1O15528 508 aa23.78■■□□□ 1.4
SDHA-206ENST00000505555 MCCP23508 829 aa23.78■■□□□ 1.4
SDHA-206ENST00000505555 PIP4K2AP48426 406 aaPredicted RBP23.78■■□□□ 1.4
SDHA-206ENST00000505555 RIC3Q7Z5B4 369 aa23.78■■□□□ 1.4
SDHA-206ENST00000505555 KAZALD1Q96I82 304 aa23.78■■□□□ 1.4
SDHA-206ENST00000505555 L1TD1Q5T7N2 865 aaKnown RBP23.77■■□□□ 1.4
SDHA-206ENST00000505555 FSD2A1L4K1 749 aa23.76■■□□□ 1.39
SDHA-206ENST00000505555 BAG4O95429 457 aaKnown RBP23.76■■□□□ 1.39
SDHA-206ENST00000505555 AK9Q5TCS8 1911 aa23.76■■□□□ 1.39
SDHA-206ENST00000505555 DCCP43146 1447 aa23.76■■□□□ 1.39
SDHA-206ENST00000505555 TNS3Q68CZ2 1445 aa23.76■■□□□ 1.39
SDHA-206ENST00000505555 IGKV5-2P06315 115 aa23.76■■□□□ 1.39
SDHA-206ENST00000505555 SPATA31A3Q5VYP0 1347 aa23.75■■□□□ 1.39
SDHA-206ENST00000505555 XAGE3Q8WTP9 111 aa23.75■■□□□ 1.39
SDHA-206ENST00000505555 BICC1Q9H694 974 aaKnown RBP23.75■■□□□ 1.39
SDHA-206ENST00000505555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.75■■□□□ 1.39
SDHA-206ENST00000505555 USP16Q9Y5T5 823 aa23.75■■□□□ 1.39
SDHA-206ENST00000505555 COL18A1P39060 1754 aa23.75■■□□□ 1.39
SDHA-206ENST00000505555 NOL8Q76FK4 1167 aaKnown RBP23.75■■□□□ 1.39
SDHA-206ENST00000505555 COPS6Q7L5N1 327 aa23.75■■□□□ 1.39
SDHA-206ENST00000505555 LMTK3Q96Q04 1460 aa23.74■■□□□ 1.39
SDHA-206ENST00000505555 XRCC6P12956 609 aaKnown RBP eCLIP23.74■■□□□ 1.39
SDHA-206ENST00000505555 CLASRPQ8N2M8 674 aaKnown RBP23.74■■□□□ 1.39
SDHA-206ENST00000505555 TMX3Q96JJ7 454 aa23.74■■□□□ 1.39
SDHA-206ENST00000505555 NUCB2P80303 420 aa23.74■■□□□ 1.39
SDHA-206ENST00000505555 CNTROBQ8N137 903 aa23.74■■□□□ 1.39
SDHA-206ENST00000505555 CWC22Q9HCG8 908 aaKnown RBP23.74■■□□□ 1.39
SDHA-206ENST00000505555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.74■■□□□ 1.39
SDHA-206ENST00000505555 CYP2E1P05181 493 aaPredicted RBP23.73■■□□□ 1.39
SDHA-206ENST00000505555 CLEC17AQ6ZS10 378 aa23.73■■□□□ 1.39
SDHA-206ENST00000505555 DCAF5Q96JK2 942 aa23.73■■□□□ 1.39
SDHA-206ENST00000505555 UPF3BQ9BZI7 483 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms