RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 USP17L2Q6R6M4 530 aa10.36□□□□□ -0.75
DEPDC1B-203ENST00000505017 USP17L1Q7RTZ2 530 aa10.36□□□□□ -0.75
DEPDC1B-203ENST00000505017 PLEKHM2Q8IWE5 1019 aa10.36□□□□□ -0.75
DEPDC1B-203ENST00000505017 C7orf43Q8WVR3 580 aa10.36□□□□□ -0.75
DEPDC1B-203ENST00000505017 AIDAQ96BJ3 306 aa10.36□□□□□ -0.75
DEPDC1B-203ENST00000505017 TXLNAP40222 546 aa10.35□□□□□ -0.75
DEPDC1B-203ENST00000505017 EFHC2Q5JST6 749 aa10.35□□□□□ -0.75
DEPDC1B-203ENST00000505017 TNS4Q8IZW8 715 aa10.35□□□□□ -0.75
DEPDC1B-203ENST00000505017 ZIC5Q96T25 663 aa10.35□□□□□ -0.75
DEPDC1B-203ENST00000505017 LRRC4BQ9NT99 713 aa10.35□□□□□ -0.75
DEPDC1B-203ENST00000505017 A0A1W2PNR3 127 aa10.34□□□□□ -0.75
DEPDC1B-203ENST00000505017 RNF225M0QZC1 329 aaPredicted RBP10.34□□□□□ -0.75
DEPDC1B-203ENST00000505017 DKK1O94907 266 aa10.34□□□□□ -0.75
DEPDC1B-203ENST00000505017 HOXB4P17483 251 aaPredicted RBP10.34□□□□□ -0.75
DEPDC1B-203ENST00000505017 FGFR3P22607 806 aa10.34□□□□□ -0.75
DEPDC1B-203ENST00000505017 MAP2K3P46734 347 aa10.34□□□□□ -0.75
DEPDC1B-203ENST00000505017 TBCELQ5QJ74 424 aa10.34□□□□□ -0.75
DEPDC1B-203ENST00000505017 WWC1Q8IX03 1113 aa10.34□□□□□ -0.75
DEPDC1B-203ENST00000505017 C1orf216Q8TAB5 229 aa10.34□□□□□ -0.75
DEPDC1B-203ENST00000505017 ATP9BO43861 1147 aa10.33□□□□□ -0.76
DEPDC1B-203ENST00000505017 SNRPNP63162 240 aaKnown RBP10.33□□□□□ -0.76
DEPDC1B-203ENST00000505017 SH3PXD2AQ5TCZ1 1133 aa10.33□□□□□ -0.76
DEPDC1B-203ENST00000505017 NLRP8Q86W28 1048 aa10.33□□□□□ -0.76
DEPDC1B-203ENST00000505017 SCARF2Q96GP6 870 aaPredicted RBP10.33□□□□□ -0.76
DEPDC1B-203ENST00000505017 CABP1Q9NZU7 370 aa10.33□□□□□ -0.76
DEPDC1B-203ENST00000505017 NSFL1CQ9UNZ2 370 aaKnown RBP10.33□□□□□ -0.76
DEPDC1B-203ENST00000505017 PHF24Q9UPV7 400 aa10.33□□□□□ -0.76
DEPDC1B-203ENST00000505017 ENAMQ9NRM1 1142 aa10.32□□□□□ -0.76
DEPDC1B-203ENST00000505017 PCDHGC4Q9Y5F7 938 aa10.32□□□□□ -0.76
DEPDC1B-203ENST00000505017 ITGB2P05107 769 aa10.31□□□□□ -0.76
DEPDC1B-203ENST00000505017 TNP2Q05952 138 aa10.31□□□□□ -0.76
DEPDC1B-203ENST00000505017 PSME1Q06323 249 aa10.31□□□□□ -0.76
DEPDC1B-203ENST00000505017 PROSER2Q86WR7 435 aaPredicted RBP10.31□□□□□ -0.76
DEPDC1B-203ENST00000505017 TPCN2Q8NHX9 752 aa10.31□□□□□ -0.76
DEPDC1B-203ENST00000505017 ZDHHC3Q9NYG2 299 aa10.31□□□□□ -0.76
DEPDC1B-203ENST00000505017 KLF15Q9UIH9 416 aa10.31□□□□□ -0.76
DEPDC1B-203ENST00000505017 BACH1O14867 736 aa10.3□□□□□ -0.76
DEPDC1B-203ENST00000505017 SLC9A9Q8IVB4 645 aa10.3□□□□□ -0.76
DEPDC1B-203ENST00000505017 GALNT6Q8NCL4 622 aa10.3□□□□□ -0.76
DEPDC1B-203ENST00000505017 NEDD1Q8NHV4 660 aa10.3□□□□□ -0.76
DEPDC1B-203ENST00000505017 GLMNQ92990 594 aa10.3□□□□□ -0.76
DEPDC1B-203ENST00000505017 L3MBTL2Q969R5 705 aa10.3□□□□□ -0.76
DEPDC1B-203ENST00000505017 DCDC2BA2VCK2 349 aa10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 ATXN7O15265 892 aaPredicted RBP10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 MAPTP10636 758 aaKnown RBP10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 BMP4P12644 408 aa10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 TEAD4Q15561 434 aa10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 NBPF1Q3BBV0 1214 aa10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 ARSJQ5FYB0 599 aaPredicted RBP10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 CCDC102BQ68D86 513 aa10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 KANK3Q6NY19 840 aa10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 STRN4Q9NRL3 753 aa10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 MKRN1Q9UHC7 482 aaKnown RBP10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 GGA1Q9UJY5 639 aa10.29□□□□□ -0.76
DEPDC1B-203ENST00000505017 EML1O00423 815 aa10.28□□□□□ -0.76
DEPDC1B-203ENST00000505017 NOS2P35228 1153 aa10.28□□□□□ -0.76
DEPDC1B-203ENST00000505017 FIGNL1Q6PIW4 674 aa10.28□□□□□ -0.76
DEPDC1B-203ENST00000505017 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
DEPDC1B-203ENST00000505017 DNMT3AQ9Y6K1 912 aaPredicted RBP10.28□□□□□ -0.76
DEPDC1B-203ENST00000505017 EFSO43281 561 aa10.27□□□□□ -0.77
DEPDC1B-203ENST00000505017 CD33P20138 364 aa10.27□□□□□ -0.77
DEPDC1B-203ENST00000505017 POTEAQ6S8J7 498 aa10.27□□□□□ -0.77
DEPDC1B-203ENST00000505017 TRIM50Q86XT4 487 aa10.27□□□□□ -0.77
DEPDC1B-203ENST00000505017 EDARADDQ8WWZ3 215 aa10.27□□□□□ -0.77
DEPDC1B-203ENST00000505017 TFIP11Q9UBB9 837 aaKnown RBP10.27□□□□□ -0.77
DEPDC1B-203ENST00000505017 GRIN2CQ14957 1233 aa10.26□□□□□ -0.77
DEPDC1B-203ENST00000505017 SLCO4C1Q6ZQN7 724 aa10.26□□□□□ -0.77
DEPDC1B-203ENST00000505017 DCAF5Q96JK2 942 aa10.26□□□□□ -0.77
DEPDC1B-203ENST00000505017 TSPAN10Q9H1Z9 355 aaPredicted RBP10.26□□□□□ -0.77
DEPDC1B-203ENST00000505017 GDF2Q9UK05 429 aaPredicted RBP10.26□□□□□ -0.77
DEPDC1B-203ENST00000505017 MAFBQ9Y5Q3 323 aaPredicted RBP10.26□□□□□ -0.77
DEPDC1B-203ENST00000505017 SFI1A8K8P3 1242 aa10.25□□□□□ -0.77
DEPDC1B-203ENST00000505017 C21orf2O43822 256 aa10.25□□□□□ -0.77
DEPDC1B-203ENST00000505017 TATP17735 454 aaPredicted RBP10.25□□□□□ -0.77
DEPDC1B-203ENST00000505017 SIX5Q8N196 739 aa10.25□□□□□ -0.77
DEPDC1B-203ENST00000505017 BEND7Q8N7W2 519 aaPredicted RBP10.25□□□□□ -0.77
DEPDC1B-203ENST00000505017 GOLGA6L1Q8N7Z2 621 aa10.25□□□□□ -0.77
DEPDC1B-203ENST00000505017 TSEN2Q8NCE0 465 aaKnown RBP10.25□□□□□ -0.77
DEPDC1B-203ENST00000505017 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
DEPDC1B-203ENST00000505017 KHNYNO15037 678 aaKnown RBP10.24□□□□□ -0.77
DEPDC1B-203ENST00000505017 FAM157BP0CG42 384 aa10.24□□□□□ -0.77
DEPDC1B-203ENST00000505017 EPXP11678 715 aa10.24□□□□□ -0.77
DEPDC1B-203ENST00000505017 FAM182BQ5T319 152 aa10.24□□□□□ -0.77
DEPDC1B-203ENST00000505017 SAMD5Q5TGI4 173 aa10.24□□□□□ -0.77
DEPDC1B-203ENST00000505017 LINC00114Q6XXX2 140 aa10.24□□□□□ -0.77
DEPDC1B-203ENST00000505017 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
DEPDC1B-203ENST00000505017 PALM3A6NDB9 673 aaPredicted RBP10.23□□□□□ -0.77
DEPDC1B-203ENST00000505017 A6NJR5 290 aa10.23□□□□□ -0.77
DEPDC1B-203ENST00000505017 NEURL1BA8MQ27 555 aa10.23□□□□□ -0.77
DEPDC1B-203ENST00000505017 ARAFP10398 606 aa10.23□□□□□ -0.77
DEPDC1B-203ENST00000505017 ATP1A2P50993 1020 aa10.23□□□□□ -0.77
DEPDC1B-203ENST00000505017 GPAT2Q6NUI2 795 aa10.23□□□□□ -0.77
DEPDC1B-203ENST00000505017 FCHSD1Q86WN1 690 aa10.23□□□□□ -0.77
DEPDC1B-203ENST00000505017 COL8A1P27658 744 aa10.22□□□□□ -0.77
DEPDC1B-203ENST00000505017 LRRC69Q6ZNQ3 347 aa10.22□□□□□ -0.77
DEPDC1B-203ENST00000505017 SERTM1A2A2V5 107 aa10.21□□□□□ -0.77
DEPDC1B-203ENST00000505017 M0R2N6 131 aa10.21□□□□□ -0.77
DEPDC1B-203ENST00000505017 PLA2G4EQ3MJ16 856 aa10.21□□□□□ -0.77
DEPDC1B-203ENST00000505017 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
DEPDC1B-203ENST00000505017 BTBD6Q96KE9 485 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms