RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 ATP10DQ9P241 1426 aa16.43■□□□□ 0.22
CCSER1-205ENST00000505073 CEP85Q6P2H3 762 aa16.42■□□□□ 0.22
CCSER1-205ENST00000505073 TTC5Q8N0Z6 440 aa16.42■□□□□ 0.22
CCSER1-205ENST00000505073 LNPKQ9C0E8 428 aa16.42■□□□□ 0.22
CCSER1-205ENST00000505073 RRAGDQ9NQL2 400 aaPredicted RBP16.42■□□□□ 0.22
CCSER1-205ENST00000505073 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
CCSER1-205ENST00000505073 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
CCSER1-205ENST00000505073 UBAP1LF5GYI3 381 aa16.42■□□□□ 0.22
CCSER1-205ENST00000505073 NUCB1Q02818 461 aa16.42■□□□□ 0.22
CCSER1-205ENST00000505073 NUTM2AQ8IVF1 878 aaPredicted RBP16.42■□□□□ 0.22
CCSER1-205ENST00000505073 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
CCSER1-205ENST00000505073 PI4KAP2A4QPH2 592 aa16.42■□□□□ 0.22
CCSER1-205ENST00000505073 PI4KAP1Q8N8J0 262 aa16.42■□□□□ 0.22
CCSER1-205ENST00000505073 SHANK3Q9BYB0 1731 aa16.41■□□□□ 0.22
CCSER1-205ENST00000505073 ANKRD45Q5TZF3 282 aa16.41■□□□□ 0.22
CCSER1-205ENST00000505073 C5P01031 1676 aa16.41■□□□□ 0.22
CCSER1-205ENST00000505073 GCC1Q96CN9 775 aa16.41■□□□□ 0.22
CCSER1-205ENST00000505073 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
CCSER1-205ENST00000505073 NKX1-1Q15270 411 aaPredicted RBP16.4■□□□□ 0.22
CCSER1-205ENST00000505073 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
CCSER1-205ENST00000505073 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
CCSER1-205ENST00000505073 DNAAF4Q8WXU2 420 aa16.4■□□□□ 0.22
CCSER1-205ENST00000505073 TBC1D32Q96NH3 1257 aa16.4■□□□□ 0.22
CCSER1-205ENST00000505073 PDIA6Q15084 440 aa16.39■□□□□ 0.21
CCSER1-205ENST00000505073 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
CCSER1-205ENST00000505073 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
CCSER1-205ENST00000505073 PXDNLA1KZ92 1463 aa16.39■□□□□ 0.21
CCSER1-205ENST00000505073 ADCY9O60503 1353 aa16.39■□□□□ 0.21
CCSER1-205ENST00000505073 ERVV-2B6SEH9 535 aa16.38■□□□□ 0.21
CCSER1-205ENST00000505073 GNAI2P04899 355 aa16.38■□□□□ 0.21
CCSER1-205ENST00000505073 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
CCSER1-205ENST00000505073 DDX21Q9NR30 783 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCSER1-205ENST00000505073 MYL6BP14649 208 aa16.38■□□□□ 0.21
CCSER1-205ENST00000505073 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
CCSER1-205ENST00000505073 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
CCSER1-205ENST00000505073 SRCIN1Q9C0H9 1055 aa16.38■□□□□ 0.21
CCSER1-205ENST00000505073 USP44Q9H0E7 712 aa16.38■□□□□ 0.21
CCSER1-205ENST00000505073 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
CCSER1-205ENST00000505073 GNAI3P08754 354 aa16.37■□□□□ 0.21
CCSER1-205ENST00000505073 DCTPP1Q9H773 170 aa16.37■□□□□ 0.21
CCSER1-205ENST00000505073 BEND3Q5T5X7 828 aa16.37■□□□□ 0.21
CCSER1-205ENST00000505073 TBC1D2Q9BYX2 928 aa16.37■□□□□ 0.21
CCSER1-205ENST00000505073 MAP3K2Q9Y2U5 619 aa16.37■□□□□ 0.21
CCSER1-205ENST00000505073 N4BP2Q86UW6 1770 aaPredicted RBP16.37■□□□□ 0.21
CCSER1-205ENST00000505073 DISP2A7MBM2 1401 aa16.36■□□□□ 0.21
CCSER1-205ENST00000505073 LRRFIP2Q9Y608 721 aaKnown RBP16.36■□□□□ 0.21
CCSER1-205ENST00000505073 PLCH1Q4KWH8 1693 aa16.36■□□□□ 0.21
CCSER1-205ENST00000505073 FSD2A1L4K1 749 aa16.35■□□□□ 0.21
CCSER1-205ENST00000505073 KSR2Q6VAB6 950 aa16.35■□□□□ 0.21
CCSER1-205ENST00000505073 GOLGA6L3A6NEY3 463 aa16.34■□□□□ 0.21
CCSER1-205ENST00000505073 APBB1O00213 710 aa16.34■□□□□ 0.21
CCSER1-205ENST00000505073 UBTFL1P0CB47 393 aaPredicted RBP16.34■□□□□ 0.21
CCSER1-205ENST00000505073 TOGARAM1Q9Y4F4 1720 aa16.34■□□□□ 0.21
CCSER1-205ENST00000505073 PTCD1O75127 700 aaKnown RBP16.34■□□□□ 0.21
CCSER1-205ENST00000505073 GLI3P10071 1580 aa16.34■□□□□ 0.21
CCSER1-205ENST00000505073 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.21
CCSER1-205ENST00000505073 KAT6BQ8WYB5 2073 aa16.33■□□□□ 0.21
CCSER1-205ENST00000505073 HMMRO75330 724 aa16.33■□□□□ 0.2
CCSER1-205ENST00000505073 XRCC6P12956 609 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCSER1-205ENST00000505073 TMOD3Q9NYL9 352 aa16.33■□□□□ 0.2
CCSER1-205ENST00000505073 PNMA6EA0A0J9YXQ4 647 aa16.32■□□□□ 0.2
CCSER1-205ENST00000505073 NBPF7P0C2Y1 421 aaPredicted RBP16.32■□□□□ 0.2
CCSER1-205ENST00000505073 EXOC5O00471 708 aa16.32■□□□□ 0.2
CCSER1-205ENST00000505073 MCM4P33991 863 aa16.32■□□□□ 0.2
CCSER1-205ENST00000505073 COPS6Q7L5N1 327 aa16.32■□□□□ 0.2
CCSER1-205ENST00000505073 SMARCA5O60264 1052 aaPredicted RBP16.32■□□□□ 0.2
CCSER1-205ENST00000505073 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
CCSER1-205ENST00000505073 ATP8B2P98198 1209 aa16.32■□□□□ 0.2
CCSER1-205ENST00000505073 CWF19L2Q2TBE0 894 aaKnown RBP16.32■□□□□ 0.2
CCSER1-205ENST00000505073 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
CCSER1-205ENST00000505073 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
CCSER1-205ENST00000505073 RIC3Q7Z5B4 369 aa16.31■□□□□ 0.2
CCSER1-205ENST00000505073 SPATA31A1Q5TZJ5 1347 aa16.31■□□□□ 0.2
CCSER1-205ENST00000505073 KCPQ6ZWJ8 1503 aa16.31■□□□□ 0.2
CCSER1-205ENST00000505073 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
CCSER1-205ENST00000505073 PIGBQ92521 554 aa16.31■□□□□ 0.2
CCSER1-205ENST00000505073 CCDC9Q9Y3X0 531 aaKnown RBP16.3■□□□□ 0.2
CCSER1-205ENST00000505073 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
CCSER1-205ENST00000505073 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
CCSER1-205ENST00000505073 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
CCSER1-205ENST00000505073 EXOC6BQ9Y2D4 811 aa16.3■□□□□ 0.2
CCSER1-205ENST00000505073 PAPPAQ13219 1627 aa16.29■□□□□ 0.2
CCSER1-205ENST00000505073 CLCN1P35523 988 aa16.29■□□□□ 0.2
CCSER1-205ENST00000505073 ALDH1L1O75891 902 aa16.29■□□□□ 0.2
CCSER1-205ENST00000505073 ARXQ96QS3 562 aa16.29■□□□□ 0.2
CCSER1-205ENST00000505073 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
CCSER1-205ENST00000505073 TNS2Q63HR2 1409 aa16.28■□□□□ 0.2
CCSER1-205ENST00000505073 NBPF26B4DH59 902 aa16.28■□□□□ 0.2
CCSER1-205ENST00000505073 A1BGP04217 495 aa16.28■□□□□ 0.2
CCSER1-205ENST00000505073 NBPF14Q5TI25 921 aa16.28■□□□□ 0.2
CCSER1-205ENST00000505073 NBPF10Q6P3W6 841 aaKnown RBP16.28■□□□□ 0.2
CCSER1-205ENST00000505073 NBPF15Q8N660 670 aa16.28■□□□□ 0.2
CCSER1-205ENST00000505073 OTUD7AQ8TE49 926 aaPredicted RBP16.28■□□□□ 0.2
CCSER1-205ENST00000505073 WNK3Q9BYP7 1800 aa16.28■□□□□ 0.2
CCSER1-205ENST00000505073 LINS1Q8NG48 757 aa16.28■□□□□ 0.2
CCSER1-205ENST00000505073 C9orf78Q9NZ63 289 aaPredicted RBP16.28■□□□□ 0.2
CCSER1-205ENST00000505073 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
CCSER1-205ENST00000505073 PANK2Q9BZ23 570 aa16.27■□□□□ 0.2
CCSER1-205ENST00000505073 CHMP5Q9NZZ3 219 aa16.27■□□□□ 0.2
CCSER1-205ENST00000505073 SPATA31A5Q5VU36 1347 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms