RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 PNISRQ8TF01 805 aaKnown RBP22.29■■□□□ 1.16
SYNE4-207ENST00000505054 ARHGEF1Q92888 912 aaKnown RBP22.29■■□□□ 1.16
SYNE4-207ENST00000505054 SLC52A2Q9HAB3 445 aa22.29■■□□□ 1.16
SYNE4-207ENST00000505054 RPS6KA4O75676 772 aa22.28■■□□□ 1.16
SYNE4-207ENST00000505054 GYS1P13807 737 aa22.28■■□□□ 1.16
SYNE4-207ENST00000505054 CCDC87Q9NVE4 849 aa22.28■■□□□ 1.16
SYNE4-207ENST00000505054 VIRMAQ69YN4 1812 aaKnown RBP22.27■■□□□ 1.16
SYNE4-207ENST00000505054 RFC4P35249 363 aa22.27■■□□□ 1.16
SYNE4-207ENST00000505054 RUNDC1Q96C34 613 aa22.27■■□□□ 1.16
SYNE4-207ENST00000505054 BCS1LQ9Y276 419 aa22.27■■□□□ 1.16
SYNE4-207ENST00000505054 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
SYNE4-207ENST00000505054 A0A0G2JLW4 131 aa22.25■■□□□ 1.15
SYNE4-207ENST00000505054 HTATSF1O43719 755 aaKnown RBP22.25■■□□□ 1.15
SYNE4-207ENST00000505054 DCTN1Q14203 1278 aa22.25■■□□□ 1.15
SYNE4-207ENST00000505054 MCM10Q7L590 875 aa22.25■■□□□ 1.15
SYNE4-207ENST00000505054 PARP3Q9Y6F1 533 aa22.25■■□□□ 1.15
SYNE4-207ENST00000505054 RTF1Q92541 710 aaKnown RBP22.24■■□□□ 1.15
SYNE4-207ENST00000505054 DLG5Q8TDM6 1919 aa22.23■■□□□ 1.15
SYNE4-207ENST00000505054 SIPA1L3O60292 1781 aaPredicted RBP22.23■■□□□ 1.15
SYNE4-207ENST00000505054 DPEP1P16444 411 aa22.23■■□□□ 1.15
SYNE4-207ENST00000505054 TMPOP42166 694 aaKnown RBP22.23■■□□□ 1.15
SYNE4-207ENST00000505054 TEFQ10587 303 aa22.22■■□□□ 1.15
SYNE4-207ENST00000505054 RRP7AQ9Y3A4 280 aaKnown RBP22.22■■□□□ 1.15
SYNE4-207ENST00000505054 PTCD1O75127 700 aaKnown RBP22.21■■□□□ 1.15
SYNE4-207ENST00000505054 CRKLP46109 303 aaKnown RBP22.21■■□□□ 1.15
SYNE4-207ENST00000505054 RIPK4P57078 832 aa22.2■■□□□ 1.14
SYNE4-207ENST00000505054 ARHGAP27Q6ZUM4 889 aa22.2■■□□□ 1.14
SYNE4-207ENST00000505054 USP42Q9H9J4 1324 aaKnown RBP22.2■■□□□ 1.14
SYNE4-207ENST00000505054 SLC39A6Q13433 755 aa22.19■■□□□ 1.14
SYNE4-207ENST00000505054 THUMPD2Q9BTF0 503 aaKnown RBP22.19■■□□□ 1.14
SYNE4-207ENST00000505054 KCPQ6ZWJ8 1503 aa22.19■■□□□ 1.14
SYNE4-207ENST00000505054 WDR90Q96KV7 1748 aa22.18■■□□□ 1.14
SYNE4-207ENST00000505054 TNRC6CQ9HCJ0 1690 aaKnown RBP22.17■■□□□ 1.14
SYNE4-207ENST00000505054 APAF1O14727 1248 aa22.17■■□□□ 1.14
SYNE4-207ENST00000505054 TOMM70O94826 608 aa22.17■■□□□ 1.14
SYNE4-207ENST00000505054 KCNA3P22001 575 aa22.17■■□□□ 1.14
SYNE4-207ENST00000505054 APLP1P51693 650 aa22.17■■□□□ 1.14
SYNE4-207ENST00000505054 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
SYNE4-207ENST00000505054 SRP68Q9UHB9 627 aaKnown RBP22.17■■□□□ 1.14
SYNE4-207ENST00000505054 SBF1O95248 1867 aa22.17■■□□□ 1.14
SYNE4-207ENST00000505054 AFDNP55196 1824 aaKnown RBP22.16■■□□□ 1.14
SYNE4-207ENST00000505054 CCER2I3L3R5 266 aa22.16■■□□□ 1.14
SYNE4-207ENST00000505054 TRIM35Q9UPQ4 493 aa22.16■■□□□ 1.14
SYNE4-207ENST00000505054 DLEC1Q9Y238 1755 aa22.16■■□□□ 1.14
SYNE4-207ENST00000505054 UBR2Q8IWV8 1755 aa22.15■■□□□ 1.14
SYNE4-207ENST00000505054 NRXN2Q9P2S2 1712 aa22.15■■□□□ 1.14
SYNE4-207ENST00000505054 DDR1Q08345 913 aa22.15■■□□□ 1.14
SYNE4-207ENST00000505054 FKBP8Q14318 412 aa22.15■■□□□ 1.14
SYNE4-207ENST00000505054 PIM2Q9P1W9 311 aa22.15■■□□□ 1.14
SYNE4-207ENST00000505054 LMOD3Q0VAK6 560 aa22.14■■□□□ 1.13
SYNE4-207ENST00000505054 ZNF790Q6PG37 636 aa22.14■■□□□ 1.13
SYNE4-207ENST00000505054 FAM9BQ8IZU0 186 aa22.14■■□□□ 1.13
SYNE4-207ENST00000505054 MIER1Q8N108 512 aa22.14■■□□□ 1.13
SYNE4-207ENST00000505054 NMRK2Q9NPI5 230 aa22.14■■□□□ 1.13
SYNE4-207ENST00000505054 BTBD11A6QL63 1104 aa22.13■■□□□ 1.13
SYNE4-207ENST00000505054 KCNQ3O43525 872 aa22.13■■□□□ 1.13
SYNE4-207ENST00000505054 C9orf131Q5VYM1 1079 aa22.13■■□□□ 1.13
SYNE4-207ENST00000505054 TAF7Q15545 349 aaPredicted RBP22.12■■□□□ 1.13
SYNE4-207ENST00000505054 DALRD3Q5D0E6 543 aaKnown RBP22.12■■□□□ 1.13
SYNE4-207ENST00000505054 INTS5Q6P9B9 1019 aaKnown RBP22.12■■□□□ 1.13
SYNE4-207ENST00000505054 TTC5Q8N0Z6 440 aa22.12■■□□□ 1.13
SYNE4-207ENST00000505054 POLRMTO00411 1230 aaKnown RBP22.11■■□□□ 1.13
SYNE4-207ENST00000505054 ZNF496Q96IT1 587 aaPredicted RBP22.11■■□□□ 1.13
SYNE4-207ENST00000505054 SOS1Q07889 1333 aaPredicted RBP22.1■■□□□ 1.13
SYNE4-207ENST00000505054 RBM46Q8TBY0 533 aaKnown RBP22.1■■□□□ 1.13
SYNE4-207ENST00000505054 MIS18AQ9NYP9 233 aa22.1■■□□□ 1.13
SYNE4-207ENST00000505054 ZPR1O75312 459 aa22.09■■□□□ 1.13
SYNE4-207ENST00000505054 DNAJC10Q8IXB1 793 aa22.09■■□□□ 1.13
SYNE4-207ENST00000505054 KDM3BQ7LBC6 1761 aa22.09■■□□□ 1.13
SYNE4-207ENST00000505054 TM4SF1P30408 202 aa22.08■■□□□ 1.13
SYNE4-207ENST00000505054 COL15A1P39059 1388 aa22.08■■□□□ 1.12
SYNE4-207ENST00000505054 HEG1Q9ULI3 1381 aa22.08■■□□□ 1.12
SYNE4-207ENST00000505054 KDM2BQ8NHM5 1336 aa22.07■■□□□ 1.12
SYNE4-207ENST00000505054 TIAM2Q8IVF5 1701 aa22.07■■□□□ 1.12
SYNE4-207ENST00000505054 CHRNA5P30532 468 aa22.07■■□□□ 1.12
SYNE4-207ENST00000505054 USPL1Q5W0Q7 1092 aa22.07■■□□□ 1.12
SYNE4-207ENST00000505054 C16orf71Q8IYS4 520 aaPredicted RBP22.07■■□□□ 1.12
SYNE4-207ENST00000505054 VSIG10Q8N0Z9 540 aa22.07■■□□□ 1.12
SYNE4-207ENST00000505054 RNF181Q9P0P0 153 aa22.07■■□□□ 1.12
SYNE4-207ENST00000505054 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
SYNE4-207ENST00000505054 FMNL2Q96PY5 1086 aa22.06■■□□□ 1.12
SYNE4-207ENST00000505054 SCN7AQ01118 1682 aa22.05■■□□□ 1.12
SYNE4-207ENST00000505054 DNAJC5GQ8N7S2 189 aa22.05■■□□□ 1.12
SYNE4-207ENST00000505054 NARFQ9UHQ1 456 aa22.04■■□□□ 1.12
SYNE4-207ENST00000505054 ZC3H4Q9UPT8 1303 aaKnown RBP22.04■■□□□ 1.12
SYNE4-207ENST00000505054 FSTL1Q12841 308 aa22.03■■□□□ 1.12
SYNE4-207ENST00000505054 CCDC27Q2M243 656 aa22.03■■□□□ 1.12
SYNE4-207ENST00000505054 TSPYL4Q9UJ04 414 aa22.03■■□□□ 1.12
SYNE4-207ENST00000505054 CCDC88AQ3V6T2 1871 aa22.03■■□□□ 1.12
SYNE4-207ENST00000505054 NCBP3Q53F19 620 aaKnown RBP22.02■■□□□ 1.12
SYNE4-207ENST00000505054 BABAM1Q9NWV8 329 aa22.02■■□□□ 1.12
SYNE4-207ENST00000505054 ZBTB1Q9Y2K1 713 aa22.02■■□□□ 1.12
SYNE4-207ENST00000505054 PRAMEF22A3QJZ6 481 aa22.01■■□□□ 1.11
SYNE4-207ENST00000505054 CHL1O00533 1208 aa22.01■■□□□ 1.11
SYNE4-207ENST00000505054 EIF4A1P60842 406 aaKnown RBP22.01■■□□□ 1.11
SYNE4-207ENST00000505054 NFIXQ14938 502 aa22.01■■□□□ 1.11
SYNE4-207ENST00000505054 WWC1Q8IX03 1113 aa22■■□□□ 1.11
SYNE4-207ENST00000505054 ANKRD31Q8N7Z5 1873 aa22■■□□□ 1.11
SYNE4-207ENST00000505054 SNRPA1P09661 255 aaKnown RBP21.99■■□□□ 1.11
SYNE4-207ENST00000505054 RASSF7Q02833 373 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms