RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 ZNF395Q9H8N7 513 aaPredicted RBP9.31□□□□□ -0.92
SSBP2-204ENST00000504985 RBM19Q9Y4C8 960 aaKnown RBP9.31□□□□□ -0.92
SSBP2-204ENST00000504985 PLCH2O75038 1416 aa9.31□□□□□ -0.92
SSBP2-204ENST00000504985 NAIPQ13075 1403 aa9.31□□□□□ -0.92
SSBP2-204ENST00000504985 MBD5Q9P267 1494 aa9.31□□□□□ -0.92
SSBP2-204ENST00000504985 SHANK2Q9UPX8 1470 aa9.31□□□□□ -0.92
SSBP2-204ENST00000504985 KDM6BO15054 1643 aa9.31□□□□□ -0.92
SSBP2-204ENST00000504985 ABCC1P33527 1531 aa9.3□□□□□ -0.92
SSBP2-204ENST00000504985 ZBBXA8MT70 800 aa9.3□□□□□ -0.92
SSBP2-204ENST00000504985 SOCS7O14512 581 aa9.3□□□□□ -0.92
SSBP2-204ENST00000504985 RNFT1Q5M7Z0 435 aa9.3□□□□□ -0.92
SSBP2-204ENST00000504985 CNTNAP3BQ96NU0 1288 aa9.3□□□□□ -0.92
SSBP2-204ENST00000504985 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
SSBP2-204ENST00000504985 CNTNAP3Q9BZ76 1288 aa9.3□□□□□ -0.92
SSBP2-204ENST00000504985 ADGRL2O95490 1459 aa9.3□□□□□ -0.92
SSBP2-204ENST00000504985 GPR37L1O60883 481 aa9.29□□□□□ -0.92
SSBP2-204ENST00000504985 SLURP2P0DP57 97 aa9.29□□□□□ -0.92
SSBP2-204ENST00000504985 ROCK1Q13464 1354 aa9.29□□□□□ -0.92
SSBP2-204ENST00000504985 DHX57Q6P158 1386 aaKnown RBP9.29□□□□□ -0.92
SSBP2-204ENST00000504985 FBXO45P0C2W1 286 aa9.28□□□□□ -0.92
SSBP2-204ENST00000504985 CCDC125Q86Z20 511 aa9.28□□□□□ -0.92
SSBP2-204ENST00000504985 CCDC136Q96JN2 1154 aa9.28□□□□□ -0.92
SSBP2-204ENST00000504985 ARHGEF12Q9NZN5 1544 aa9.28□□□□□ -0.92
SSBP2-204ENST00000504985 HECW2Q9P2P5 1572 aa9.28□□□□□ -0.92
SSBP2-204ENST00000504985 MAST1Q9Y2H9 1570 aa9.28□□□□□ -0.92
SSBP2-204ENST00000504985 CCDC141Q6ZP82 1450 aa9.27□□□□□ -0.92
SSBP2-204ENST00000504985 GIGYF1O75420 1035 aaPredicted RBP9.27□□□□□ -0.93
SSBP2-204ENST00000504985 RNF144AP50876 292 aaPredicted RBP9.27□□□□□ -0.93
SSBP2-204ENST00000504985 VWA5B2Q8N398 1253 aa9.27□□□□□ -0.93
SSBP2-204ENST00000504985 POLMQ9NP87 494 aaPredicted RBP9.27□□□□□ -0.93
SSBP2-204ENST00000504985 ZNF777Q9ULD5 760 aaPredicted RBP9.27□□□□□ -0.93
SSBP2-204ENST00000504985 PLEKHH2Q8IVE3 1493 aa9.27□□□□□ -0.93
SSBP2-204ENST00000504985 SV2AQ7L0J3 742 aa9.26□□□□□ -0.93
SSBP2-204ENST00000504985 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
SSBP2-204ENST00000504985 MAP3K4Q9Y6R4 1608 aa9.26□□□□□ -0.93
SSBP2-204ENST00000504985 C9orf84Q5VXU9 1444 aa9.26□□□□□ -0.93
SSBP2-204ENST00000504985 KIAA1107Q9UPP5 1409 aa9.26□□□□□ -0.93
SSBP2-204ENST00000504985 DIP2BQ9P265 1576 aa9.26□□□□□ -0.93
SSBP2-204ENST00000504985 RAB15P59190 212 aa9.25□□□□□ -0.93
SSBP2-204ENST00000504985 ZNF385CQ66K41 422 aaPredicted RBP9.25□□□□□ -0.93
SSBP2-204ENST00000504985 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
SSBP2-204ENST00000504985 CHIC2Q9UKJ5 165 aa9.25□□□□□ -0.93
SSBP2-204ENST00000504985 FANCAO15360 1455 aa9.25□□□□□ -0.93
SSBP2-204ENST00000504985 PLXNC1O60486 1568 aa9.25□□□□□ -0.93
SSBP2-204ENST00000504985 GLI2P10070 1586 aa9.25□□□□□ -0.93
SSBP2-204ENST00000504985 CFAP74Q9C0B2 1584 aa9.25□□□□□ -0.93
SSBP2-204ENST00000504985 BRPF1P55201 1214 aaPredicted RBP9.24□□□□□ -0.93
SSBP2-204ENST00000504985 ERVK-9P63128 1117 aa9.24□□□□□ -0.93
SSBP2-204ENST00000504985 NEUROD2Q15784 382 aa9.24□□□□□ -0.93
SSBP2-204ENST00000504985 LYSMD3Q7Z3D4 306 aa9.24□□□□□ -0.93
SSBP2-204ENST00000504985 ADAMTS8Q9UP79 889 aa9.24□□□□□ -0.93
SSBP2-204ENST00000504985 NCOA1Q15788 1441 aa9.24□□□□□ -0.93
SSBP2-204ENST00000504985 TSPOAP1O95153 1857 aa9.24□□□□□ -0.93
SSBP2-204ENST00000504985 ARHGEF15O94989 841 aa9.24□□□□□ -0.93
SSBP2-204ENST00000504985 GPC1P35052 558 aa9.24□□□□□ -0.93
SSBP2-204ENST00000504985 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
SSBP2-204ENST00000504985 CYLDQ9NQC7 956 aa9.24□□□□□ -0.93
SSBP2-204ENST00000504985 CUEDC1Q9NWM3 386 aaPredicted RBP9.24□□□□□ -0.93
SSBP2-204ENST00000504985 HNRNPMP52272 730 aaKnown RBP eCLIP9.23□□□□□ -0.93
SSBP2-204ENST00000504985 TRIM52Q96A61 297 aa9.23□□□□□ -0.93
SSBP2-204ENST00000504985 RRP7BPQ9NSQ0 103 aa9.23□□□□□ -0.93
SSBP2-204ENST00000504985 TRAPPC8Q9Y2L5 1435 aa9.23□□□□□ -0.93
SSBP2-204ENST00000504985 INO80Q9ULG1 1556 aaPredicted RBP9.23□□□□□ -0.93
SSBP2-204ENST00000504985 ZFYVE16Q7Z3T8 1539 aa9.22□□□□□ -0.93
SSBP2-204ENST00000504985 FGD1P98174 961 aa9.22□□□□□ -0.93
SSBP2-204ENST00000504985 NR1H3Q13133 447 aa9.22□□□□□ -0.93
SSBP2-204ENST00000504985 ZNF326Q5BKZ1 582 aaKnown RBP9.22□□□□□ -0.93
SSBP2-204ENST00000504985 TAF7LQ5H9L4 462 aa9.22□□□□□ -0.93
SSBP2-204ENST00000504985 EFCAB2Q5VUJ9 269 aa9.22□□□□□ -0.93
SSBP2-204ENST00000504985 WHAMMQ8TF30 809 aa9.22□□□□□ -0.93
SSBP2-204ENST00000504985 PCDHB9Q9Y5E1 797 aa9.22□□□□□ -0.93
SSBP2-204ENST00000504985 PPRC1Q5VV67 1664 aaKnown RBP9.21□□□□□ -0.93
SSBP2-204ENST00000504985 DENND4BO75064 1496 aaPredicted RBP9.21□□□□□ -0.94
SSBP2-204ENST00000504985 ADGRL1O94910 1474 aa9.21□□□□□ -0.94
SSBP2-204ENST00000504985 CD109Q6YHK3 1445 aa9.21□□□□□ -0.94
SSBP2-204ENST00000504985 ANKRD30AQ9BXX3 1397 aa9.21□□□□□ -0.94
SSBP2-204ENST00000504985 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
SSBP2-204ENST00000504985 MTMR14Q8NCE2 650 aa9.21□□□□□ -0.94
SSBP2-204ENST00000504985 TRAK2O60296 914 aa9.2□□□□□ -0.94
SSBP2-204ENST00000504985 FAM69CQ0P6D2 419 aa9.2□□□□□ -0.94
SSBP2-204ENST00000504985 GAS6Q14393 721 aa9.2□□□□□ -0.94
SSBP2-204ENST00000504985 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
SSBP2-204ENST00000504985 KIF15Q9NS87 1388 aa9.19□□□□□ -0.94
SSBP2-204ENST00000504985 A0A1W2PRU2 124 aa9.19□□□□□ -0.94
SSBP2-204ENST00000504985 CDC14CA4D256 554 aa9.19□□□□□ -0.94
SSBP2-204ENST00000504985 RNF20Q5VTR2 975 aa9.19□□□□□ -0.94
SSBP2-204ENST00000504985 GMCL1Q96IK5 515 aa9.19□□□□□ -0.94
SSBP2-204ENST00000504985 GRIP2Q9C0E4 1043 aa9.19□□□□□ -0.94
SSBP2-204ENST00000504985 KDM5CP41229 1560 aa9.19□□□□□ -0.94
SSBP2-204ENST00000504985 NEO1Q92859 1461 aa9.19□□□□□ -0.94
SSBP2-204ENST00000504985 PRICKLE2Q7Z3G6 844 aa9.18□□□□□ -0.94
SSBP2-204ENST00000504985 ATP7AQ04656 1500 aa9.18□□□□□ -0.94
SSBP2-204ENST00000504985 SCAPERQ9BY12 1400 aa9.18□□□□□ -0.94
SSBP2-204ENST00000504985 ANKRD50Q9ULJ7 1429 aa9.18□□□□□ -0.94
SSBP2-204ENST00000504985 UNC13BO14795 1591 aa9.17□□□□□ -0.94
SSBP2-204ENST00000504985 KDM5DQ9BY66 1539 aa9.17□□□□□ -0.94
SSBP2-204ENST00000504985 SCTRP47872 440 aa9.17□□□□□ -0.94
SSBP2-204ENST00000504985 SRSF11Q05519 484 aaKnown RBP9.17□□□□□ -0.94
SSBP2-204ENST00000504985 FBXO41Q8TF61 875 aa9.17□□□□□ -0.94
SSBP2-204ENST00000504985 ZMYND15Q9H091 742 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms